| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,855,625 | +C | intergenic (+116/‑50) | sppA → / → ansA | signal peptide peptidase SppA/asparaginase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,855,621 | 1 | . | C | 98.7% | 1861.9 / 13.2 | 541 | intergenic (+112/‑54) | sppA/ansA | signal peptide peptidase SppA/asparaginase |
| Reads supporting (aligned to +/- strand): ref base . (1/6); new base C (196/336); total (199/342) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 566 total aligned reads displayed.
TGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑CCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855483‑1855755 | ccTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑ccc < 1:10138087/140‑1 (MQ=255) ccTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑ccc < 1:628674/140‑1 (MQ=255) gACCGGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑ccccct < 2:9558352/140‑3 (MQ=255) ccTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑ccccctgc < 2:10168392/140‑5 (MQ=255) ccTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑ccccctgc < 1:7547355/140‑5 (MQ=255) cTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑ccccctgcc < 2:8772698/140‑6 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCt < 2:435527/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCt < 1:291192/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCt < 1:9124505/140‑1 (MQ=255) gcgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTc < 1:8450248/140‑1 (MQ=255) aCATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCt > 1:1247137/1‑133 (MQ=255) aCATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCAc > 1:8081262/1‑136 (MQ=255) cATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGtata > 2:8922045/1‑140 (MQ=255) cATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGtata < 1:1826270/140‑1 (MQ=255) cATGCGTTAAGTCGTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCGTCCCGCTGTTTCGCCCCATATTTCCGTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCGCACGtata < 2:7879164/140‑1 (MQ=255) aaGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTCTCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTg < 2:6784535/140‑1 (MQ=255) aGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAAACCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TACCCCTGCCTCACGTATATACTTTTGc > 2:8303734/1‑140 (MQ=255) ttGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCtt > 2:742235/1‑140 (MQ=255) tggaCTGAGTGGCCGACAGATCGTCGGCCACAGTAGTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATGTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTATTGCTCttt > 2:3613682/4‑140 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCttt < 1:3701424/140‑1 (MQ=255) cTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGat < 2:7196008/140‑1 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:3791323/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 2:1490530/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:2077974/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 2:2761661/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:5544392/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:1936390/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:7118975/1‑140 (MQ=255) tGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcat > 1:2530846/1‑140 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:8365893/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:1825234/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATAGATTACGTCGACGAATCCTCGTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:8611136/140‑1 (MQ=255) ccGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcattca > 1:3621951/1‑140 (MQ=255) aCAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatat < 2:5591613/140‑1 (MQ=255) aGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatca < 1:4556857/140‑1 (MQ=255) tcgtcgGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatcaata < 1:9238528/140‑1 (MQ=255) gCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGc > 1:4078561/1‑140 (MQ=255) attattTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCAGATTTCCGTATCCGCATAGTATCAGGTGCGC‑TCCCCCTTCCTCACGTATATACTTTTGCTCTTGCGCTATCATTCCGATCAATATGATGCactgg > 2:7620273/1‑136 (MQ=255) tatttattACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaa < 1:3149784/140‑1 (MQ=255) tataTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaa < 1:884544/140‑1 (MQ=255) aCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATg > 1:10826570/1‑124 (MQ=255) aCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAttt > 1:6127324/1‑140 (MQ=255) aCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAttt > 2:325886/1‑140 (MQ=255) gTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTAc > 1:4768539/1‑140 (MQ=255) gTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTAc < 2:6565535/140‑1 (MQ=255) gTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATGTAc < 2:2473122/140‑1 (MQ=255) tCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACg < 2:8964650/140‑1 (MQ=255) tCGACGAATCCTCGTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACg < 2:373816/140‑1 (MQ=255) gacgaATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGtt > 1:9535317/1‑140 (MQ=255) gacgaATCCTCTTCCCGCTGTTTCGCCCCATATGTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGtt < 2:4718349/140‑1 (MQ=255) ctCCTCTCCCCGCAGTGTCGCCCCATAGTTCCTTCTCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATAGACTTGTGCTCTTTCGCTATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTa < 2:9762319/139‑1 (MQ=255) tCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTac < 1:5006258/140‑1 (MQ=255) tCCTCTGCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTac < 1:3343112/140‑1 (MQ=255) gccTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTac < 2:5285840/139‑1 (MQ=255) ccTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTaca < 1:9783863/140‑1 (MQ=255) ccTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTaca < 2:4037737/140‑1 (MQ=255) ttCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg < 2:7760222/140‑1 (MQ=255) cGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg < 1:10014430/136‑1 (MQ=255) cGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg > 2:10014429/1‑136 (MQ=255) gTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCTATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCa > 1:7889707/1‑140 (MQ=255) tttCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:3445002/84‑1 (MQ=255) atatTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCa < 1:5713017/140‑1 (MQ=255) atatTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCa < 1:2263673/140‑1 (MQ=255) atatTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCa < 1:4369577/140‑1 (MQ=255) tatTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAg > 2:2129129/1‑140 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:6179147/65‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:8232567/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:5830353/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:3893140/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:3216529/140‑1 (MQ=255) tCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATg > 2:3055076/1‑79 (MQ=255) tCCGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCggg < 1:7709781/124‑1 (MQ=255) accGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGc > 1:340196/2‑140 (MQ=255) cctcATTGTATCATGTGCGC‑TCCCCCTGCCTCTCGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATTCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:1351250/137‑1 (MQ=255) ccGCCTAGTATCAGGTGCGCGC‑CCCCTGCCTCACGTATATACTTTTGCTCTTGCGATATCCTTCATATCAATATCATGCAAAAGAAATCACTTTACGGTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:4474937/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:10359149/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:3900567/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCAGATCAATATCATGCAAAAGAACTCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:3343756/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAACATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:10473608/140‑1 (MQ=255) gCATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAgg < 2:1291352/140‑1 (MQ=255) cATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatat > 2:9114835/1‑65 (MQ=255) cATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg < 1:5344011/140‑1 (MQ=255) cATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg > 2:58103/1‑140 (MQ=255) cATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg < 2:6516355/140‑1 (MQ=255) cATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg < 2:9300033/140‑1 (MQ=255) cATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg < 1:10695804/140‑1 (MQ=255) cATAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAATTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg > 2:4949159/1‑140 (MQ=255) aTAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCCATATCATGCAAAAGAAATCAATATACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGt > 2:1686685/1‑140 (MQ=255) aTAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACg > 1:6558926/1‑93 (MQ=255) aTAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGt > 2:2954320/1‑140 (MQ=255) tAGTATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGtt < 2:8056794/140‑1 (MQ=255) tATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaa < 2:2270554/78‑1 (MQ=255) tATCAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTtata > 1:1639712/1‑140 (MQ=255) cAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 1:742235/140‑1 (MQ=255) cAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 1:5284246/140‑1 (MQ=255) cAGGTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTGACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 2:7032841/140‑1 (MQ=255) ggTGCGC‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCg > 1:6829915/1‑140 (MQ=255) gcgc‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:3072917/47‑1 (MQ=255) gcgc‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCCTTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 2:108078/1‑140 (MQ=255) gcgc‑TCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 2:1175219/1‑140 (MQ=255) | TGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑CCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855483‑1855755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |