| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,204,490 | (A)7→8 | pseudogene (175/3632 nt) | CXP41_RS11705 → | DUF4132 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,204,483 | 1 | . | A | 94.7% | 1658.9 / 69.6 | 452 | pseudogene (168/3632 nt) | CXP41_RS11705 | DUF4132 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (15/9); new base A (233/192); total (249/203) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 486 total aligned reads displayed.
ATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑AAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204344‑2204617 | aTAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGagaa‑g < 1:8437181/140‑1 (MQ=255) ccAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑aaa‑aaaa < 1:5142999/140‑1 (MQ=255) aaCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑aaa‑aaaaac > 2:8252360/1‑138 (MQ=255) aCTGGAACTGAAATATAAAAAAGTCAAAACGCAGCTCAGTCATCGTCGCTGGCCGTGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑aaa‑aaaaaca < 2:4924746/140‑4 (MQ=255) aaaTATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCg > 1:1915865/1‑140 (MQ=255) gCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAAtttt > 2:10394143/1‑140 (MQ=255) gCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAAtttt > 1:6665014/1‑140 (MQ=255) aaCGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCAc < 2:9106273/140‑1 (MQ=255) aaCGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCAc < 1:1553870/140‑1 (MQ=255) cgccgcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTg < 2:1339828/140‑1 (MQ=255) cgccgcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTg < 2:1794611/140‑1 (MQ=255) gcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGt > 2:3333692/1‑140 (MQ=255) tCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTgg < 2:778576/140‑1 (MQ=255) cATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTc < 1:10474098/140‑1 (MQ=255) tcgCTGGCCGGGCGAACCAGTGTCCGTTAACACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCa < 2:7978659/140‑1 (MQ=255) gCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATc > 1:3568049/1‑140 (MQ=255) gCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATc > 1:345060/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 2:2250388/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 1:9162944/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 2:3708535/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 2:8413332/1‑140 (MQ=255) ggCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACg < 2:7223467/140‑1 (MQ=255) gCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGc < 2:8774191/140‑1 (MQ=255) ccGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCa < 2:9310023/140‑1 (MQ=255) ggCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑AAATAAAACATTGTCTGGCGTGATGAGTCTTTTTCACTGGAGTGGCAGTCCGCCAGCACGCCGGc > 1:1263220/1‑140 (MQ=255) gCGAACCAGTGTCCTTTATAACTGTAATTCACAACATTACTTTGGTTGATTAATTGCTACAAAAAGCTGAGAATA‑AAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGcc < 2:10802749/140‑1 (MQ=255) gCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGcc > 1:9978122/1‑140 (MQ=255) gCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGcc > 1:9335481/1‑140 (MQ=255) gCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGcc > 2:5428901/1‑140 (MQ=255) cGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCa < 2:4571225/140‑1 (MQ=255) aaCCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATc < 1:7806636/140‑1 (MQ=255) tgtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAATGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTg > 2:7900804/1‑140 (MQ=255) tgtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTg > 1:4686199/1‑140 (MQ=255) gtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCCTCAACTTGa > 2:393750/1‑140 (MQ=255) gTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCgg < 2:5576924/140‑1 (MQ=255) cACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATgag > 1:5626394/1‑82 (MQ=255) cACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAac > 1:5022072/1‑140 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac < 1:1826984/140‑1 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac > 1:7278523/1‑140 (MQ=255) tGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAAcaca < 1:6171418/140‑1 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 2:10180593/1‑140 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 2:4451438/1‑140 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa < 1:5299878/140‑1 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAAAATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 2:115765/1‑140 (MQ=255) tctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCt < 2:5343820/140‑1 (MQ=255) ctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTc > 1:7129553/1‑140 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCAc < 1:10397674/79‑1 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAt > 2:105249/1‑140 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAt > 1:10608079/1‑140 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAt > 1:10677282/1‑140 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc > 1:3967521/1‑140 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc > 1:262045/1‑140 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc > 2:2451728/1‑140 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCAGCAACTTGAGCGGCGCCCACAAACCCTCAATcccggc > 1:3034127/1‑140 (MQ=255) cATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcc < 2:8896522/140‑1 (MQ=255) cATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcc > 1:8260011/1‑140 (MQ=255) cATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcc < 1:6756564/140‑1 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTGTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcccgg > 1:8128531/1‑140 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑aaa‑aaaaac > 2:2097361/1‑39 (MQ=255) ggTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGAc > 2:3788081/1‑140 (MQ=255) ggTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGAc > 2:5180717/1‑140 (MQ=255) ggTGATGAATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGAc > 1:1696544/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCa < 2:9851157/73‑1 (MQ=255) atgaATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGt > 2:10711859/1‑75 (MQ=255) atgaATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:4540026/1‑140 (MQ=255) tgaATTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 2:6712718/140‑1 (MQ=255) aTTGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATggcgg < 1:6543031/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GCACA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:6513921/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCAc > 2:6943933/1‑57 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:61363/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:425100/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:976167/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:5536713/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:10169856/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:10794265/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:2250388/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:2447338/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:3087858/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:5907150/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:74053/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:8213592/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:8569393/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:3202970/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:1580771/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:10004462/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcgacg < 1:4299846/140‑1 (MQ=255) gCTACAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGgcgc > 1:9891113/1‑140 (MQ=255) aCAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGGGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCTCGCAGGCCATGAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACCATGGCGGGGCTAg > 2:5800895/1‑140 (MQ=255) aCAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAg > 1:321698/1‑140 (MQ=255) aCAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAg > 2:2990754/1‑140 (MQ=255) aCAAAAAGCTGAGAA‑GAAAA‑AAAACAATGTCTGGCGTTATGAGACTTTTTCACTGTAGTTGCACTCCGCCAACACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAg > 2:3483974/1‑140 (MQ=255) cAAAAAGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGc < 2:2700378/140‑1 (MQ=255) aaaaGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAAttt > 1:2056386/1‑45 (MQ=255) aaaaGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAATCCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCt > 1:2886768/1‑140 (MQ=255) aaGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGt > 2:761816/1‑140 (MQ=255) aGCTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGAGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTa > 2:9514212/1‑140 (MQ=255) cTGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATc > 2:7452843/1‑140 (MQ=255) tGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAATCCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGGATcg > 1:8892103/1‑140 (MQ=255) tGAGAA‑GAAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATcg < 1:5386051/140‑1 (MQ=255) agaa‑gaAAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATcgcg > 1:6444476/1‑140 (MQ=255) | ATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑AAA‑AAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204344‑2204617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |