| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,466,923 | (C)8→9 | intergenic (+242/‑123) | fadL → / → CXP41_RS12955 | long‑chain fatty acid transporter FadL/protein YfdF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,466,915 | 1 | . | C | 96.9% | 754.9 / 15.6 | 229 | intergenic (+234/‑131) | fadL/CXP41_RS12955 | long‑chain fatty acid transporter FadL/protein YfdF |
| Reads supporting (aligned to +/- strand): ref base . (0/7); new base C (34/188); total (34/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 316 total aligned reads displayed.
TTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCA > NZ_CP025268/2466778‑2467046 | ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc > 1:9718177/1‑140 (MQ=255)ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc > 2:9775579/1‑140 (MQ=255)ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc < 2:714519/140‑1 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccc < 1:6402706/140‑1 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccc < 1:1907326/140‑1 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccc < 1:2500/140‑1 (MQ=255) tGCAAACAGCCTGTTGGCAGCGTGCCCTATCAAATCCATAAGCGGTATCCACAGACAAACCTGAAGGGAACGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTGTTCTGCATTTCCAGGATACT‑‑ccc < 2:7739551/140‑1 (MQ=255) gCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGCAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cccc < 2:619544/140‑1 (MQ=255) gCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cccc < 1:9866959/140‑1 (MQ=255) cAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCTGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGATTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccc < 2:8780151/140‑1 (MQ=255) caCAGCCTGATGGCAGCGTGCCCTGTCTCATCCATTAGCGGTATCCACAGACAAACCTGAAGGGAATGTCATATTTTCAGGCGTTCTGATCGTCCTTCTCCAAGCTTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc < 2:5795842/139‑1 (MQ=255) accAGCCTGTTCGCAGCTCGCCCTTTCAACGCAATCAGCCGTATCCACAGCCAAACCTGAAGTGAAAGGCAAATTTCCAGGCGTACTGCTCGACCTTCTCAAAGAGTTTACGTTTCTGCATTTCCAGGATACT‑‑ccccccc < 2:8340648/138‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc < 1:7517615/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc < 1:10774399/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc < 2:8900066/140‑1 (MQ=255) aaCAGCCGGGTGGCAGCTTGCCCTTTCAAATCAATACGCGGTATCCACAGACAAACCAGAACGGAACGGCAGAATTTAAGGCGTTCTGCTCGTCCTTCTCACAGAGTTTACTTTACTGCATTCCCAGGATACT‑‑ccccccc < 2:5503615/140‑1 (MQ=255) aCAGCCTGTTGGCAGCTTTCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑c < 2:3230398/140‑1 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑cc < 1:10001970/140‑2 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑cc < 1:8149556/140‑2 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑cc < 1:1349942/140‑2 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑cc < 1:775931/140‑2 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑cc < 2:4655727/140‑2 (MQ=255) cAGACTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTAAGGAGTTCTGCTCGTCCTTCTCAAATATTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑cc < 2:2359919/140‑2 (MQ=255) ccTGTTGGCAGCTTGCCCTTTCAAATCAATTAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAACGTGTTTTCTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑cctgg < 2:4014735/140‑5 (MQ=255) ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑cctgg < 1:6531424/140‑5 (MQ=255) tGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTAtt < 2:7587265/140‑1 (MQ=255) tGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTAtt < 1:4796835/140‑1 (MQ=255) ggCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATTTTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtg < 2:9871051/140‑1 (MQ=255) ggCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtg < 1:5511280/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg < 1:10232642/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg < 1:10659445/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg < 1:1134834/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCGTAAGGGAAAGGCATATTTTCAGGCGTTCTGCACGTCCTACTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg < 1:2562440/140‑1 (MQ=255) aGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCCCCCCC‑CTGGCTATtgtg < 1:7212842/140‑1 (MQ=255) gCTTGCCCTTTCAAATCAATCAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTgcg < 1:5411929/140‑1 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg > 1:6796737/1‑138 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg < 2:6796736/138‑1 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTgcg < 1:4312948/140‑1 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTgcg > 1:871841/1‑140 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTgcg < 1:915099/140‑1 (MQ=255) gCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCa > 2:3735169/1‑140 (MQ=255) gCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCGCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CGGGCGATGGTGCGCTCa > 2:10137876/1‑140 (MQ=255) ttCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATacac < 2:6291333/140‑1 (MQ=255) cAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCCCCCCC‑CTGGCTATTGTGCGCTCATACACt < 2:1810519/140‑1 (MQ=255) cAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTc < 2:1123386/140‑1 (MQ=255) aaTCAATAAGCGGTATCCACAGACACACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATGTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCaa < 2:9925040/140‑1 (MQ=255) cAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc‑cctgg > 1:892053/1‑110 (MQ=255) aaTAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTa < 2:5656104/140‑1 (MQ=255) aGCGTTATCCAAAGACAAACATGATGGGAAAGTATTATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTATGCATTTCCAGGATACTC‑CCCCCCC‑CTGTCTATTGTGCGCTCATACACTCAAATTAAAGa < 2:4431155/140‑1 (MQ=255) gctgTATCCACAGACAAACCTGAAGGTAAAGGCATATTTTCAGGAGTTCTGCTCGTCCTTCTCATAGAGTTTACTTTTATGCATTTCCAGGATACT‑‑CCCCCCCACTGTCTATTGTGCGCTCATACACTCAAAGTAAAGAt < 2:5292724/137‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:10473189/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:5119771/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:7175256/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:1499804/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTATGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:2491404/140‑1 (MQ=255) ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAg > 1:10509423/1‑140 (MQ=255) gTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccc < 2:9486600/96‑1 (MQ=255) aTCCACAGACAAACCTGAAGGTAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt < 2:1367955/140‑1 (MQ=255) aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt < 1:2905634/140‑1 (MQ=255) aaaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat > 1:5998604/1‑140 (MQ=255) aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTAtt > 2:660335/1‑97 (MQ=255) aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg < 2:8568798/100‑1 (MQ=255) aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg > 1:8568799/1‑100 (MQ=255) aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccccc > 2:10500509/1‑87 (MQ=255) aCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCGATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg > 1:4455603/1‑139 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCCAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:6211686/140‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 2:6985368/140‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:4174804/140‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:1814682/140‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:935397/140‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 2:10240397/140‑1 (MQ=255) aaGGGACAGGCAACGCTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACGTTTCTGCCTGTCCAGGCTACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAAGTACAGATAGGTTCTAAATAAATGAGCGtt < 2:8210585/140‑1 (MQ=255) aaaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccc < 2:217321/74‑1 (MQ=255) aaaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑ccccc > 1:217321/1‑74 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 1:5717115/140‑1 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 2:2879015/140‑1 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 1:3735169/140‑1 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAAATAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 2:10767919/140‑1 (MQ=255) aGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt > 1:6823941/1‑116 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATTCTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:3594186/140‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 1:3844314/140‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 1:3387600/140‑1 (MQ=255) cccagatTTTCAGCCGTTCTGCGCGTCCTACTCACAGAGTTTACTTATCTGCATCTCCATGAGACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAAATACAGATAGCTTCTAAATAAATGAGCGTTTTTTGATa < 2:7457581/135‑1 (MQ=255) gCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg < 1:8638710/140‑1 (MQ=255) gCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg < 2:4925360/140‑1 (MQ=255) gCATATTTTCAGGCGTTCTGCTCGACCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg < 1:7162061/140‑1 (MQ=255) cATATTTTCAGGCGTTCTGCACGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt < 1:10855505/140‑1 (MQ=255) atTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 1:1613420/140‑1 (MQ=255) ttttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAt < 2:5998604/140‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 2:6994529/140‑1 (MQ=255) ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:4156112/98‑1 (MQ=255) ttCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg < 1:10578213/70‑1 (MQ=255) ttCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATtgtg > 2:10578212/1‑70 (MQ=255) tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa < 1:8819637/140‑1 (MQ=255) tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa > 2:2593864/1‑140 (MQ=255) cTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTc < 1:3073956/81‑1 (MQ=255) ccTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa > 2:6385388/1‑112 (MQ=255) tACTTTTCTGCATTTCCAGGATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:9249287/99‑1 (MQ=255) catCCAGCATACT‑‑CCCCCCCACTCGCTATTTTGCGCTCATACACTCAAAAGAAAGATAGGTACTAAATAAATAAGAGTTTTTTGATAGTATATTTAATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATaa < 2:8506079/138‑1 (MQ=255) tggATACTC‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACACAAATTAAAGATAGGTTCTAAATAACTGAGCGTTTTTAGATAGTCTATTTAATTAGGTAATATATCTTTGTAACAAATCAACCAAATTGGAATAAAATct < 2:5703432/139‑2 (MQ=255) | TTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCC‑CTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCA > NZ_CP025268/2466778‑2467046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |