| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,773,671 | (C)5→6 | intergenic (+161/‑55) | yfjQ → / → yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,773,666 | 1 | . | C | 96.3% | 1829.6 / 56.3 | 575 | intergenic (+156/‑60) | yfjQ/yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (19/2); new base C (367/183); total (388/187) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.96e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 624 total aligned reads displayed.
CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑CCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 | cGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCg < 1:5257659/140‑1 (MQ=255)cGTAGTTAATATCGGACCCCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAAGCCCCCGGTTATAGCTTTTACCCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCg < 1:6060525/140‑1 (MQ=255) gttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑ccc‑c < 1:8531091/140‑1 (MQ=255) ttAATCTCGGACACCACCTGGCCGCATCGCTATGTGCTCGAGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTGGCAGAAATAAAAAATAGTTGCTGCGTTGTCCATACCCTGTCCG‑ccc‑cc < 2:5880599/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAATTAATAAATAGTTTCTGCGTTGGCCATACCCTGTCCG‑ccc‑cc > 1:2800472/1‑140 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑ccc‑cc < 1:2224768/140‑1 (MQ=255) ctactctCGGCCACCACCGGACCGCATCGCTATCTGCTCGTGTGCCACAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTGTGCAGAAACAAAAAATAGTTTCTGCGTTGGCCATACCCTGACCG‑ccc‑cc < 2:10472079/134‑1 (MQ=255) tatCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑ccc‑ccctct < 1:9507297/140‑5 (MQ=255) tatCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGATTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑ccc‑ccctct < 2:6928089/140‑5 (MQ=255) tCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAATTAAAAATTAGTTTCTGCGTTGTGCATACCCTGTGCG‑ccc‑ccctgggt > 1:4655962/1‑134 (MQ=37) tCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCttt < 1:8978620/140‑1 (MQ=255) ggACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGGTACATCTGGCTTTTGCAGAAATTAAATATAGTTTATGCGTTGTCCCTACCCTGTCCGACCC‑CCTCttgca > 1:10000680/1‑137 (MQ=25) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCGTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAg > 1:2621271/1‑140 (MQ=255) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTGATAGCTTTTTTCCCCCGTTACATCTGGCTTTTGCAGAAATAAAATTTAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCGCTGTAAAGTaag > 2:2716583/1‑139 (MQ=255) gTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGTTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCAcat < 2:10025525/140‑1 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCAGCCCC‑CCTCTTTAAAGTAATCAcatcatgt > 2:9327688/1‑138 (MQ=255) tATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTtcagtc > 2:6174159/1‑140 (MQ=255) tATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGGTGTCCATACCCTGTCCG‑CCCGCCTCTTTAAAGTCATCCCATCATTGtcagtc > 2:9452474/1‑140 (MQ=21) gCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCCGAAATAAAAAATAGTTTCTGCGGTGTCCATACCCTGTCGGCCCC‑CCTCGTTGTGGTAATCTCTTCATTTtcggtcaggtc > 1:6421974/1‑137 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 2:1039657/140‑1 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:4335491/140‑1 (MQ=255) tCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAACTAACAAATAGTTTCTGCGTTGTCCATTCCCTGTCCGCCCC‑CCTCTGTAAAGGTATCACATCATTTTCAGTCCGTTAAc > 2:7723549/1‑140 (MQ=255) tCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGGTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaag > 1:6640793/1‑139 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTtca > 1:3435620/1‑128 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAGAGTAATCACATCATTTTCAGTCAGTTTACttt > 1:8369996/1‑140 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAAGttt > 1:716451/1‑140 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCAGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCCGTCAGTTAACttt > 2:1232815/1‑140 (MQ=255) gtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTc < 1:9250633/140‑1 (MQ=255) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTtc < 1:1395770/124‑1 (MQ=255) tgCCTCAATCCCCCGGTTATAGCGTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAAGAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCGCTGTAAAGGAATCCCATCATTGTCAGGCAGTTTACTTTcc > 1:3562108/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGACATAAAAAATAGTTTCTGCGTTGTCCATAACCTGTCCGCCCC‑CCACTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTg > 2:6674087/1‑140 (MQ=18) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTGTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTGTAAAGTAATCACATCATGTTCAGTCAGTTAACTTTCCTg > 1:1918758/1‑140 (MQ=255) tCACTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTATTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACGTTCCTGga < 2:8659734/140‑1 (MQ=18) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGCCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGaa < 2:4576829/140‑1 (MQ=255) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAAGAAAAAAGAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTGTAAAGTAATCACATCATTGTCAGTCAGTTAACTTTCCTGgagag > 1:8120920/1‑139 (MQ=18) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 2:8922715/140‑1 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 2:5265888/140‑1 (MQ=255) ccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtct > 2:3383679/1‑140 (MQ=255) cccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCGTTAAAGTAATCACAACATATTCAGTCAGTTAACTTTCCTGGAGAAtctc > 1:236598/1‑140 (MQ=255) cGGTTATANCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCNGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctg > 1:5814799/1‑139 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCGCGTTAAAGTAATCACATCATTTTCAGTCAGTTAAGTTTCCTGGAGAAtctctc > 1:2060556/1‑140 (MQ=18) taGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGaca < 2:5056832/140‑1 (MQ=255) tttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGgag > 1:2915328/1‑121 (MQ=255) tttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGgag < 2:2915328/121‑1 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCa > 1:9679989/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTtcagtc < 1:10731493/102‑1 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctct < 1:8495614/126‑1 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:7836252/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 2:9549620/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGGAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc > 2:1752985/1‑123 (MQ=255) ccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTGTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgcc > 2:3800011/1‑140 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGac > 1:5727501/1‑125 (MQ=255) ttACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCAGACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACgccgcc < 1:2972884/140‑1 (MQ=255) tCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGAc > 2:5415540/1‑140 (MQ=255) tttGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctgg < 1:1751840/140‑1 (MQ=255) ttGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTATTGTAATCACCTCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctggc > 2:8197879/1‑140 (MQ=14) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctggct > 1:3190527/1‑140 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 1:9119555/140‑1 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 1:10190795/140‑1 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 1:6291487/140‑1 (MQ=255) aTAAAAAATAGTTTCTGCGTGGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCAGAACGCCGCCCTGACCGGCTggctgtcaggc > 2:8503518/1‑140 (MQ=14) aaaaaTAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 1:6939339/140‑1 (MQ=255) aaaaaTAGTTTCGGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 1:9398807/140‑1 (MQ=255) aaTAGTTTCTGCGTTGTCCATTCCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACATGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 2:7282452/140‑1 (MQ=255) tAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTg > 1:10372620/1‑140 (MQ=255) tAGTTTCTGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTg > 2:2643064/1‑140 (MQ=255) tGCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTtcagtc > 2:9866699/1‑57 (MQ=11) gCGTTGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAg < 2:8783139/140‑1 (MQ=255) tGTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGt < 2:1955002/140‑1 (MQ=255) gTCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTc > 2:4374133/1‑140 (MQ=255) tCCATACCCTGTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCt > 2:5661772/1‑140 (MQ=255) aTACCCTGTCCGCCCC‑CCTCTATAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGt < 1:7718033/140‑1 (MQ=255) gTCCGCCCC‑CCTCTTTATAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCgggg > 2:8021514/1‑139 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTCATCCCATCCTTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATCATCCGCCGTCTGGTTGCgggg > 2:10700230/1‑139 (MQ=14) gTCCGCCCC‑CCTCTTTAAAGTCATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:4000958/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc > 2:5805593/1‑65 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc > 1:756755/1‑61 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGacac < 2:2224786/72‑1 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGaca > 2:1169057/1‑71 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGac > 2:3149721/1‑70 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2514389/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1544069/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2388221/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3132653/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1269060/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1099397/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:10564492/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2070119/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:550593/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1468941/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:6020982/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8723084/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:4802649/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:9797982/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:4182072/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3971690/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:10317098/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt < 2:3547594/140‑1 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGGCTGGTTGCGGGt > 2:3010946/1‑140 (MQ=255) gTCCGCCCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCGGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:5024601/1‑140 (MQ=255) | CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑CCC‑CCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |