| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,016,563 | +C | intergenic (‑19/+28) | yqeB ← / ← yqeC | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB/selenium cofactor biosynthesis protein YqeC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,016,562 | 1 | . | C | 98.7% | 1873.6 / 13.2 | 550 | intergenic (‑18/+29) | yqeB/yqeC | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB/selenium cofactor biosynthesis protein YqeC |
| Reads supporting (aligned to +/- strand): ref base . (6/1); new base C (201/337); total (210/340) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.37e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.87e-01 | |||||||||||
Only 100 of 565 total aligned reads displayed.
TCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑T‑CTTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCA > NZ_CP025268/3016423‑3016696 | tCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGata‑t > 2:2408098/1‑140 (MQ=255)tCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGata‑t > 1:822521/1‑140 (MQ=255)tCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGata‑t > 1:8550127/1‑140 (MQ=255) gcACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCa < 2:6831706/140‑1 (MQ=255) cACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCTCCATAGCAAACGGACAATTTTTCTCTTAGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAg > 2:63982/1‑140 (MQ=255) aaCATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAAc < 2:3680790/140‑1 (MQ=255) aTTTGTGCAGTATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTTCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGTATA‑TCCTTTCAGTAACCCg < 1:4382259/140‑1 (MQ=255) tttGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCgg < 2:9076213/140‑1 (MQ=255) ttGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGa > 1:2496631/1‑140 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAg < 2:3061090/129‑1 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAAt > 2:7481517/1‑140 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAAt > 2:6261857/1‑140 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAAt > 1:3335179/1‑140 (MQ=255) gCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCNAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATAc > 1:10055807/1‑140 (MQ=255) gCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATAc > 2:5862742/1‑140 (MQ=255) gCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCg < 1:4341634/140‑1 (MQ=255) cGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGACAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGACTACCCGGGCCgc > 2:1511636/1‑139 (MQ=255) cGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCgc > 2:6676513/1‑139 (MQ=255) cGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCgc > 1:8085688/1‑139 (MQ=255) gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTa < 1:6832278/140‑1 (MQ=255) gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTa < 1:3130431/140‑1 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 2:4443098/1‑140 (MQ=255) tCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTca > 1:9374457/1‑140 (MQ=255) tCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTca < 1:1720051/140‑1 (MQ=255) tCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTca < 2:6930220/140‑1 (MQ=255) gAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTGGAGTTTTGCTGCCTCTGTGTAATTATTCTTACGAACCTCTATGGATA‑TGATTTCAGTATGCCGGACTTCCCGGGCCGCTTATTctca > 2:10397301/1‑140 (MQ=255) aGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACaa > 1:562257/1‑140 (MQ=255) ccTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAAt < 1:2946485/140‑1 (MQ=255) cGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTg > 1:6950938/1‑140 (MQ=255) gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg < 1:1047536/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAATCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTTACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 2:8036497/140‑1 (MQ=255) tATCAACAAATTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTGTGCAGCCTCTGTGAAAATAGTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 2:5480826/140‑1 (MQ=255) tCAACAATTTGCGCAATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTTTGAAAATATTCATACCAACCTCAATGGATA‑TAATTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAAACTGcgcgcg > 1:593843/1‑140 (MQ=255) caacaaTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGa < 1:8782049/140‑1 (MQ=255) acgtGCGCCAGAGCAAACTGACCACTTTGCTCTTCGAGTTTGGCAGCCTCTGTGAAAATATTCCTACCAACCTCAATGGATA‑TCCCTGCAGTAACCCGGAAGACCCGGGCCGCTAATGCACAAATCTGCGCGCGATTGCa < 2:8924334/137‑1 (MQ=255) aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa < 2:4990285/140‑1 (MQ=255) aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa < 1:7868513/140‑1 (MQ=255) tttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAg > 2:9262000/1‑140 (MQ=255) ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCCACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg < 1:9739153/140‑1 (MQ=255) ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg < 2:4217435/140‑1 (MQ=255) tGCGCCATAGCAAACGGACACTTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 1:9552356/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:2746112/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:2115346/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTGTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:8800162/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:7066558/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:5216512/140‑1 (MQ=255) gcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGt > 2:7314812/1‑140 (MQ=255) cATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTc < 1:7400382/140‑1 (MQ=255) aGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTCATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTg > 2:8567537/1‑140 (MQ=255) aaaCGGACAATTTCGCTCGTCGAGTTTGGCAGCCTCTGAGAAAATATTCATACCAACCTCAATGGATA‑TCCTGTCAGTAACCCGGACTCCCCGGGCCGCGAATTCCCAAATCTGCGCGCGAGTGCAGGATGTTCTTGtat < 2:1406657/140‑1 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCACTGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc < 2:7194848/140‑1 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc < 1:4528814/140‑1 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc < 1:7231008/140‑1 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTACTTGTATATCGcc > 2:10460659/1‑140 (MQ=255) cAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGccc < 2:5660811/140‑1 (MQ=255) aTTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCccag > 1:8962869/1‑140 (MQ=255) ctctTCGATTTGTGCAGCCTCTGTGAAAATATTCATACCAACCACCATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGTCCGCTAATTCACAAATCTGCGCGCGATTGAAGGATGTTCTTGTATATCGCCCAGCCAGAt < 2:6057790/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCACCCTCAATGGATA‑TCCTTTCAGGAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 2:6536349/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATT‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATAGCCCAGCCAGAt < 2:2008038/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:2045033/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:2357496/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 2:9465036/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:4746682/140‑1 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct > 2:4634895/1‑140 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TACTTTCAGTAACCCGGAATACCCGGGACGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct > 1:3817661/1‑140 (MQ=255) ttGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgt < 1:2637002/140‑1 (MQ=255) cAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgtcgt < 1:5372787/140‑1 (MQ=255) aGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACACATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCgtg < 1:141169/140‑1 (MQ=255) tgtgAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGttgttg < 2:3897564/140‑1 (MQ=255) tgtgAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGttgttg < 1:4028226/140‑1 (MQ=255) gtgAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:10189065/94‑1 (MQ=255) gtgAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTc > 2:9676476/1‑97 (MQ=255) gtgAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgtcg > 1:5235413/1‑131 (MQ=255) tgAATATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 2:9885212/140‑1 (MQ=255) tgAAAATATTCATACCAACCTCACTGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 2:10163947/140‑1 (MQ=255) tgAAAATATTCATACCAACCTCAATGGATA‑TCCTGTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 1:1309769/140‑1 (MQ=255) aaTATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 2:4372414/113‑1 (MQ=255) tatTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGtt > 1:4971881/1‑140 (MQ=255) ttCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGa > 1:4851385/1‑140 (MQ=255) ttCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGa > 1:659382/1‑140 (MQ=255) cATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGcc > 1:7739774/1‑111 (MQ=255) cATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAg > 1:6180275/1‑140 (MQ=255) cATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTGGTATATCGCCCAGCCAGAATGCCTCTACGTCGTGTTGTGGCAGCGGTTGAAg > 2:1709659/1‑140 (MQ=255) ccAACCTCAATGGATA‑TCCTTTCAGTTACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCATCGGTTGAAGGAGc < 1:5761460/140‑1 (MQ=255) ccAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGc < 2:10673145/140‑1 (MQ=255) ccAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGc < 1:9264334/140‑1 (MQ=255) cAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCt > 2:3224660/1‑140 (MQ=255) aaCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTc > 1:3486177/1‑140 (MQ=255) aCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg > 1:6767040/1‑73 (MQ=255) aCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg > 1:1998691/1‑73 (MQ=255) aCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg < 1:7539861/140‑1 (MQ=255) aCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg > 2:7830876/1‑140 (MQ=255) ccTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 1:1083440/62‑1 (MQ=255) ccTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc > 1:10337690/1‑140 (MQ=255) ccTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc > 1:3635922/1‑140 (MQ=255) aaTGGATAGC‑CTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGAAGCGGTTGACGGAGCTCGCTTtg > 2:1861062/1‑140 (MQ=255) aaTGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtg > 2:3484437/1‑140 (MQ=255) aTGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCGTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtgt > 2:10027773/1‑140 (MQ=255) aTGCATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCAAAAATCTGCGCGCGATTGCAGCATGTTCTAGTATATCGCCCAGCCAGATTGACTCTACGTAGTGTAGTTGCAGCGGTTGAAGGAGCTCGCTTtgt > 2:10844177/1‑140 (MQ=255) gATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCa < 1:8309065/140‑1 (MQ=255) | TCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑T‑CTTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCA > NZ_CP025268/3016423‑3016696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |