| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 8 (0.010) | 540 (0.890) +GCC |
126/260 | 0.3 | 98.6% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 8 (0.010) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 572 total aligned reads displayed.
AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑CC‑ATGTT‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTA > NZ_CP025268/3864306‑3864575 | gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCTATGGCGATTTGGGTCAGCATCTTATCCGCGTGGTTGCTGAACATCGGGATCGAGTTTTGCGGTAAAACCTTGTCAATCAGACCTCCGCCC‑ATGTTgccca < 2:7035871‑M1/140‑6 (MQ=255) gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgccca < 2:8980738‑M1/140‑6 (MQ=255) cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccac < 2:10199674‑M1/140‑7 (MQ=255) cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccac > 1:9620556‑M1/1‑134 (MQ=255) cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccac < 1:6811624‑M1/140‑7 (MQ=255) ggAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccacc < 2:6148870‑M1/140‑8 (MQ=255) gAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccacca > 1:4130590‑M1/1‑132 (MQ=255) aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacac < 2:1914289‑M1/140‑12 (MQ=255) aCCACGAAGTACAGCAGGGTAAAGCACAACCCGATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacacc > 1:8959103‑M1/1‑128 (MQ=255) ccACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacacca < 1:2403100‑M1/140‑14 (MQ=255) aCGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaa < 1:10318220‑M1/140‑16 (MQ=255) aCGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaa < 2:417867‑M1/140‑16 (MQ=255) cGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaag < 2:8847397‑M1/140‑17 (MQ=255) tACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagata > 1:5031035‑M1/1‑119 (MQ=255) tACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagata > 1:7275513‑M1/1‑119 (MQ=255) agcagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacat > 2:1144829‑M1/1‑116 (MQ=255) gcagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacatt < 1:7575320‑M1/140‑26 (MQ=255) agGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGGTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacagtac < 2:3452793‑M1/140‑28 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacgg > 1:8189667‑M1/1‑111 (MQ=255) ggTAAAGCACAACCCAATGGCGATCTGGGTCAGCATCATATCCGCGTGGTTGCTGAACCTCGGGATCCAGTTGTGCGGTAAAACCTAGTCAATCAGCCCTCCGCCC‑CTGTTgcccacctcaccagggagatacctgacgg > 2:10463160‑M1/1‑111 (MQ=255) gTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggt < 1:276902‑M1/140‑31 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtc > 2:244837‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtc > 1:5910542‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtc > 2:9617307‑M1/1‑109 (MQ=255) aaGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcga > 1:7052429‑M1/1‑107 (MQ=255) cacaACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacat > 1:5542993‑M1/1‑104 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattga > 2:4327090‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattga > 2:128528‑M1/1‑101 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag < 1:9804046‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag < 2:2579592‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag < 2:3368728‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag > 1:8493594‑M1/1‑100 (MQ=255) aaTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccg < 2:7953746‑M1/140‑45 (MQ=255) aTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgc > 1:2296537‑M1/1‑95 (MQ=255) tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgcc > 2:4837977‑M1/1‑94 (MQ=255) tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGGAAAACCTAGTCAATAAGACCTCCGCCC‑ATGGTgcccgccacacccaagagatacagtacggtcgacagtgaggccgcc > 2:5200777‑M1/1‑94 (MQ=255) ggCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgcca < 2:6932000‑M1/140‑48 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:8020506‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:3905304‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc > 2:6441050‑M1/1‑91 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:508207‑M1/140‑50 (MQ=255) aTTTGGGTCAGCATCATCTCCGCGTGGTTGCTGAAAATCGGGATCCAGTTTTGCGGTAAAACCGAGTCAATCAGACCTCCGCCC‑ATGATGCCCACCACACCAACGAGAGACATTTCGGTCGAGATTGAGTCCGCCAGAAc > 2:8598528/1‑140 (MQ=255) aTTTGGGTCAGCATCATCTCCGCGTGGGTGAGGAACATCGAGATCCAGGTTTGCGGTAAAACCTAGTCAATCAGAACTCCGCCC‑ATGTTGCACACCACACCCAAGAGATACCTTACGGTCGACATTGAGGCCGCAAGCAc > 2:818957/1‑140 (MQ=255) aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcac > 2:8309298‑M1/1‑89 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg < 1:6143626‑M1/140‑53 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagagacattacggtcgacattgaggccgccagcacg < 2:7600700‑M1/140‑53 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTGTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg < 2:5831530‑M1/140‑53 (MQ=255) tGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggc < 1:3841835‑M1/140‑55 (MQ=255) ggTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaacgagatacattacggtcgacattgaggccgccagcacggcgt < 1:2039479‑M1/140‑57 (MQ=255) ggTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgt < 2:6813421‑M1/140‑57 (MQ=255) tCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgt > 1:2606707‑M1/1‑82 (MQ=255) cAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgta < 2:10700278‑M1/140‑60 (MQ=255) tcatATCCGCGTGGTTGCTGAACATCGGGAGCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaacgagatacattacggtcgacattgaggccgccagcacggcgtgtaccgca < 2:2760681‑M1/140‑65 (MQ=255) atatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaa < 2:9759087‑M1/140‑67 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaatgagatacattacggtcgacattgaggccgccagcacggcgtgtaccgccaacagcaa > 1:303910‑M1/1‑68 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa > 1:1268698‑M1/1‑68 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa > 1:4779206‑M1/1‑68 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 2:1352673‑M1/1‑67 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 1:1456492‑M1/1‑67 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 2:5570741‑M1/1‑67 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 2:3669585‑M1/1‑67 (MQ=255) tGGGTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacagtacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacgg > 2:3533481‑M1/1‑65 (MQ=255) ttGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtga > 1:581735‑M1/1‑62 (MQ=255) gCTGAACATCGGGATCCAGTTTTGCGGTAAATCCTAGTCAATCAGACCTCCGCCC‑ATGGTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaa > 1:3256870‑M1/1‑60 (MQ=255) gCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaa < 2:2816875‑M1/140‑81 (MQ=255) cTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaat > 2:1574554‑M1/1‑59 (MQ=255) aCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccacagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaac < 1:6308280‑M1/140‑86 (MQ=255) cATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaaca > 1:6649478‑M1/1‑54 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg > 1:1733006‑M1/1‑52 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagca < 1:9223643‑M1/123‑72 (MQ=255) cGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagga > 2:4406483‑M1/1‑51 (MQ=255) cAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaa > 2:8448063‑M1/1‑44 (MQ=255) ttGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattcca > 1:10647287‑M1/1‑39 (MQ=255) tGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccag > 1:856459‑M1/1‑38 (MQ=255) tGCGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgcgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccag > 1:1360375‑M1/1‑38 (MQ=255) tGCGGTAAAACCTAGACAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagagacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccag < 1:4662195‑M1/140‑103 (MQ=255) cGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcg > 2:6573680‑M1/1‑36 (MQ=255) cGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcg > 1:4302092‑M1/1‑36 (MQ=255) cGGTAAAACCTAGTCAATCAGAACTCCG‑CCAATGTTgcccacaacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggagaaatgaacaggaaggtaaattccagcg > 2:9280730‑M1/1‑36 (MQ=255) ggTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcgg < 2:8904629‑M1/140‑106 (MQ=255) aaaCCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcg > 1:451390‑M1/1‑31 (MQ=255) aaCCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcgg < 1:5410112‑M1/140‑111 (MQ=255) aaCCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcgg < 2:212760‑M1/140‑111 (MQ=255) aaCCTAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcgg < 1:647836‑M1/140‑111 (MQ=255) tAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaat < 1:10025419‑M1/140‑115 (MQ=255) tAGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaat < 1:9186542‑M1/140‑115 (MQ=255) aGTCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattccggtcgacattgaggccgacagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaatt < 2:4723302‑M1/140‑116 (MQ=255) tCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcc > 2:5391428‑M1/1‑23 (MQ=255) tCAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcc > 1:10853039‑M1/1‑23 (MQ=255) cAATCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattccc < 2:3923773‑M1/140‑119 (MQ=255) tCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccacc > 2:7404233‑M1/1‑19 (MQ=255) tCAGACCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccacc > 2:9379433‑M1/1‑19 (MQ=255) aCCTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagca < 2:3165356‑M1/140‑126 (MQ=255) cTCCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 1:8448677‑M1/140‑128 (MQ=255) ccgccc‑atgtTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggc > 1:1012914‑M1/5‑11 (MQ=255) ccgccc‑atgtTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggc > 2:2970241‑M1/5‑11 (MQ=255) cgccc‑atgTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcg > 1:8791253‑M1/4‑10 (MQ=255) cc‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggtt < 1:3518360‑M1/140‑134 (MQ=255) cc‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggtt < 2:9129327‑M1/140‑134 (MQ=255) c‑ATGTTgcccaccacaccaaagagatacattccggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggtta < 2:3760937‑M1/140‑135 (MQ=255) | AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑CC‑ATGTT‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTA > NZ_CP025268/3864306‑3864575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |