BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	360,371	0	C	A	23.9%	300.9 / 42.6	176	V181F (GTT→TTT)	lacA	galactoside O‑acetyltransferase
Reads supporting (aligned to +/- strand): ref base C (79/55); new base A (42/0); total (121/55)
Fisher's exact test for biased strand distribution p-value = 1.46e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 176 total aligned reads displayed.

CGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTCCGATCCAGACGTTATTGC  >  NZ_CP025268/360235‑360508

cGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCg                                                                                                                                        <  1:8853309/140‑1 (MQ=255)

           gATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAAACCGACAAGGAACGc                                                                                                                             >  1:324186/1‑140 (MQ=255)

           gATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTGTATTTAGCGAAAAAACCGACAAGGGACGc                                                                                                                             >  1:323739/1‑140 (MQ=39)

            aTCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGcc                                                                                                                            <  2:8899752/140‑1 (MQ=255)

              cGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAg                                                                                                                          <  2:8394095/140‑1 (MQ=255)

                cTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAgcc                                                                                                                        <  1:9417851/140‑1 (MQ=255)

                cTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAgcc                                                                                                                        >  1:2669267/1‑140 (MQ=255)

                cTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAAACCCACAAGGAACCCCAccc                                                                                                                        >  1:4952544/1‑140 (MQ=255)

                    aCTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCa                                                                                                                    <  1:6551050/140‑1 (MQ=255)

                        gTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCacgac                                                                                                                >  2:4275301/1‑140 (MQ=255)

                                 aTAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTtggtgg                                                                                                       <  1:7034680/140‑1 (MQ=255)

                                    aGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAAt                                                                                                    <  1:1593421/140‑1 (MQ=255)

                                        cAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCt                                                                                                >  2:1136521/1‑140 (MQ=255)

                                           cGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACCAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCtttt                                                                                             >  2:7428316/1‑140 (MQ=255)

                                           cGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGTATGTCtttt                                                                                             >  1:4684082/1‑140 (MQ=255)

                                           cGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCCACAAGGAACGCCAGCCGCCACCACCTTTTGTGGTATGTCtttt                                                                                             >  1:8748702/1‑140 (MQ=255)

                                           cGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAAAAACCCGACAAGGAACGCCAGCCCCCACCACGGTTGGTGGAATGTCtttt                                                                                             >  1:9000929/1‑140 (MQ=255)

                                           cGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAAACCGACAAGGAACGCCAGCCGCCACCACGTTTGGTGGAATGTCtttt                                                                                             >  1:5535304/1‑140 (MQ=255)

                                              aTCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTtgtg                                                                                          >  2:2721293/1‑140 (MQ=255)

                                               tCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGa                                                                                         <  2:7395043/140‑1 (MQ=255)

                                               tCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGa                                                                                         <  2:1136960/140‑1 (MQ=255)

                                               tCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGa                                                                                         <  1:1136521/140‑1 (MQ=255)

                                                cAGGCAATTTTTATAATTTAAACTGACGATTCTAGTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAACCCTAAAAGGAAAGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTtgtgtc                                                                                        >  2:7104239/1‑138 (MQ=255)

                                                cAGGCAATTTTTANAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCAGGTCGTTTATTTAGCGAAAAAAACCAAAAATAAAGCCAGACCCCACCAAGTTTTTTTGAATGTAtttttttaa                                                                                        >  1:9315044/1‑135 (MQ=255)

                                                 aGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACg                                                                                       <  2:1205556/140‑1 (MQ=255)

                                                   gCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAACCCCACAAGGAAAGCCAGCCCCCACGACGTTTGGTGGAATGTGTTTTGTGAAGAt                                                                                     >  1:8795334/1‑140 (MQ=255)

                                                   gCAAATTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAAACCGACAAGGAACGCCAGCCGCCACGACGTGTGGTGGAATGTCGTTTGTGACGAt                                                                                     >  2:2703303/1‑140 (MQ=255)

                                                     aaTTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAACCCCACAAGGAACGCCAGTCGCCACGACGTTTTGTGGAAATGCTTTTGTGACGAtac                                                                                   >  1:6511742/1‑140 (MQ=255)

                                                     aaTTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAACCCCACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGAtac                                                                                   >  1:7175783/1‑140 (MQ=255)

                                                     aaTTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTGTTTTTATCGAAAAACCCGCCCAGGAACCCCCCCCCCCACCCCGGTTTGTGGTATTTGTTTtgtggagagac                                                                                   >  1:4961597/1‑133 (MQ=255)

                                                       tttttATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAAACCGACAAGGAACGCCAGCCGCCACGACGTTTGGGGGAATGTCGTTTGTGAAGAtacta                                                                                 >  1:559904/1‑140 (MQ=255)

                                                                     aCTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAAc                                                                   <  2:6672461/140‑1 (MQ=255)

                                                                      acagcGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACa                                                                  <  1:7463244/136‑1 (MQ=255)

                                                                         aCGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGaa                                                               <  1:2066824/140‑1 (MQ=255)

                                                                         aCGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAAACCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATAAAACCCGCGCCAATAACAGaa                                                               >  1:10573464/1‑140 (MQ=255)

                                                                         aCGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAAAAAACCGACAAGGAACGCCCGCCCCCCCCACGTTTTGTGGAAATTCTTTTTTGACGATACAAACCGCCCCAAAAACaaaa                                                               >  1:2183599/1‑140 (MQ=255)

                                                                         aCGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTGTATTTCGCGAATAACCCGACAAGGAACGCCACCCCCCACGACGTGTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCCATAACAGaa                                                               >  1:8874441/1‑140 (MQ=255)

                                                                                 aCTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAAACCCCCCACGAACGCCCCCCCCCACCCCGGTTTGTGGGATGTATTTTTTGTCGGTACAACCCCCCCCCAAAACAGAAATATaccc                                                       >  1:2501840/1‑140 (MQ=255)

                                                                                   attATAATCTTTGAAATAATAGTGCTTATCCCGGTAGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTCTCCCCGa                                                     <  2:4598747/139‑1 (MQ=255)

                                                                                     tataATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAAACCGACAAGGAACCCCAGCCGCCACGACGTTTGGTGGAATTTCTTTTTTGACGATACTACCCGCGCCCATAACACAAATATaccccagt                                                   >  2:7463243/1‑136 (MQ=255)

                                                                                       taATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGt                                                 >  2:9624970/1‑140 (MQ=255)

                                                                                       taATCTTTGAAAAAATAGTGCATCTCCCGTTCGATTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTAACCGCGCCAATAACAGAATTATCCCCGATGGt                                                 <  2:5887473/140‑1 (MQ=255)

                                                                                        aaTCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTg                                                <  1:3499270/140‑1 (MQ=255)

                                                                                            tttGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGc                                            <  2:5748275/140‑1 (MQ=255)

                                                                                            tttGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAAATATCCCCGATGGTGACGc                                            >  2:2404914/1‑140 (MQ=255)

                                                                                            tttGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAACCCGACAAGGAAAGCCAGCCCCCACGACGTTTGGTGGTATGTCTTTTTTGTCGATAATAACCCCGCCAATAACAGAATTATACACCCTGGTTACGc                                            >  1:8491629/1‑140 (MQ=255)

                                                                                            tttGAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAACCCCACAATGAACGCCAGCCCCCACGACGTTTTGTGGAATGTCTTTTGTGACGAAACAACCCCCGCCAAAAAAAGAAATATCCCCGAAGGTGACGc                                            >  1:7297352/1‑140 (MQ=255)

                                                                                            tttGAAATAATAGTGCTTATCCCGGTCGTGTATTTGGCGAAAAAACCGACAAGGAACCNCACCCGCCACCACGGTTTGTGGTCTGTATTTTTTGTAGATAAAAACCCCCCCCAAAACACAAGTAAACCCCATGGGGACGc                                            >  1:5803359/1‑140 (MQ=255)

                                                                                             ttGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGcc                                           <  2:2183599/140‑1 (MQ=255)

                                                                                             cagAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGcc                                           <  1:7715219/138‑1 (MQ=255)

                                                                                              tGAAATAATTGTGATTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGACACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATCACAGAATTATCCCCGATGGTGACGCCt                                          <  1:7461251/140‑1 (MQ=255)

                                                                                              tGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAAACCGACAAGGAACGCCAGCCGCCACGACGTTTTGTGGAATGTCTTTTGTTACGATACTACCCGCGCCAATAACAGAAATATACCCGATGGTGACGCCt                                          >  2:10076599/1‑140 (MQ=255)

                                                                                              tGAAATAATAGTGCTTATCCCGGTCGTTTAATTAGCGAAAAACCCCACAAAGAACCCCAGCCGCCACCCAGTTTGGGGGAAATTCGTTTGTTAAGCTAAAACCCGCGCCAATAAAAAAAATATACCCCATGGGTACGcca                                          >  1:1430473/1‑139 (MQ=255)

                                                                                               gAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCacga                                                                                                                 >  2:10616360/1‑68 (MQ=255)

                                                                                               gAAATAATAGTGCTTATCCCGGTCGTTTATTTAGCGAATAAACCCACAAGGAACCCCAGCCGCCACGACGTTTGGGGGGAAGTCTTTTTTTACGATAAAAACCGCGCCAAAAACAGAAATATACCCCATGGTGACGCCTg                                         >  1:4423737/1‑140 (MQ=255)

                                                                                                   taataGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGAtt                                     <  1:4068762/140‑1 (MQ=255)

                                                                                                   taataGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGAtt                                     <  2:9315043/140‑1 (MQ=255)

                                                                                                      taGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGACTTATCCCCGATGGTGACGCCTGGATtaat                                  <  2:1821646/140‑1 (MQ=255)

                                                                                                      taGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATtaat                                  <  1:8492990/140‑1 (MQ=255)

                                                                                                      taGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATtaat                                  >  2:3752623/1‑140 (MQ=255)

                                                                                                         tgcggctCCCGGTCGTTTATGTCGCGACTCACCCGACAAGGAACGCCAGCCGCCACGACGTGTGGTGGAATGTCTTTTGGGACGATACTACCCGCGCCAATCACAGAATTATCCCCGATGGGGACGCCTGGATTAATAAc                               <  2:8218625/134‑1 (MQ=255)

                                                                                                           cTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTAccc                                                                              >  1:9908538/1‑91 (MQ=255)

                                                                                                           cTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCGGGATTAATAACca                             >  1:6290240/1‑140 (MQ=255)

                                                                                                           cTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCACCGATGGGGACGCCTGGATTAATAACca                             >  2:6831459/1‑140 (MQ=255)

                                                                                                           cTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAAAAACATAATTATCCCCCATGGTGAAGCCGGGATTAATAActg                             >  2:7715218/1‑138 (MQ=255)

                                                                                                           cTTATCCCGGTCGTTTATTTCGCGAATAAACCCACAATGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCCCGCCAATAACAGAATTATACCCCATGGTGAAGCCTGGATTAATAAAca                             >  1:9820661/1‑140 (MQ=255)

                                                                                                           cTTATCCCGGTCGTTTATTTCGCCAATAAACCGACAAGGAAACCCAGCCCCCAACACGGTTGGTGGAATGTCTTTTGTGTCCATACTACCCGCCCCAAAAAAAGAATTAAACCCCAAGGTGACGCCGGGATTAATAAAca                             >  1:5985428/1‑140 (MQ=255)

                                                                                                           cTTATCCCGGTCGTTTATTTAGCGAATAAACCGAAAAGGAAAGCCAGCCCCCACGACGTTTGGTGGTATGTGTTTTGTGACGATAATACCCGCGCCAATAACAGAAATATCCCCGAAGGGGACGCCGGGATTAATAAAca                             >  2:4833762/1‑140 (MQ=255)

                                                                                                              aTCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAAt                                                                                                    >  2:5114944/1‑66 (MQ=255)

                                                                                                              aTCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACAt                          <  1:6823709/140‑1 (MQ=255)

                                                                                                              aTCCCGGTCGTTTATTTCGCGAATAAACCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACAACCCCCGCCAATAACAGAAATATACCCCATGGTGACGCCGGGATTAATAAAcacaa                          >  1:1615330/1‑139 (MQ=255)

                                                                                                              aTCCCGGTCGTTTATTTCGCGAAAAACCCGACAAGGAACGCCAGCCGCCACGAAGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTAACCCCGCTGGTGACGCCTGGATTAATAACCACAt                          >  2:4574485/1‑140 (MQ=255)

                                                                                                              aTCCCGGTCGTTTATTTAGCGAATAACCCGACAAGGAACGCCATCCGCCACGACGTTTGGTGGTATGTCTTTTTTGACGATACTAACCGCCCCAATAACAGAAATATCCCCGATGGTGACGCCTGGATTAATAACcacct                          >  2:6715637/1‑138 (MQ=255)

                                                                                                              aTCCCGGTCGTGTATTTCGCGAATAACCCGAAAAGGAAAGCCAGCCGCCACGACGGTTTGTGGAAAGTCTTTTGTGACGATACTACCCGCGCCAATAACCGAATTATCCCCGATGGTGTCGCCAGGATTAAAAACCACAt                          >  2:7162866/1‑140 (MQ=255)

                                                                                                               tCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTAACCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCAGGATTAATAACCACATg                         >  2:10615588/1‑140 (MQ=255)

                                                                                                               tCCCGGTCGTTTATTTCGCGAATAAACCCACAAGGAACCCCAGCCGCCACGACGTTTGGTGGAAAGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATg                         >  1:8200499/1‑140 (MQ=255)

                                                                                                               tCCCGGTCGTTTATTTAGCGAATAAACCGACAATGAACGCCAGCCGCCACCAAGTTTTGTGGAATTTCTTTTGTGACGATAATAACCGCGCAAATAACAGAATTATACCCCTTGGTGACGCCTGGATTAATAACCACATg                         >  2:3139022/1‑140 (MQ=255)

                                                                                                                   ggTCGTTTTTTTAGCGAATAAACCCAAAAAGAACACCAGCCGCCACAACCTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCCCCAATAACCGAAATATCCCCCATGGTGAACCCAGGGTTACTAACCACAAGAcgt                     >  2:2926278/1‑138 (MQ=255)

                                                                                                                   ggTCGTTTTTTTAGCGAAAAAACCGCCAACGAACGCCACCCCCCCCCACGGTTGGTGGTATGTATTTTTTGACGCTAAAACCCCCGCCCAAAACAGAATTATACCCCATGGTGACGCCTGGATTAAAAAAcacaataaat                     >  2:1954063/1‑134 (MQ=255)

                                                                                                                   ggTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACtt                     >  2:10285588/1‑140 (MQ=255)

                                                                                                                   ggTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACtt                     >  2:2835434/1‑140 (MQ=255)

                                                                                                                   ggTCGTTTATTTCGCGAAAAAACCGACAAGGAACGCCAGCCCCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAAAAACAGAATTATACCCCAAGGTGACGCCAGGATTAATAACCACAAGACtt                     >  2:4000258/1‑140 (MQ=255)

                                                                                                                   ggTCGTTTATTTCGCGAAAAAACCCACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATACCCGAAGGTGTCGCCAGGATTAATAAACACATGACtt                     >  2:275198/1‑140 (MQ=255)

                                                                                                                   ggTCGTTTATTTAGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGa                                       >  2:3615973/1‑122 (MQ=255)

                                                                                                                   ggTCGTGTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGCCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACtt                     >  2:6298230/1‑140 (MQ=255)

                                                                                                                   ggTCGTGTATTTAGCGAAAAACCCGACAAGGAACGCCACCCGCCACGACGGTTGGTGGAATGTGTTTTGTGACGATACAACCCCCGCCAATAACAGAATTATCCCCGATGGTGACGCCAGGATTAATAACCACAAGAcat                     >  2:3911946/1‑138 (MQ=255)

                                                                                                                    gTCGTTTATTTCGCGACTAACCCGACAAGGAACGCCAGCCGCCACGCCGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGACTTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACtgc                    <  2:1070840/140‑3 (MQ=255)

                                                                                                                    gTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCACCCGCCACGACGTTTGGGGGAATGTCTTTTGTGACGATACAACCCGCGCCAATAACAGAATTATCCCCCATGGTGACGCCTTGATTAATAAACACATTACATc                    >  2:8347657/1‑140 (MQ=255)

                                                                                                                    gTCGTTTATTTAGCGAATAACCCGACAAGGAACCCCAGCCGCCACCACGTTTGGTGGAATTTCTTTTGTGACGATAAAACCCCCGCCCATAAAAGAAATATACCCCATGGTGTCGCCAGGAGTAATAAAcacaatacata                    >  1:6197223/1‑133 (MQ=255)

                                                                                                                    gTCGTTTATTTAGCGAATAAACCGACAAGGAACGCCAGCCCCCACCACCTTTGGTGGAATGTCTTTTTTGACGATACAAAACCCGCCCATAAAACAAATATACCCCATGGTGACGCCAGGAATAATAAACACAAGAcata                    >  2:3289984/1‑137 (MQ=255)

                                                                                                                     tCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTcc                   <  2:2552737/140‑1 (MQ=255)

                                                                                                                     tCGTTTATTTAGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGGTTGGTGGAATGTATTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGGGTCGCCTGGATTAATAACCACAGGACTTcc                   >  2:8645833/1‑140 (MQ=255)

                                                                                                                          tATTTCGCGAATAACCCGACAATGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTCCGATcc              <  2:423499/140‑1 (MQ=255)

                                                                                                                               cgcgAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGt                                                 <  2:679807/100‑1 (MQ=255)

                                                                                                                               cgcgAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTCCGATCCAGACg         <  1:2404914/140‑1 (MQ=255)

                                                                                                                                 cgAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTCCGATCCAGACGtt       >  1:2708666/1‑140 (MQ=255)

                                                                                                                                 cgAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTCCGATCCAGACGtt       >  1:5932769/1‑140 (MQ=255)

                                                                                                                                 cgAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTCCGATCCAGACGtt       >  2:2020705/1‑140 (MQ=255)

                                                                                                                                 cgAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCAGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTCCGATCCAGACGtt       >  2:8689801/1‑140 (MQ=255)

                                                                                                                                      aaCCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTCCGATCCAGACGTTATTGc  <  1:10157479/140‑1 (MQ=255)

CGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTCGCGAATAACCCGACAAGGAACGCCAGCCGCCACGACGTTTGGTGGAATGTCTTTTGTGACGATACTACCCGCGCCAATAACAGAATTATCCCCGATGGTGACGCCTGGATTAATAACCACATGACTTCCGATCCAGACGTTATTGC  >  NZ_CP025268/360235‑360508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`