| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,098,123 | A→T | D206V (GAT→GTT) | hisB → | bifunctional histidinol‑phosphatase/imidazoleglycerol‑phosphate dehydratase HisB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,098,123 | 0 | A | T | 99.1% | 2836.5 / ‑3.9 | 743 | D206V (GAT→GTT) | hisB | bifunctional histidinol‑phosphatase/imidazoleglycerol‑phosphate dehydratase HisB |
| Reads supporting (aligned to +/- strand): ref base A (6/1); new base T (422/308); total (432/311) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 743 total aligned reads displayed.
GCAACTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGG > NZ_CP025268/2097986‑2098261 | cAACTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCa > 2:6558784/1‑140 (MQ=255) cAACTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCa > 2:8420539/1‑140 (MQ=255) cAACTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCa < 2:5300332/140‑1 (MQ=255) cTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGAt < 2:9553951/140‑1 (MQ=255) cTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGAt < 1:5088017/140‑1 (MQ=255) cTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGAt > 1:3487050/1‑140 (MQ=255) gTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCAc > 1:1447265/1‑140 (MQ=255) tGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCAcg > 1:1287591/1‑140 (MQ=255) tGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCAcg > 2:2573003/1‑140 (MQ=255) tGACCGTAACGCTCACGTAGTGCGTAATACCCAAGAGACGCAGATTTAAGTTCAGGTGTGGCTGGATCGTTAAGGTGGCAGCAAGATTAACACCTGCGTTGGCTTCTTTGATCATATGCTGCTTCAGCTCGCTACCCAcg < 2:7078436/140‑1 (MQ=255) gACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCAcgg > 1:6741018/1‑140 (MQ=255) aCCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCAcggc > 1:411223/1‑140 (MQ=255) aCCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCAcggc > 1:3947151/1‑140 (MQ=255) cGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCAcggcgg > 2:5632296/1‑140 (MQ=255) tACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGNTCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGttt > 1:5805208/1‑140 (MQ=255) tACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGttt > 2:1182673/1‑140 (MQ=255) cGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTcc > 1:4959060/1‑140 (MQ=255) tCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCa > 2:3086626/1‑140 (MQ=255) aCGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATg < 2:4857163/140‑1 (MQ=255) gTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAAt > 2:4432993/1‑140 (MQ=255) tGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATc < 2:5112619/140‑1 (MQ=255) cGTAATACCAAAGAGACGCAGATTGCCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTGTCCGCATGGAACTCac > 2:10772700/1‑139 (MQ=255) cGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCaa > 1:6612839/1‑140 (MQ=255) cGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCaa > 2:6927487/1‑140 (MQ=255) tAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGACATCAACg > 2:6812508/1‑140 (MQ=255) tAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACg > 1:3644839/1‑140 (MQ=255) tAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACg > 2:10556986/1‑140 (MQ=255) aTACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTc > 2:1686774/1‑140 (MQ=255) tACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCa > 1:10540368/1‑140 (MQ=255) cAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAg > 2:3642225/1‑140 (MQ=255) cAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAg > 1:9282865/1‑140 (MQ=255) cAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCCACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAg > 2:9814377/1‑140 (MQ=255) cagagACGCAGATTGACGTTCAGGAGTGGCTGGATCGTGAATGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 2:7356311/139‑1 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 1:6550102/140‑1 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 2:9282864/140‑1 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc > 2:5436856/1‑140 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc > 1:179144/1‑140 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 2:2019767/140‑1 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc > 2:2343820/1‑140 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 2:4648875/140‑1 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 2:6170184/140‑1 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 1:8368784/140‑1 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 2:3487050/140‑1 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc > 1:3235080/1‑140 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc > 2:9153819/1‑140 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 2:3824020/140‑1 (MQ=255) aaGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGc < 2:4138224/140‑1 (MQ=255) agagACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCg < 2:6386139/140‑1 (MQ=255) gagaCGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGa < 1:8503147/140‑1 (MQ=255) cgaCGCAGATTGACGGTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCACGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGAc < 2:6650102/139‑1 (MQ=255) agaCGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGAc < 1:2066455/140‑1 (MQ=255) aCGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCTGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCATATCGCTACCCACGGCGGTTTCCGCATGGAACTCAACGTCAAAGGCGAccg > 1:7363575/1‑139 (MQ=255) aCGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACct > 2:7673240/1‑140 (MQ=255) aCGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACct > 1:3071278/1‑140 (MQ=255) aCGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACct > 1:1039153/1‑140 (MQ=255) aCGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACct > 1:9027459/1‑140 (MQ=255) aCGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACct > 2:8609125/1‑140 (MQ=255) gCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACctct > 1:8171863/1‑140 (MQ=255) tGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcg < 1:10730725/140‑1 (MQ=255) tGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcg < 2:2189432/140‑1 (MQ=255) tGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcg > 1:6305830/1‑140 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTATCTCCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGTTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 1:4716843/140‑1 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 1:4487078/140‑1 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 1:7560318/140‑1 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 1:7863315/140‑1 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 1:4288314/140‑1 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 2:274478/140‑1 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 1:5588832/140‑1 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 1:9738190/140‑1 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 2:1287591/140‑1 (MQ=255) aCGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgac < 2:8190217/140‑1 (MQ=255) cGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATcgacg > 1:7229940/1‑140 (MQ=255) gtgtGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATcacca < 1:111958/140‑1 (MQ=255) gtgtGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCAGATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATcacca < 2:7523339/140‑1 (MQ=255) gtgGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACcaca < 1:9532929/140‑1 (MQ=255) gATCGTGAAGGTGACAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTATATATCGACGATCACCACACCGTCGa > 1:5757865/1‑140 (MQ=255) aTCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGaa > 1:2854963/1‑140 (MQ=255) aTCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGaa > 1:5361529/1‑140 (MQ=255) cGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGa < 2:2920873/140‑1 (MQ=255) tGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATa > 2:5578770/1‑140 (MQ=255) tGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATa > 1:9890254/1‑140 (MQ=255) tGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATa > 1:10306818/1‑140 (MQ=255) tGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATa > 1:8582189/1‑140 (MQ=255) tGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATa > 1:8058951/1‑140 (MQ=255) gAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATAc < 1:10125005/140‑1 (MQ=255) gTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGc > 1:5193595/1‑140 (MQ=255) gTGGCAGCAAGATTAACACCGGCGTTGGATTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGc > 2:602556/1‑140 (MQ=255) ggCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCt > 2:4241313/1‑140 (MQ=255) aaCACCGGCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGACATCAACGTCAAAGGCGACCTCTATATCGACGATCACCCCACCGTCGAAGATACCGGCCTGGGGGTGGGCGa > 2:10140684/1‑140 (MQ=255) acacCGGCGTTGGCTTCTTTGATCATATGGTGGTTCAGATCGCTACCCACGGCGGTTTCCGCCTGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACAGTCGAAGATACCGGCCTGGCGCTGGGCGaa > 2:5785561/1‑140 (MQ=255) cacCGGCGTTGGCTTCTTTGATCATATGCGGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAg < 1:8779074/140‑1 (MQ=255) gCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGAc > 2:8096899/1‑80 (MQ=255) gCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTa > 1:7714047/1‑140 (MQ=255) gCGTTGGCTTCTTTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTa > 1:2531192/1‑140 (MQ=255) ggCTTCTTTGATCATATGGTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGTCTATCACCACACAGTCGAAGATAAAGGCCTGGCGCTGGGAGAAGCGCTAAAAAt > 2:1401213/1‑140 (MQ=255) gCTTCTATGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTACGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCAACACACCGTCGAAGATACCGGCCAGGCGCTGGGCGAAGCGCTAAAAATc > 2:10690239/1‑140 (MQ=255) cttTGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCGGGCGCTGGGCGAAGCGCTAAAAATCGccc > 2:3930355/1‑140 (MQ=255) tttGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCt > 1:10002051/1‑140 (MQ=255) tGATCATATGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCg > 2:3193711/1‑140 (MQ=255) atGCTGGTTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTggat > 2:10329358/1‑109 (MQ=255) | GCAACTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGG > NZ_CP025268/2097986‑2098261 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |