| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 356,842 | T→C | *300* (TAA→TAG) | cynR ← | transcriptional regulator CynR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 356,842 | 0 | T | C | 99.7% | 1215.8 / NA | 384 | *300* (TAA→TAG) | cynR | transcriptional regulator CynR |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (246/137); minor base A (1/0); total (247/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 384 total aligned reads displayed.
CGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGTTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAG > NZ_CP025268/356705‑356978 | aGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCTTAGCGCATCAGGCAATTCAAGCCGCAGACCTGTGTCA‑‑GCGGCTACCg > 2:2321032/1‑140 (MQ=255) gTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCa < 2:3408390/140‑1 (MQ=255) tGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACTCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGATACCGTGATTCAttt > 1:5381604/1‑140 (MQ=255) tGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCAttt < 1:8877634/140‑1 (MQ=255) tGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCAttt < 2:10756543/140‑1 (MQ=255) cttAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCcaa > 1:9820356/3‑140 (MQ=18) gTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCcaac > 1:5716755/1‑140 (MQ=25) gTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCcaac > 1:5243111/1‑140 (MQ=25) aGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCcaacaa > 2:949391/1‑140 (MQ=21) aGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCcaacaa > 2:9158377/1‑140 (MQ=21) ttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACcg < 1:7689223/140‑1 (MQ=21) ttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACcg < 2:8971545/140‑1 (MQ=21) ttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACcg < 1:10600172/140‑1 (MQ=21) ttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGGAGGCCGGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACcg < 1:9298052/140‑1 (MQ=255) tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCACCAACCgcgc > 2:6134380/1‑140 (MQ=21) tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCgcgc > 1:10515895/1‑140 (MQ=21) tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCGGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCgcgc > 1:44991/1‑140 (MQ=21) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACACCCGCGCAt < 2:71114/140‑1 (MQ=21) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAt < 1:5032798/140‑1 (MQ=21) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAt < 1:1499997/140‑1 (MQ=21) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAt < 1:174864/140‑1 (MQ=21) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAt < 2:1237489/140‑1 (MQ=21) cGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAtt > 1:3295218/1‑140 (MQ=21) gATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCTCATCAGGCAATTCCAGCCGCGGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTa > 1:5846410/1‑140 (MQ=12) gATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTa > 1:3164954/1‑140 (MQ=21) gATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTa > 1:8981338/1‑140 (MQ=21) aTGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTAt > 1:7938700/1‑140 (MQ=21) ggcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCaa > 1:7040538/1‑140 (MQ=21) ggcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCaa > 1:6000416/1‑140 (MQ=21) ggcgAGAACGCCTTATCCGGCCTACGTAGAGCACTCAACTCGTAGTCCTGATAAGCGTAGATCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GAGGCTACCTTGATTCAATTCCGCCAACAACCGCGCATTAATACaa > 2:3447189/1‑140 (MQ=11) aCGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCAtg < 1:2813231/140‑1 (MQ=21) ttATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTCCCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCaa > 2:4124861/1‑140 (MQ=21) aTCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCaaaa > 1:8267073/1‑140 (MQ=21) ggCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGc < 1:5529180/140‑1 (MQ=21) gCCTACGTAGAGCACTGAACTCGTAGGCCTGCTCAGCGTAGCGCATCAGGCCAGTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGcc > 2:5262283/1‑140 (MQ=11) gCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCACCAACCGCGCATTTATCCAACGCCATGTGCACAAATGcc > 2:10555552/1‑140 (MQ=255) gcTACGTAGAGCACTGAACTCGTAGGCCTGATAAGGGTAGAGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGTGTCATTTCCGCGAACAACCGCGCAGTTATCCAACGCCCTGTGCTAAGATGCCt > 2:9691548/2‑140 (MQ=11) cTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCtt > 1:5093608/1‑140 (MQ=21) cGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTcgc > 2:2049585/1‑140 (MQ=21) cGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTcg < 1:10264673/139‑1 (MQ=21) gagCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCgcggcg > 2:7872174/1‑140 (MQ=37) agctgtGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAGTCCTGCGGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCTACAACCGCGCAGTTATCCAACGCCATGTGCAAAAATGCCTTCGcggcgg > 2:3207782/6‑140 (MQ=11) agCACTGCACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGcggcgg > 1:6132982/1‑140 (MQ=255) agCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGcggcgg < 1:7872175/140‑1 (MQ=37) agCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGcggcgg > 2:3029221/1‑140 (MQ=37) agCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGcggcgg > 2:5504083/1‑140 (MQ=37) tGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTc > 2:3091030/1‑140 (MQ=37) tGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTc > 1:2094014/1‑140 (MQ=37) tGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTc > 2:4897854/1‑140 (MQ=37) tGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTc > 2:5520576/1‑140 (MQ=37) tGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTc > 1:4780894/1‑140 (MQ=37) tGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTc > 1:4344630/1‑140 (MQ=37) tGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATCTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTc > 1:6395259/1‑140 (MQ=255) aaCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCtt > 1:7587943/1‑125 (MQ=25) aaCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCtt < 2:1912479/125‑1 (MQ=25) cTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGcc < 1:3948725/140‑1 (MQ=37) gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAt < 2:37224/91‑1 (MQ=37) gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGAGTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGc > 2:513296/1‑140 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCt < 2:741145/140‑1 (MQ=37) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCt > 2:602919/1‑140 (MQ=37) ggCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTAt > 1:7459451/1‑140 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTAttt > 1:9450918/1‑140 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTAttt > 1:6865246/1‑140 (MQ=255) gATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTc > 1:2559310/1‑140 (MQ=255) gATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTc > 1:7315755/1‑140 (MQ=255) tAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTccg > 1:3419399/1‑140 (MQ=255) aaGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTccgc < 1:6633563/140‑1 (MQ=255) cGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCcgccgc > 1:1010531/1‑140 (MQ=255) cGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCcgccgc > 2:2541832/1‑140 (MQ=255) cGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCcgccgc > 1:2993739/1‑140 (MQ=255) tAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGcaa > 2:10035744/1‑140 (MQ=255) tAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGcaa > 2:6660107/1‑140 (MQ=255) cgcATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGcaacaa > 1:7105383/1‑140 (MQ=255) cgcATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGcaacaa > 1:3696393/1‑140 (MQ=255) cAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAAccg > 1:8792185/1‑140 (MQ=255) gCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAAccgccg < 1:8460757/140‑1 (MQ=255) gCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAAccgccg < 2:7355738/140‑1 (MQ=255) aaTTCCCGCCGCAGACCTGGGTCA‑‑GCGGCTACCGTGATTCAGTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGtt < 2:9309099/140‑1 (MQ=255) aaTTCCAGCCGCTGATCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGtt < 1:10035745/140‑1 (MQ=255) aaTTCCAGCCGCAGAGCTTTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCTCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCGGTCTGCCAGCTATTTTTCCTCCGCAACAAAACCGACGtt < 1:422510/140‑1 (MQ=17) aaTTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGtt < 2:4533129/140‑1 (MQ=255) aaTTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGtt < 2:7285735/140‑1 (MQ=255) aaTTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGtt < 2:5907643/140‑1 (MQ=255) aaTTCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGAGTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGtt < 2:2908931/140‑1 (MQ=255) ttCCAGCCGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCAtgt < 2:6400603/76‑1 (MQ=255) tCCAGCCGCTGATCTGTGTCA‑‑GCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCCTTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTTTTTCCGCCGCAACAAAACCGCCGTtctc < 1:9184458/140‑1 (MQ=14) cAGCCGCAGACCTGTGTCAGCGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTtctc < 2:8340084/140‑1 (MQ=255) ccGCAGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCag > 2:10454643/1‑140 (MQ=255) aGACCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTCTTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCagtagt > 2:9851229/1‑140 (MQ=255) aCCTGTGTCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTgg < 1:1319381/140‑1 (MQ=255) tgtCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCgggg > 2:5648373/1‑140 (MQ=255) gtCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGc < 1:4057358/140‑1 (MQ=255) gtCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGc < 1:1943202/140‑1 (MQ=255) gtCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCAATTATCCAACGCCATGTGCAACAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCCGTAGTGGCGGGGc < 2:3814807/140‑1 (MQ=255) tCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGCa > 2:1520782/1‑140 (MQ=255) tCA‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGCa > 2:8411016/1‑140 (MQ=255) a‑‑GCGGCTACCGTGATTCATTTCCGCCAATAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGCAag < 1:388430/140‑1 (MQ=255) a‑‑GCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGCAag < 2:881096/140‑1 (MQ=255) gCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGCAaga > 2:5390343/1‑140 (MQ=255) gCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGCAaga > 1:8059823/1‑140 (MQ=255) | CGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCA‑‑GCGGTTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAG > NZ_CP025268/356705‑356978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |