BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,864,419	T→C	pseudogene (1103/1613 nt)	CXP41_RS20140 ←	PTS sugar transporter subunit IIB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,864,419	0	T	C	100.0%	1939.8 / NA	556	pseudogene (1103/1613 nt)	CXP41_RS20140	PTS sugar transporter subunit IIB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (266/290); total (266/290)

Only 100 of 556 total aligned reads displayed.

GTGCACATGTTGAACTGCAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑CCATGTT‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG  >  NZ_CP025268/3864282‑3864551

 tGCACATGTTGAACTGCAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAg                                                                                                                                       <  1:3194356/140‑1 (MQ=255)

   cacaTGTTGAACTGCAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTc                                                                                                                                     >  1:10019834/1‑140 (MQ=255)

      aTGTTGAACTGCAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAt                                                                                                                                  >  1:4121590/1‑140 (MQ=255)

        gTTGAACTGCAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCa                                                                                                                                >  2:9841283/1‑140 (MQ=255)

        gTTGAACTGCAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCa                                                                                                                                >  2:1454878/1‑140 (MQ=255)

              cTGCAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTc                                                                                                                          >  2:2492684/1‑140 (MQ=255)

                gCAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCg                                                                                                                        >  2:741205/1‑140 (MQ=255)

                 cAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCG‑c                                                                                                                      >  2:4630523/1‑140 (MQ=255)

                 cAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCG‑c                                                                                                                      <  2:3866904/140‑1 (MQ=255)

                   gAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTCAAGCACAACACAATGGCGATTTGGGTCAGCATCATAGCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTCGTCACTCAGACCTCCG‑ccc                                                                                                                    >  2:7610810/1‑139 (MQ=255)

                   gAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCG‑ccc                                                                                                                    <  2:2575154/140‑2 (MQ=255)

                        aGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGtt                                                                                                                <  1:1345739/140‑1 (MQ=255)

                           gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcc                                                                                                             >  1:6481758‑M1/1‑137 (MQ=255)

                           gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcc                                                                                                             <  1:5020046‑M1/140‑4 (MQ=255)

                           gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcc                                                                                                             <  1:459016‑M1/140‑4 (MQ=255)

                             gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCTATGGCGATTTGGGTCAGCATCTTATCCGCGTGGTTGCTGAACATCGGGATCGAGTTTTGCGGTAAAACCTTGTCAATCAGACCTCCGCCCATGTTgccca                                                                                                           <  2:7035871‑M1/140‑6 (MQ=255)

                             gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgccca                                                                                                           <  2:2342533‑M1/140‑6 (MQ=255)

                              cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccac                                                                                                          <  2:10199674‑M1/140‑7 (MQ=255)

                               ggAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccacc                                                                                                         <  2:6148870‑M1/140‑8 (MQ=255)

                                gAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccacca                                                                                                        >  1:1613258‑M1/1‑132 (MQ=255)

                                gAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccacca                                                                                                        <  1:4481963‑M1/140‑9 (MQ=255)

                                gAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAAGGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccacca                                                                                                        <  2:8337640‑M1/140‑9 (MQ=255)

                                 aaaaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccac                                                                                                       <  2:10472247‑M1/140‑10 (MQ=255)

                                   aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacac                                                                                                     <  2:2867083‑M1/140‑12 (MQ=255)

                                   aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacac                                                                                                     <  1:6340364‑M1/140‑12 (MQ=255)

                                   aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacac                                                                                                     <  2:1914289‑M1/140‑12 (MQ=255)

                                     ccACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacacca                                                                                                   <  1:2403100‑M1/140‑14 (MQ=255)

                                     ccACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacacca                                                                                                   <  2:2768807‑M1/140‑14 (MQ=255)

                                      cACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaa                                                                                                  >  1:628959‑M1/1‑126 (MQ=255)

                                        cGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaag                                                                                                <  2:8847397‑M1/140‑17 (MQ=255)

                                          aaGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagag                                                                                              <  1:1233048‑M1/140‑19 (MQ=255)

                                          aaGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagag                                                                                              <  2:9074224‑M1/140‑19 (MQ=255)

                                           aGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagaga                                                                                             >  2:400579‑M1/1‑121 (MQ=255)

                                           aGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagaga                                                                                             >  1:4763960‑M1/1‑121 (MQ=255)

                                           aGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagaga                                                                                             <  1:9661965‑M1/140‑20 (MQ=255)

                                             tACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagata                                                                                           >  1:7275513‑M1/1‑119 (MQ=255)

                                               cagcagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagataca                                                                                         <  2:7986012‑M1/140‑24 (MQ=255)

                                                agcagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacat                                                                                        <  1:4278903‑M1/140‑25 (MQ=255)

                                                agcagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacat                                                                                        >  2:1144829‑M1/1‑116 (MQ=255)

                                                  cagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTACAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacatta                                                                                      >  2:3673267‑M1/1‑114 (MQ=255)

                                                  cagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacatta                                                                                      <  1:5907908‑M1/140‑27 (MQ=255)

                                                     ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacgg                                                                                   >  2:9472922‑M1/1‑111 (MQ=255)

                                                     ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacac                                                                                                     >  2:5451786‑M1/1‑111 (MQ=255)

                                                      gTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggt                                                                                  <  1:276902‑M1/140‑31 (MQ=255)

                                                       tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtc                                                                                 >  2:3300726‑M1/1‑109 (MQ=255)

                                                       tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtc                                                                                 >  2:9267148‑M1/1‑109 (MQ=255)

                                                       tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtc                                                                                 <  1:8947272‑M1/140‑32 (MQ=255)

                                                       tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtc                                                                                 >  2:9617307‑M1/1‑109 (MQ=255)

                                                       tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagag                                                                                              >  2:5821506‑M1/1‑109 (MQ=255)

                                                          aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagag                                                                                              <  1:3310154‑M1/124‑19 (MQ=255)

                                                            cacaACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacat                                                                            >  1:5542993‑M1/1‑104 (MQ=255)

                                                               aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattga                                                                         >  1:7085287‑M1/1‑101 (MQ=255)

                                                               aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattga                                                                         >  1:2646395‑M1/1‑101 (MQ=255)

                                                               aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattga                                                                         >  1:2277161‑M1/1‑101 (MQ=255)

                                                                aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgag                                                                        <  1:9804046‑M1/140‑41 (MQ=255)

                                                                aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgag                                                                        <  1:8502562‑M1/140‑41 (MQ=255)

                                                                aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTCCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgag                                                                        >  1:8130887‑M1/1‑100 (MQ=255)

                                                                aCCCAAGGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaacgagatacattacggtcgacattgag                                                                        <  2:1062106‑M1/140‑41 (MQ=255)

                                                                         cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc                                                               <  1:1454878‑M1/140‑50 (MQ=255)

                                                                         cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc                                                               <  1:3940909‑M1/140‑50 (MQ=255)

                                                                         cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc                                                               <  2:4383391‑M1/140‑50 (MQ=255)

                                                                         cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc                                                               >  2:6441050‑M1/1‑91 (MQ=255)

                                                                          gATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagca                                                              <  2:3065402‑M1/140‑51 (MQ=255)

                                                                           aTTTGGGTCAGCATCATCTCCGCGTGGGTGAGGAACATCGAGATCCAGGTTTGCGGTAAAACCTAGTCAATCAGAACTCCGCCCATGTTGCACACCACACCCAAGAGATACCTTACGGTCGACATTGAGGCCGCAAGCAc                                                             >  2:818957/1‑140 (MQ=255)

                                                                            tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgaccttgaggccgccagcacg                                                            <  2:4218562‑M1/140‑53 (MQ=255)

                                                                            tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg                                                            <  1:8743369‑M1/140‑53 (MQ=255)

                                                                            tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg                                                            <  1:8310392‑M1/140‑53 (MQ=255)

                                                                              tGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCNTGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggc                                                          <  1:5812068‑M1/140‑55 (MQ=255)

                                                                              tGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggc                                                          <  1:3841835‑M1/140‑55 (MQ=255)

                                                                                ggTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgt                                                        <  2:5186155‑M1/140‑57 (MQ=255)

                                                                                ggTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgt                                                        <  2:6813421‑M1/140‑57 (MQ=255)

                                                                                ggTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgt                                                        <  2:8487578‑M1/140‑57 (MQ=255)

                                                                                  tCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacac                                                                                                     <  2:6976571‑M1/93‑12 (MQ=255)

                                                                                      catcatATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccg                                                  >  1:7735301‑M1/1‑78 (MQ=255)

                                                                                                gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaatgagatacattacggtcgacattgaggccgccagcacggcgtgtaccgccaacagcaa                                        >  1:303910‑M1/1‑68 (MQ=255)

                                                                                                gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa                                        >  2:4834989‑M1/1‑68 (MQ=255)

                                                                                                gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa                                        >  1:687446‑M1/1‑68 (MQ=255)

                                                                                                gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa                                        <  1:8573249‑M1/140‑73 (MQ=255)

                                                                                                 cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac                                       >  1:6070210‑M1/1‑67 (MQ=255)

                                                                                                 cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac                                       >  2:5570741‑M1/1‑67 (MQ=255)

                                                                                                 cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgag                                                                        <  1:10842123‑M1/107‑41 (MQ=255)

                                                                                                  gTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacacaaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacg                                      <  2:8936354‑M1/140‑75 (MQ=255)

                                                                                                   tGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacgg                                     >  2:2061396‑M1/1‑65 (MQ=255)

                                                                                                   tGGGTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacagtacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacgg                                     >  2:3533481‑M1/1‑65 (MQ=255)

                                                                                                       tGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaa                                 <  2:6534433‑M1/140‑80 (MQ=255)

                                                                                                             aCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaac                           <  1:7513260‑M1/140‑86 (MQ=255)

                                                                                                             aCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATAAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaac                           <  2:1243205‑M1/140‑86 (MQ=255)

                                                                                                              cATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaaca                          >  1:6649547‑M1/1‑54 (MQ=255)

                                                                                                                tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg                        <  1:1994085‑M1/140‑89 (MQ=255)

                                                                                                                tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagca                                         <  1:9223561‑M1/123‑72 (MQ=255)

                                                                                                                     aTCCAGTTTTTCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacacaaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggt                   <  2:2638424‑M1/140‑94 (MQ=255)

                                                                                                                             ttGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattcca           >  1:10647287‑M1/1‑39 (MQ=255)

                                                                                                                              tGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaccaggaaggtaaattccag          >  1:5375635‑M1/1‑38 (MQ=255)

                                                                                                                              tGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccag          <  2:8685559‑M1/140‑103 (MQ=255)

                                                                                                                              tGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccag          <  1:354162‑M1/140‑103 (MQ=255)

                                                                                                                                cGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcg        >  1:9169139‑M1/1‑36 (MQ=255)

                                                                                                                                 ggTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtacattccagcgg       >  1:10302820‑M1/1‑35 (MQ=255)

                                                                                                                                 ggTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcgg       <  2:5051097‑M1/140‑106 (MQ=255)

                                                                                                                                 ggTAAAACCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcgg       <  2:1656862‑M1/140‑106 (MQ=255)

                                                                                                                                      aaCCTAGTCAATCAGACCTCCGCCCATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcgg  <  2:3423850‑M1/140‑111 (MQ=255)

GTGCACATGTTGAACTGCAGAATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑CCATGTT‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG  >  NZ_CP025268/3864282‑3864551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`