| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 4,204,740 | T→G | V298G (GTA→GGA) | zraS → | two‑component system sensor histidine kinase ZraS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,204,740 | 0 | T | G | 99.1% | 1836.6 / ‑0.8 | 528 | V298G (GTA→GGA) | zraS | two‑component system sensor histidine kinase ZraS |
| Reads supporting (aligned to +/- strand): ref base T (0/5); new base G (225/298); total (225/303) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.51e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 528 total aligned reads displayed.
TGCCCACGAAATCCGTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGTAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTACCGCC > NZ_CP025268/4204603‑4204876 | cACGAAATCCGTAACCCACTTTCCTCGATTAAAGGTCTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGNATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGa < 1:5804729/140‑1 (MQ=255) cACGAAATCCGTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTTCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGa < 2:4462759/140‑1 (MQ=255) cGTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGa < 1:5572800/140‑1 (MQ=255) gTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGaa < 1:6078123/140‑1 (MQ=255) gTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGaa < 1:2989491/140‑1 (MQ=255) gTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGaa < 1:2870925/140‑1 (MQ=255) gTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGaa < 1:7861169/140‑1 (MQ=255) gTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGaa < 1:1146771/140‑1 (MQ=255) ccACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGt < 2:10789768/140‑1 (MQ=255) cACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGtt < 1:1287747/140‑1 (MQ=255) aCTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTa > 1:479642/1‑140 (MQ=255) aCTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTa > 1:7481437/1‑140 (MQ=255) cTTTCCTCGATTAAAGGTCTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTaa < 1:4309985/140‑1 (MQ=255) cTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTaa > 2:3094745/1‑140 (MQ=255) tttCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCGACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAg > 1:8111473/1‑140 (MQ=255) tttCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAg > 2:530171/1‑140 (MQ=255) cGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGTAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACg > 2:7356771/1‑140 (MQ=255) tAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATc < 2:2193950/140‑1 (MQ=255) aaGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTg > 1:705860/1‑140 (MQ=255) aaGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTg > 2:3585525/1‑140 (MQ=255) aaGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTg > 2:6805210/1‑140 (MQ=255) tGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTg > 2:5926761/1‑140 (MQ=255) tGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTg > 2:2575846/1‑140 (MQ=255) ggCGAAATTCTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGCTGGCGAAAGAGGCCGACCGTTTAAACCGCGGGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGc < 2:6160562/140‑1 (MQ=255) ggCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGc > 1:3680903/1‑140 (MQ=255) ggCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGc > 1:2054574/1‑140 (MQ=255) ggCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGc > 1:4677423/1‑140 (MQ=255) ggCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGc > 1:5674023/1‑140 (MQ=255) ggCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGc > 2:3828533/1‑140 (MQ=255) ggCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCAGGAACTGGTTAAGCCAACGCATCTGGCTTTGc < 2:10574728/140‑1 (MQ=255) gCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACTCATCTGGCTTTGCa > 2:8231715/1‑140 (MQ=255) gCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCa < 1:3956803/140‑1 (MQ=255) gAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAgg < 1:1595421/140‑1 (MQ=255) aaTACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCg < 2:6403337/140‑1 (MQ=255) aTACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCgg > 1:10081746/1‑140 (MQ=255) aTACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCgg < 1:5358141/140‑1 (MQ=255) aTACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCgg > 2:5460443/1‑140 (MQ=255) aTACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCgg < 2:1682165/140‑1 (MQ=255) aCTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTGAAGCCAACGCATCTGGCTTTGCAGGCGGTg < 1:1926624/140‑1 (MQ=255) tttGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGa < 2:6565922/140‑1 (MQ=255) ttGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGACGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGAt > 2:2315757/1‑140 (MQ=255) ttGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGAt > 1:8616058/1‑140 (MQ=255) aGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGCACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAac > 2:5771986/1‑140 (MQ=255) aGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAac > 2:4173574/1‑140 (MQ=255) aGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAac > 1:10256613/1‑140 (MQ=255) aGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAac > 1:10398929/1‑140 (MQ=255) aGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAac > 2:7866786/1‑140 (MQ=255) gcgcgcgcCTGCAGGGGGAGAAGCGCATCATCTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAaca < 2:9166883/140‑1 (MQ=255) gcgcgcgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGTGAAGCGAGTTGCTTGAACTGGTTAAGCCAACGCATATGGCTTTGCAGGCGGTGGATCTGaaaa < 2:4730302/140‑3 (MQ=255) gcgcgcgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAaca < 1:7265659/140‑1 (MQ=255) gcgcgcgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAaca < 1:108592/140‑1 (MQ=255) gcgcgcgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAaca < 1:5884347/140‑1 (MQ=255) gcgcgcgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAaca < 1:997959/140‑1 (MQ=255) gcgcgcgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAaca < 2:9300499/140‑1 (MQ=255) cgcgcgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTAAAACCGCGTGGGAAGCGAGGTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAacac > 2:872187/1‑140 (MQ=255) gcgcgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACg < 1:2488582/140‑1 (MQ=255) ctcgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGc > 2:5130486/3‑140 (MQ=255) cgcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTg < 1:8704221/140‑1 (MQ=255) gcCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGAGAAAGAGGCCGACCGTTTAAACCGCGTGGGTAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGa < 1:1398917/140‑1 (MQ=255) gCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTaa < 1:1688799/140‑1 (MQ=255) gggggAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGTAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCa < 2:6098262/140‑1 (MQ=255) gggggAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCa < 1:5004147/140‑1 (MQ=255) ggggAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTACACCGCGTGGGAAGCGAGGTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCAc < 2:3455669/140‑1 (MQ=255) ggAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGa < 1:7662614/116‑1 (MQ=255) agaAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCAt < 1:6810525/140‑1 (MQ=255) aaGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTa < 1:4376037/140‑1 (MQ=255) aaGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTa < 2:10260927/140‑1 (MQ=255) gcgcATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACa > 1:10537474/1‑140 (MQ=255) gcATCATCTGGCGCAGGTGATGGCGAAAGTGGCCGACCGTTTAAACCGCGGGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGACTATCCACTCATTACAGc > 2:2150369/1‑140 (MQ=255) gcATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGc > 1:4106595/1‑140 (MQ=255) cATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGaa > 2:2941261/1‑69 (MQ=255) cAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGt > 2:3278377/1‑140 (MQ=255) ggCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTc > 2:7027661/1‑140 (MQ=255) ggCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTc < 1:9400456/140‑1 (MQ=255) ggCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTc > 1:2220141/1‑140 (MQ=255) ggggATGGCGAAAGAGGCCGACGGTGTAAACCGCGTGGGAAGCGCGTTGCTGGTCCTGGTGACGCCATCGCATGTGGCTGTGCAGGCGGTGGGTCTCTACACGCTGCGTTAGCACTCGTGACGGCTGGTCAGTCAGGGTg > 2:8490971/4‑140 (MQ=255) ggTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATg > 1:3854337/1‑140 (MQ=255) gTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAAcc < 2:5581515/112‑1 (MQ=255) aTGGCGCAAGAGGCCCACCGTTTAAACCGCGTGGGAAGCGAGTTGATGGAACGGGTAAAGCCAACGCATCTGGCTTTGCAGGCGGTGGCTCTCAAGACGCTGATGAACAACTCAGTCCTGCTGGTTATTCAGGATGCata < 2:318230/140‑3 (MQ=255) aTGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCaaa < 2:1476263/140‑1 (MQ=255) ggCGAAAGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACa > 1:6665419/1‑140 (MQ=255) aaGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCgg < 2:3960939/140‑1 (MQ=255) aaGAGGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCgg > 1:9474343/1‑140 (MQ=255) agagGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCggg < 2:5004086/140‑1 (MQ=255) agagGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCggg < 1:2658741/140‑1 (MQ=255) agagGCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGAAAGTCAGGATGCAAACAGCCggg < 1:4565372/140‑1 (MQ=255) ggCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGgaga < 1:9130688/140‑1 (MQ=255) ggCCGACCGTTTAAACCGCGTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGCAAGTCAGGACGCAAACAGCCGGgaga > 2:7212672/1‑140 (MQ=255) ccGTTTAAACCGCGTGGGAAGCGAGTTGCTCGAACTGGTTAAGCTAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGt < 2:9522043/140‑1 (MQ=255) tacaCCGCGTGGGAAGCGAGTTGCTGGCACTGGTTAAGCCACCGCATCTGGCGTTGCAGGCGGGGGATCTCAACACGCTGATTAACCACTCATTACGGCTGGTAAGTCAGGATGCAAACAGCCGGGAGAGCCAGTTACGc > 2:4827060/4‑140 (MQ=255) cgcgTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTAc > 2:112148/1‑140 (MQ=255) gcgTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTAcc > 1:5388286/1‑140 (MQ=255) gcgTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTAcc > 2:7494715/1‑140 (MQ=255) gcgTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTAcc > 1:3394325/1‑140 (MQ=255) gcgTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTAcc > 1:1815183/1‑140 (MQ=255) cgTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTACCg > 1:8902577/1‑140 (MQ=255) gTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTACCGc < 1:8287555/140‑1 (MQ=255) gTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTACCGc > 1:8798059/1‑140 (MQ=255) gTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTACCGc > 2:182846/1‑140 (MQ=255) gTGGGAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTACCGc > 2:9657874/1‑140 (MQ=255) | TGCCCACGAAATCCGTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGTAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTACCGCC > NZ_CP025268/4204603‑4204876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |