| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,175,450 | +G | pseudogene (483/632 nt) | comR ← | TetR family copper‑responsive transcriptional repressor ComR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,175,448 | 1 | . | G | 97.4% | 888.7 / 14.0 | 275 | pseudogene (485/632 nt) | comR | TetR family copper‑responsive transcriptional repressor ComR |
| Reads supporting (aligned to +/- strand): ref base . (2/5); new base G (108/156); total (110/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 288 total aligned reads displayed.
CAGTTCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑G‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAG > NZ_CP025268/1175310‑1175582 | cAGTTCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑g > 1:3358588/1‑140 (MQ=255) ttCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑g‑gga > 2:3915147/1‑138 (MQ=255) ttCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑g‑gga > 2:3950914/1‑138 (MQ=255) tCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTCCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑g‑ggat < 1:1627758/140‑4 (MQ=255) cGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATACACCTGCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑g‑ggatt > 2:3099040/1‑136 (MQ=255) ggCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGGGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTc > 2:1800768/1‑140 (MQ=255) aTAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcg < 2:262422/140‑1 (MQ=255) agaaCTCACAGTCGTCCCGGCAATCTACATTAGTTTTTCAAGCAATCCCCGTTCGCGTACGCTGACCGACATCCCCTGAATAATACAATTAGGGAATTCTGCCAGATATGTCACATCCCAGTGAGGC‑GCGATCTcccccc < 2:1746964/138‑3 (MQ=255) aaaCGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcgcg > 1:2529064/1‑140 (MQ=255) aaaCGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcgcg > 2:474961/1‑140 (MQ=255) aaCGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcgcgc < 2:286136/140‑1 (MQ=255) cAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCtt > 1:145399/1‑140 (MQ=255) cAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCtt > 1:2472142/1‑140 (MQ=255) cGTTCGGGCAATCGGCATCAGGTGTTCCACTGATGCATCTTCGCTTGGGCTGCTCGACATCCCCTCACTAATACAATTAAGGAATTCTGCCAGTTGTGTCACGTCACAGGGGGGCTG‑GATTTCTCCGCGCGTTTGTCGtt < 2:5054430/140‑1 (MQ=255) cGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGATTAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt < 2:208709/140‑1 (MQ=255) cGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt < 2:71155/140‑1 (MQ=255) cGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt < 1:4358181/140‑1 (MQ=255) cGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt < 1:864831/140‑1 (MQ=255) cGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt < 2:4826585/140‑1 (MQ=255) ttCCGGCAATCTGCATCAGGTGTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAGTAATACAATTAAGGATTTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTGCCCCGCGCGCTTGTCGTTgt > 2:276330/1‑139 (MQ=255) cAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaa < 2:2647774/140‑1 (MQ=255) cAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCa < 1:725309/140‑1 (MQ=255) cAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCa < 2:790865/140‑1 (MQ=255) cAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCa < 2:1224709/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 1:3424122/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 1:3681787/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 1:3739782/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 2:1593140/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 1:1037592/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 2:2960802/140‑1 (MQ=255) tCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTgcg < 1:2694377/140‑1 (MQ=255) tCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTgcg < 2:3820682/140‑1 (MQ=255) ccAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTgcgc > 1:4686473/1‑140 (MQ=255) aGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGctc < 2:1630499/140‑1 (MQ=255) gATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTg > 1:3624465/1‑140 (MQ=255) aTGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGc > 1:1735223/1‑140 (MQ=255) tCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCCCGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATCACAACTGCTGCAAAGTGCGCTCTTGCATCGCATg > 1:4187611/1‑140 (MQ=255) tCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATg > 1:3083025/1‑140 (MQ=255) tCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTGCCATCGCATg > 2:3576419/1‑140 (MQ=255) gcgTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGc < 2:4407765/140‑1 (MQ=255) gcgTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGc < 1:3595852/140‑1 (MQ=255) cgTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCg > 2:331219/1‑140 (MQ=255) gTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGt < 1:3300239/140‑1 (MQ=255) gcTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGAtt > 2:567356/1‑140 (MQ=255) gATCGACATCCCCTGAATAATACACTTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCa < 2:4165248/140‑1 (MQ=255) aTCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCaa > 2:4334789/1‑140 (MQ=255) aTCGACATCACCTGAGTAATACAATTAAGGAATGCTGCCAGATGTGTCACGTCACAGGGTGGCGG‑GATTTCTCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAATTGCGCTATTGCATCGCATGACGTGAGTTCaa > 2:2133315/1‑140 (MQ=255) aCATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTa < 2:145399/140‑1 (MQ=255) ccccTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTgg > 2:5205807/1‑140 (MQ=255) ccccTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTgg > 2:1383861/1‑140 (MQ=255) ccTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGTCg > 1:2073589/1‑140 (MQ=255) tGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGat > 2:2720895/1‑140 (MQ=255) gAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGata < 1:4944592/140‑1 (MQ=255) gAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGata > 1:3003124/1‑140 (MQ=255) aaatgatACAATGAAGGAACTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAACACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGata < 2:3011264/139‑1 (MQ=255) ataCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTcc < 1:4336076/140‑1 (MQ=255) ataCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTcc > 1:2719561/1‑140 (MQ=255) ataCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTcc < 2:2230131/140‑1 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt > 2:34796/1‑69 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTTGCGATATCTCCt > 2:1729490/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 2:3722869/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 2:112585/1‑140 (MQ=255) aCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGTATGGCGTGATTTCAACGTATTGGCGATATCTCCTg < 1:2571630/140‑1 (MQ=255) aCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGTGATATCTCCTg < 2:3697805/140‑1 (MQ=255) aCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTg < 2:976497/140‑1 (MQ=255) cAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGa > 1:2879370/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAAGTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTTCTGAATc > 2:3180983/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 2:4879538/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 1:4515538/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 2:1845610/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 1:542087/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 1:1520380/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 1:1932860/1‑140 (MQ=255) tAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCt < 1:1096180/140‑1 (MQ=255) tAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTAGTGGCGATATCTCCTGAATCt < 2:1543168/140‑1 (MQ=255) aGGAATTCTGCCGGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTgg > 2:880496/1‑140 (MQ=255) gAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTgggg > 1:1801189/1‑140 (MQ=255) gAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTgggg > 2:4923736/1‑140 (MQ=255) gAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTgggg < 2:2535381/140‑1 (MQ=255) aaTTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGga < 2:4603118/140‑1 (MQ=255) aaTTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGga < 1:2918736/140‑1 (MQ=255) ttCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATATCCCCGCGCGCTTGTCGTCGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCACGGCGTGATTTCAACGTATTGGCGATATCTCCAGAATCTGGGgaga > 2:4495053/1‑140 (MQ=255) tGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAggg < 2:1027812/140‑1 (MQ=255) tGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAggg < 1:1998205/140‑1 (MQ=255) tGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAggg < 2:2796097/140‑1 (MQ=255) tGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAggg < 1:325192/140‑1 (MQ=255) tGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGAGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAggg < 1:4114392/140‑1 (MQ=255) gCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAACCTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGggt < 2:1303369/140‑1 (MQ=255) cAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGggtgg < 1:474961/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGGTTTCAACGTATTGGCGATATCTCCTGAATATGAGGAGAGGgtggtg < 2:2471771/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:2834199/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg > 2:3872767/1‑140 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:677378/140‑1 (MQ=255) ttgtgTCACGTAACAGTGGGGCTG‑GATTTCCCCGCGCGCTTGTCCTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGc < 2:4560567/139‑1 (MQ=255) gtcacgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgtt > 1:1240149/1‑140 (MQ=255) tcacgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCGGGGTAGAGGGTGGTGCAgttg > 2:2292166/1‑140 (MQ=255) acgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgtt < 1:4054073/140‑1 (MQ=255) acgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgtt < 1:426914/140‑1 (MQ=255) acgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgtt < 1:880496/140‑1 (MQ=255) tcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGAt < 1:4386719/140‑1 (MQ=255) | CAGTTCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑G‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAG > NZ_CP025268/1175310‑1175582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |