| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,773,671 | (C)5→6 | intergenic (+161/‑55) | yfjQ → / → yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,773,666 | 1 | . | C | 93.7% | 922.4 / 54.1 | 305 | intergenic (+156/‑60) | yfjQ/yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (16/3); new base C (197/87); total (214/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 347 total aligned reads displayed.
GTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773528‑2773800 | gttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑cc < 2:5050059/140‑1 (MQ=255) gtcaaTATCAGACACCCTCTCTCCGAATCGCTCTGTTCTCGTGTTCCTCAACCCCCCGGTTATACCTTTTAACCCCCGTTACACTCGGCTTCTGCAGAAATCAAAAATAGTTTATGCGTTGTCCCTACCCTGTCCG‑c‑c‑cc < 2:4716723/137‑1 (MQ=255) ttAATATCGGACACCATCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTAATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 1:2865443/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc > 1:3925503/1‑140 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 2:1006340/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 2:180799/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 1:1749305/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 1:1929359/140‑1 (MQ=255) ttAATATCGGACAACTCCTGTCCGCTTCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 1:3089158/140‑1 (MQ=255) tatCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑cccctct < 2:3257582/140‑5 (MQ=255) cGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTa < 1:2716574/140‑1 (MQ=255) cGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTa > 1:4822459/1‑140 (MQ=255) ggACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTaa < 2:1391725/140‑1 (MQ=255) gACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTaaa > 2:3566104/1‑140 (MQ=255) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAAt < 1:2479947/140‑1 (MQ=255) accTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTATAGTAATc < 2:310561/140‑1 (MQ=255) accTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATc < 2:310097/140‑1 (MQ=255) ccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTTTCCG‑C‑CTCCC‑TCTTTAAACTAACca > 1:3235126/1‑140 (MQ=37) ccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATc > 1:2797986/1‑139 (MQ=255) gTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTCAAGTCATCAcat > 1:2408357/1‑140 (MQ=255) tCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCAcatc > 1:1391307/1‑140 (MQ=255) cGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCAcatcat > 1:3714829/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACAGCTGGCTTTTGCAGAAATAAAAAATAGGTGCTGCGTTGTCCATACTTTGTCGT‑C‑CTCTC‑TCTTTTAAGTGACGACATCGttt > 1:1845169/1‑140 (MQ=255) aTCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑cc < 2:2771138/114‑1 (MQ=255) cGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTtca < 1:468229/140‑1 (MQ=255) tATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTtcagtc > 1:677629/1‑140 (MQ=255) tATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTtcagtc < 1:4792827/140‑1 (MQ=255) ggcGTGTGCCTCAATCCCCCGGTTATCGCTTTGCAACCCCGTTACGTCTGGCTTTTGCATAAAGATAAAATAGTTTCGGCGTTGTCCATACCCTGCCCG‑C‑C‑CCCGTCTTTAACCGAATCACCTCAATTTCAGTCAGTTaa < 2:4757196/138‑1 (MQ=255) cGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACt < 2:4148391/140‑1 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACtt > 1:1715337/1‑140 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAGATACACAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTACAGTAATCACATCATTTTCAGTCAGTTAACttt > 1:4304131/1‑140 (MQ=21) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACttt > 1:3396538/1‑140 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACttt > 2:1837641/1‑140 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACttt > 1:2670447/1‑140 (MQ=255) ccTCAATCCCCCGGTTGTAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAACAATTAGTTTCTGCGTTGTCCATGCCCTGTCTGCC‑C‑CCC‑ACTTTAAACCAATGACATCGTTTTCGGTCGATCAGCTTTCCTg > 1:2725188/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTg > 2:3386308/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTg > 2:2137233/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTg > 2:1612266/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 1:5076243/96‑1 (MQ=255) tCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCGGTTAACTTTCCTgca > 2:2397266/1‑138 (MQ=255) tCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGga > 1:1152863/1‑140 (MQ=255) tCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGga > 1:18584/1‑140 (MQ=255) cAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGgag > 2:2098938/1‑140 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 1:4599398/140‑1 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 1:1429306/140‑1 (MQ=255) ttATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATg > 1:2620558/1‑140 (MQ=255) tataGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGa < 1:3665406/140‑1 (MQ=255) taGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGaca < 2:694517/140‑1 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCa < 1:3449858/140‑1 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:2181837/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 2:1918747/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAACCTCTCATGACACAGGCAg > 2:3700520/1‑140 (MQ=255) ccGTTACATCTGGCTTTTGCAGAAATAACAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTCTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTCGAGAATCTCTCATGACACAGGCAGAAcgcc > 2:4043509/1‑140 (MQ=17) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTtcagt < 2:334617/94‑1 (MQ=255) tCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGAc > 2:3773842/1‑140 (MQ=255) tCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCGGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCCTGAc > 2:1168935/1‑140 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTACCTTTCCTGGAGAATCTCTCATGACACAGGCCGAGCTCCGCCATGACCgg > 2:2902077/1‑140 (MQ=17) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCgg > 1:5199025/1‑140 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCgg > 2:3180026/1‑140 (MQ=255) gCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAACCTCTCATGACACAGGCAGAACGCCGCCATGACCggc > 1:5134767/1‑140 (MQ=255) cTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAAGCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggct > 1:1215549/1‑140 (MQ=255) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCGGCCATGACCggctggct > 2:4389578/1‑140 (MQ=255) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACACTGTCCGCC‑C‑CCC‑TCTTCAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGGGAATCTCTCATGACACAGGCAGAACGCCGCCGTGACCggctggct > 2:4506053/1‑140 (MQ=17) aaaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcag > 2:800821/1‑140 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 2:2285832/140‑1 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 1:3492113/140‑1 (MQ=255) aaaaaTAGTTTCTTCGTTGTCCATACCCTGTCCG‑CAC‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 2:4925762/140‑1 (MQ=255) aaaaaTAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 2:2003531/140‑1 (MQ=255) aaTAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCGGTCAGGCTGTCAc < 1:105731/140‑1 (MQ=255) aaTAGTGTCTGCGTTGTCCATACCCTGTCCGTC‑C‑CCC‑TCTTTATAGTAATCATATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 2:3839878/140‑1 (MQ=14) tCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAAt < 2:3855041/140‑1 (MQ=255) gCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAg < 2:111836/140‑1 (MQ=255) gCGTTGTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAg < 2:554035/140‑1 (MQ=255) gTCCATACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTc > 1:3777968/1‑140 (MQ=255) aTACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGt < 1:3785078/140‑1 (MQ=255) tACCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGtt < 1:4905508/140‑1 (MQ=255) aCCCTGTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTg > 2:877987/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGGGAATCCCTCATGACACAGGCAGAACGCCGCCATGACCGCCTGGCTGTCCGGCTGTCACTCATAATCAGCCGTCGCGTCGCGGGt > 1:1326121/1‑140 (MQ=14) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAGTCTCTCATGACACAGGCAGAACGCCGCCGTGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:2120220/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACTCCGCCATGACCGGCTGGCTGCCAGCCTGTCACTGATAATCAGCCTTCTGGTTGCgtgt > 2:497088/1‑140 (MQ=14) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCgggg > 2:2201246/1‑139 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCgggg > 1:2943081/1‑139 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1326663/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:4543581/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:4354574/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:4044293/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:590858/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5073808/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:631371/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:772310/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1030586/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:463789/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1638680/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3604226/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:4234501/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3915401/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2673815/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:2350313/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3794243/1‑140 (MQ=255) gTCCGCC‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:2043158/1‑140 (MQ=255) | GTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑C‑CCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773528‑2773800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |