| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,014,858 | +G | intergenic (+159/+61) | arcC → / ← yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,014,857 | 1 | . | G | 98.1% | 1037.3 / 10.3 | 315 | intergenic (+158/+62) | arcC/yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base . (4/2); new base G (150/159); total (154/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 324 total aligned reads displayed.
AATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑G‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014718‑3014991 | tACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑gg > 1:1502398/1‑139 (MQ=255) ccATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑ggca > 1:1681395/1‑137 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGGTTTGTTGATGCCGGATGGGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGGATCAGG‑CAAtt > 1:4020187/1‑140 (MQ=25) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 1:841169/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 2:1493727/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 2:2356715/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 2:4254179/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 1:2790208/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 2:3913958/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 2:3397435/1‑140 (MQ=255) ccGGCCAAAGCTTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGGGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATCGCCTGCACTGCACTCGTAGGCCTGATAAGCGCAGCGCGTCAGG‑CAAttt > 2:713335/1‑140 (MQ=25) ccGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAttt > 2:2161650/1‑140 (MQ=255) cGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATTAGG‑CAATTTg > 2:2378923/1‑140 (MQ=255) ggCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTgg < 1:4122074/140‑1 (MQ=255) ccAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCg > 2:1862967/1‑140 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAACACATCGCAACTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 1:2089614/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 1:3923166/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 1:4246546/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 1:3378743/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 1:454030/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 2:3214594/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 2:5156442/140‑1 (MQ=255) tCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcatca < 1:3330893/140‑1 (MQ=255) tCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcatca > 2:5117856/1‑140 (MQ=255) gtaagtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGtct < 1:2400384/140‑1 (MQ=255) agtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAg > 1:4404873/1‑140 (MQ=255) gcgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCTATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGcc > 1:1366887/1‑140 (MQ=255) gcgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGcc < 2:2531407/140‑1 (MQ=255) gcgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGcc > 1:445907/1‑140 (MQ=255) gcTTTGTTGTTGCCGGATGCGGCGCGGGCGCCTTATCCGTCCTACAAAACTTCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGGGGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTccggccgg < 2:3518721/140‑1 (MQ=21) gcTTTGTTGATGCCGGATGCGGCGCGAGCGTCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGGAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGTCGTTTGTAATCAGTCTCAGGCCgg < 2:545231/140‑1 (MQ=21) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:5094289/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:734738/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:1367370/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:1181075/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:2412221/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:3350172/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:3830824/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:1893050/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:2548978/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:4720938/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:2483137/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:3526169/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:3662133/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:3849110/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:2214489/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATGTGGCGTGTGGCATCAGGCTCAGGCCgg < 2:453826/140‑1 (MQ=21) tttGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgggt < 1:2967291/140‑1 (MQ=255) tttGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgggt < 1:537426/140‑1 (MQ=255) tttGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgggt < 2:3796191/140‑1 (MQ=255) ttgttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAACTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtg > 2:3136299/1‑140 (MQ=255) aTGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAAt > 1:158391/1‑140 (MQ=255) ggATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAt < 2:3577238/140‑1 (MQ=255) gATGCGGCGCGAGCGCCTTATGTGTCCTACAAAACATCGCAAATTTAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATc < 2:3369382/140‑1 (MQ=25) cgccAGCGCCTTATCCGTCCTACAAAACATCGCAAAGGGAAAAGATTGCAATGCACTTAGAGGGCTGAGACGCGTAGCGCACCAGG‑CAATTTGGTGTCGGTCATCACCCTCAGGCCGGGTGCGTCACACCATCCCGCGAt > 2:3470099/1‑140 (MQ=255) cgAGCGCCTTAGCCGACCTACAAAACATCGCAAACTCAATAGGCGGCAATGGACTTGTAGGCCTGACAAGCGTAGCGCATCA‑GTCAATTTGGCATTTGTCATCAGTCTCAGGCCTCGTGGGTAATACCAACCGGCCAttt < 2:2919699/140‑1 (MQ=25) ttATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTaa > 2:1283732/1‑140 (MQ=255) tATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAg < 1:1749729/140‑1 (MQ=255) tCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGcc < 2:3157234/140‑1 (MQ=255) tCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACtt > 1:2699309/1‑140 (MQ=255) ccTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTc > 1:533727/1‑140 (MQ=255) cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTGATCAGTCTCAGTCCGGGTGGTTAATACTATACGGCCACTTTTATTTAAGCCACCTcc > 2:2315095/1‑140 (MQ=25) cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTcc > 1:2994183/1‑140 (MQ=255) aaCATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCAct > 1:3182260/1‑140 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtc > 2:4570055/1‑140 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtc > 2:2951301/1‑140 (MQ=255) tCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtctt < 1:1906244/140‑1 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt > 1:466425/1‑140 (MQ=255) aTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCg < 1:720249/140‑1 (MQ=255) aTTCAATAGATCGCAATGCACTTGTAGGCCTGATAAGCGTACCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCg > 2:2193943/1‑140 (MQ=255) aaTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCttt < 1:1224211/140‑1 (MQ=255) tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa < 2:3043715/140‑1 (MQ=255) tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa < 2:4151019/140‑1 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGccc > 2:866097/1‑140 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGccc > 1:5052742/1‑140 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGccc > 1:4633781/1‑140 (MQ=255) ggCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGGCATCAGTGTCAGGCCGGGTGGGTAATACCATCCGGCTATTTTCATTTCAGCCACTTCCAGCACGTATTTGGTCGCCGGCACGccc > 2:2941611/2‑140 (MQ=25) gCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCTGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCt < 1:4328420/140‑1 (MQ=255) gCAATGCACTTGTAGGCCCGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATAGCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCt < 2:3708440/140‑1 (MQ=255) cAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTg > 2:4623865/1‑140 (MQ=255) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 2:1722851/140‑1 (MQ=255) aTGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGAt < 1:488878/140‑1 (MQ=255) cACTTGTAGGCCTGATAATCGTAGCTCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCCGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCTACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCa < 2:4697421/140‑1 (MQ=38) cACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCa > 1:4966863/1‑140 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCATCAGG‑CCACTTGGCGTTTGTCCTCACTCTCAGGCCGGGTGGGTAATCCCACCCGGCCATTTTCATTTCCGCCACTTCCAGCACTTCTTCTGTCGCTTCCACGCCCTGATGCATCa < 2:5002712/140‑1 (MQ=37) tGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGGTGCATCaa < 2:570848/140‑1 (MQ=255) ccTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcatcat > 2:1516552/1‑140 (MQ=255) ccTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcatcat > 2:2431016/1‑140 (MQ=255) cTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt < 1:3062525/140‑1 (MQ=255) cTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGAAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt < 1:2864122/140‑1 (MQ=255) gATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 1:1842093/1‑140 (MQ=255) gATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 1:599776/1‑140 (MQ=255) gATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 2:3013907/1‑140 (MQ=255) gATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 2:5068282/1‑140 (MQ=255) gATAAGCGTAGCGCATCAGG‑CAATTTGGCGGTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACAGCATTaa > 2:2997564/1‑140 (MQ=255) aaGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGc < 2:4354753/140‑1 (MQ=255) aGCGTAGCGCCTCAGG‑CCATTTTGCGTTTGTCGTCAGTCTCAGGCCGGGTGGGTAATCCCATCCGGCCATTTTCATTTAAGCCACTTCCAGCGCTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGcc < 2:4077058/140‑1 (MQ=255) aGCGTAGCGCATGAGG‑CGATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAGGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACCTCATTAACGcc < 2:3460262/140‑1 (MQ=255) cGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCCCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCTTCAACATCATTAACGCCTc > 2:279817/1‑140 (MQ=255) cgcATCAGG‑CAGTTTGGCGGTTGGCAGCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTGCATTTAAGCCACTTCCAGCACTTCGTTTGTCGCTTTCACGTTCTGATGCATCAACAGCAGTAACGCCTcgggta > 2:1114344/1‑135 (MQ=255) | AATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑G‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014718‑3014991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |