| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,239,247 | (T)6→7 | intergenic (+264/‑18) | ygjR → / → alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,239,241 | 1 | . | T | 95.4% | 1083.6 / 36.9 | 302 | intergenic (+258/‑24) | ygjR/alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Reads supporting (aligned to +/- strand): ref base . (9/5); new base T (108/180); total (117/185) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.27e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 374 total aligned reads displayed.
TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑TTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 | gtgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t < 1:241829/140‑1 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGGGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTCGGCC‑G‑tt > 2:796287/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGTTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 2:1583547/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAACAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 2:2967587/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 2:5167714/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 2:366609/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 2:2914261/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 2:1315306/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 1:998467/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 1:4409232/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 1:4034731/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 1:3920912/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑tt > 1:2687044/1‑140 (MQ=255) tgtgAAAAAACACATCCGGGCACCGGGCAACCAGAAAGGAATACGCAGACGTATTCCTCTCTCGCCGTAAGTGAGACCTTGCCGGAAGCCGACGGCTATGCATAGAAAGCAGCGGCTGACGTCTTCCGACGCCGGCC‑G‑tc > 2:2531368/1‑139 (MQ=255) aaaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑ttt‑tt‑t < 1:1118015/140‑1 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑ttt‑tt‑tt < 2:4827717/140‑2 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑ttt‑tt‑tt < 1:525746/140‑2 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑ttt‑tt‑tt < 2:2946729/140‑2 (MQ=255) cacaTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TAtgtg < 2:3341007/140‑1 (MQ=255) aacccGGGCAGCCGGCGACCTGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGCAAGTGAGACCTTGCCGGAAGCCGAGTGCTATGCGGAAATAGCAGCGGCTGACGTCTTCCGACGTGGGCC‑GTTTT‑TT‑TATGTGTa < 2:4774801/137‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAACAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGaa < 1:3107820/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGaa < 1:3767524/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGaa < 1:5072423/140‑1 (MQ=255) ggTCAACGGGCAACACGCAAGGCATCCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAACGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGac < 2:3973617/140‑2 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACt < 1:3179492/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACt < 2:3301123/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACt < 2:2722170/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACt < 2:194903/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACt < 2:1824622/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACt < 1:836483/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGCCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACt > 1:61382/1‑140 (MQ=255) ccGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCt < 1:1017605/140‑1 (MQ=255) gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGa < 2:3154586/140‑1 (MQ=255) gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGa < 1:3500218/140‑1 (MQ=255) cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGaa < 1:3300437/140‑1 (MQ=255) cAACCAGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATACAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGaa < 1:3997063/140‑1 (MQ=255) aaCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAAt > 1:5644/1‑140 (MQ=255) aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATa > 2:3795291/1‑140 (MQ=255) aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATa > 1:1424728/1‑140 (MQ=255) gAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGt > 1:2218253/1‑140 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 2:3498815/140‑1 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 2:2447090/140‑1 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc > 2:432959/1‑140 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc > 1:3731391/1‑140 (MQ=255) cGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg < 2:1505460/140‑1 (MQ=255) aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt > 1:2093642/1‑140 (MQ=255) cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTa > 2:734516/1‑140 (MQ=255) ccTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGc > 2:4447420/1‑140 (MQ=255) ttttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCgg < 1:2336916/140‑1 (MQ=255) ttttttGTGGTAAGTGAGACCTTGCCGGAAGGCGACGTCTATGCATAACAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCgg < 1:1755315/140‑1 (MQ=255) tgtttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGAGGTTGGCC‑G‑TTT‑TTGTATGTGTATGGAACTTCTATGAATACTGTCGGCACGCGCTTGCTATGGGGCgta > 2:430462/3‑138 (MQ=255) tttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 2:301062/140‑1 (MQ=255) tttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 2:5033062/140‑1 (MQ=255) ttgttgTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc > 1:2470462/1‑140 (MQ=255) aGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑TTTGTT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGGACGCCGTTGCTATGTGGCGGATTCGCtgttgt > 2:4566476/1‑140 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGTCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 1:3033130/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 1:4729032/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:3097407/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:593339/140‑1 (MQ=255) aCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGc > 2:3727780/1‑140 (MQ=255) cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCa > 2:2092097/1‑140 (MQ=255) cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCa < 1:727449/140‑1 (MQ=255) cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCa < 2:1649464/140‑1 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 2:3558794/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 2:1683013/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 2:326249/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 1:5020336/1‑140 (MQ=255) gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGTTGTTGTTGTCGCCATTa > 1:1808213/1‑140 (MQ=255) aGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTgg < 1:4881976/140‑1 (MQ=255) aGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTgg < 1:4192151/140‑1 (MQ=255) cGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTa < 1:2853445/140‑1 (MQ=255) gTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa < 2:1146164/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGG‑TTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 1:4290679/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTGGCTATGGGGCGGATTCGCTGGTGTTGTCGCCATTATGCTGGCTATCGAc < 2:3534964/140‑1 (MQ=255) ccTATGCATATAATGCTGCTGCTGACGTCTTCCGACGTTGTCA‑GTTTT‑TT‑TATGTCTACGGAACTTATCGGCATCCTCTACGATCGCTGTGGCTATGGGGCTGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 2:1447646/139‑1 (MQ=255) cTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAcc < 1:4921451/140‑1 (MQ=255) cTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAcc < 1:128005/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt < 2:2022048/140‑1 (MQ=255) tGCATAAAAAGCAGCGACTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt < 1:2881451/140‑1 (MQ=255) aaaaaGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGttgttg > 2:765428/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 2:648059/1‑140 (MQ=255) gcGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 1:1670567/140‑1 (MQ=255) cGGCTGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcgt > 2:1786288/1‑140 (MQ=255) tGACGTCTTCCGCCGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 1:2011261/140‑1 (MQ=255) tGACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 2:2783895/140‑1 (MQ=255) gACGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTgg < 2:2626870/140‑1 (MQ=255) cGTCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTgggg < 1:4546413/140‑1 (MQ=255) tCTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:1358524/140‑1 (MQ=255) gcTTCCGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGGCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:1927494/139‑1 (MQ=255) ccGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 2:2633815/1‑140 (MQ=255) ccGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 2:2184876/1‑140 (MQ=255) ccGACGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 1:2600083/1‑140 (MQ=255) cGTTGTCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:4876239/140‑1 (MQ=255) cGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 1:3580045/140‑1 (MQ=255) cGTTGGCC‑GTTTT‑TT‑TATGTGTAAGGAACGTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:4972398/140‑1 (MQ=255) ggCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCCTTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc < 1:4637474/140‑1 (MQ=255) ggCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAGCTGTTGTTGCAGGGGCGTCTTGGGGCACATGccatgacc > 2:415999/1‑140 (MQ=255) ggCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc > 2:4934057/1‑140 (MQ=255) ggCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc < 1:911323/140‑1 (MQ=255) ggCC‑GTTTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc < 1:4625386/140‑1 (MQ=255) | TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑TTT‑TT‑TATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |