| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,509,139 | +C | pseudogene (137/878 nt) | php ← | phosphotriesterase‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,509,136 | 1 | . | C | 96.2% | 1272.5 / 39.2 | 400 | pseudogene (140/878 nt) | php | phosphotriesterase‑related protein |
| Reads supporting (aligned to +/- strand): ref base . (10/5); new base C (183/199); total (193/207) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 434 total aligned reads displayed.
CACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CG‑C‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508998‑3509270 | cacaTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTacgca‑cgt > 1:4596948/1‑139 (MQ=255) tGTTCCGGGAAATACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CG‑c‑cccg < 2:3669386/140‑3 (MQ=255) tGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CG‑c‑cccg < 2:4934730/140‑3 (MQ=255) tCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CG‑C‑CCcgggt > 1:843902/1‑138 (MQ=255) gggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGtcat < 2:5094146/140‑1 (MQ=255) gggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCACATTACATCAAACATAAATTGCGGATTGCGCCCCAAGTAACGGTTGGTCATCTCAATCACATTACGCA‑CG‑CTCCGGGtcat > 2:1544945/1‑140 (MQ=255) gggAAAAACGCGTCCTCGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGtcat > 2:4008904/1‑140 (MQ=255) aaaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑AGCC‑CCGGGTCATCAgg < 1:1085192/140‑1 (MQ=255) aaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGt < 1:3802753/140‑1 (MQ=255) aaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGt < 1:355514/140‑1 (MQ=255) aataaCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCCTAAATTGCGCATTGCGCCCCATGTAACGGCTGGTCCTCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTgg > 2:4235794/1‑140 (MQ=255) aataaCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTgg < 2:3306826/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:567275/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa > 1:3161841/1‑140 (MQ=255) cGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATg < 2:1193320/140‑1 (MQ=255) gTACAGGCCACCACGTTTATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTTGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGGCATCAGGTCGTTCATCTCCGGGCAAATaaa > 2:485837/1‑140 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa > 2:1047145/1‑140 (MQ=255) tACAGGCCACCGCGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:965069/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCGTGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 2:759564/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:2286002/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGGAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 2:4784436/140‑1 (MQ=255) aGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCa < 2:1036571/140‑1 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGt > 1:1260877/1‑112 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc > 1:3279010/1‑135 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa < 1:2003012/140‑1 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa > 1:2204305/1‑140 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa > 2:3061505/1‑140 (MQ=255) gCCACAACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa > 1:4559506/1‑140 (MQ=255) caccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACt > 2:3258836/1‑140 (MQ=255) caccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACt > 2:4607530/1‑140 (MQ=255) accacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTg > 2:3842526/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 1:2080710/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 2:537427/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 2:1102574/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 1:2349035/1‑140 (MQ=255) cGTTGATCCCCGTCTCGCGCATTACATCATGCACAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCa < 2:3638015/140‑1 (MQ=255) aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCACTGCGCCCCATGCAACGGTGCGTCAGCTCAATCACATGACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAAGGAACGCATATTGATAAAggcg > 2:2382264/1‑140 (MQ=255) aTCCCCGTCTCGCGCATTACAGCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCACAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGCCGTTCATGTCCTGGCAAATGAACTCATACTGATCAAggcg > 2:4315775/1‑140 (MQ=255) ccccGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc < 1:794910/140‑1 (MQ=255) ccccGTCTCGCGCAGTACACCAAGCATAACTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACCC‑C‑CCCGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc < 2:2074988/140‑1 (MQ=255) cGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGt > 2:4058403/1‑140 (MQ=255) cGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGt < 1:3394433/140‑1 (MQ=255) gTCTCGCGCATTACATCAAGCATAAATTTCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCAACAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTc > 2:4697761/1‑140 (MQ=255) gcgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgt < 1:3514445/140‑1 (MQ=255) cgcATTACATCAAGCATAACTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgtt < 1:370942/140‑1 (MQ=255) cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgtt > 1:1692581/1‑140 (MQ=255) cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgtt > 1:4966720/1‑140 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg > 1:4106808/1‑140 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg > 1:4912827/1‑140 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga < 1:198529/140‑1 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga < 2:1283029/140‑1 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga < 2:3883591/140‑1 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga > 2:443473/1‑140 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga < 1:4359841/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTGACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga > 1:1159751/1‑140 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCGATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 2:5160298/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:672821/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:4681744/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:430529/140‑1 (MQ=255) ttgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt < 1:298137/140‑1 (MQ=255) gtgcacattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt < 1:1738573/139‑1 (MQ=255) gcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCa < 1:4001530/140‑1 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATcga > 2:4349904/1‑138 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 1:5121762/1‑140 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 2:1418834/1‑140 (MQ=255) gcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAat > 2:2835279/1‑140 (MQ=255) cattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAata < 1:2769619/140‑1 (MQ=255) cattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAata < 1:2560083/140‑1 (MQ=255) tgcgcCCCATGTACCGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGc < 2:4877434/140‑1 (MQ=255) tgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTCCGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCAACGTTGTTTTTAAAGCCGGAGAGATCAATATGc > 2:3432328/1‑140 (MQ=255) gcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGa < 1:4252226/140‑1 (MQ=255) ccccATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGAt < 1:1835814/140‑1 (MQ=255) ccccATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGAt < 2:4559506/140‑1 (MQ=255) aTGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTc < 2:17459/140‑1 (MQ=255) tGTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCa < 1:2900711/140‑1 (MQ=255) gTAACGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAt < 1:3726261/140‑1 (MQ=255) aaCGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATgg > 1:3740485/1‑140 (MQ=255) cGGTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGc > 2:2223149/1‑140 (MQ=255) ggTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 2:2743140/140‑1 (MQ=255) ggTTGGTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 1:4845275/140‑1 (MQ=255) gTTGGTCATCTCAATCATATTACGCA‑CGAC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCACATGAACGAATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGa < 2:1346955/140‑1 (MQ=255) ggTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:1004702/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:2515043/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:2231238/1‑140 (MQ=255) ctcAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAAc > 2:3728184/1‑140 (MQ=255) ctcAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAAc > 1:3639741/1‑140 (MQ=255) ctcAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAAc > 2:1497884/1‑140 (MQ=255) cAATCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGa < 2:3549895/129‑1 (MQ=255) aTCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCGAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGCTTTTAACGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGt < 2:1855623/140‑1 (MQ=255) aTCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGt < 2:1831588/140‑1 (MQ=255) aTCACATTACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGt < 1:3065633/140‑1 (MQ=255) ttACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATc < 1:4192539/140‑1 (MQ=255) ttACGCA‑CGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGGGTAACCCGTCGGATc > 1:1557465/1‑140 (MQ=255) acgca‑cgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCCCGTTGTTTTTAAAGCAGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:2930332/140‑1 (MQ=255) acgca‑cgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:1389470/140‑1 (MQ=255) acgca‑cgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:2588609/140‑1 (MQ=255) cgca‑cgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaa > 1:1289892/1‑140 (MQ=255) cgca‑cgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaa > 1:3454170/1‑140 (MQ=255) agca‑cgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGCTCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaa > 2:2123538/2‑140 (MQ=255) gca‑cgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaaa < 1:514430/140‑1 (MQ=255) | CACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑CG‑C‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508998‑3509270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |