| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | 3382524 = | 210 (0.700) | 15 (0.050) | 9/256 | 10.2 | 7.2% | coding (1097/1368 nt) | degQ | serine endoprotease DegQ |
| ? | NZ_CP025268 | 3382554 = | 193 (0.690) | coding (1127/1368 nt) | degQ | serine endoprotease DegQ | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGATCACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP025268/3382670‑3382524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgctggAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATCGGGT > NZ_CP025268/3382554‑3382692 TGATCACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCA > 1:2777074/1‑140TGATCACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCA < 2:1463105/140‑1 TCACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCG < 2:2344187/140‑1 TCACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCG < 2:159535/140‑1 ACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCT < 1:5049408/140‑1 ACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCT > 1:2747226/1‑140 ACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCT > 1:2747111/1‑140 ACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCAGCGATTGTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCT < 2:200357/140‑1 ATCGTCTTTTTGCCAGCCAGCCTGAGCAGCTGGGCGTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGG > 1:1970786/1‑140 ATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGG < 1:4604939/140‑1 ATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGG > 1:1970840/1‑140 TCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGA < 1:5120187/140‑1 TCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGA < 1:5169363/140‑1 TCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGA < 1:1601935/140‑1 TTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTCATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTG < 2:1519756/140‑1 GCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACG < 2:3637912/140‑1 AAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACATCTTCATCTATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTAACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTT < 1:1091111/140‑1 AAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTT < 1:1090792/140‑1 AGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATACCCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTT < 1:2671734/140‑1 GAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTTGAGCGATGGT < 2:122200/140‑1 GAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTTGAGCGATGGT < 1:5199955/140‑1 GAGCAGCTGGGCTTACTTTGACAACTTCCTCGATGTTAAAA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTTGAGCGATGGT < 2:122660/140‑1 GCTTCCTTTGACAACTTCATCGATTTTAATC‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAG < 2:2770914/140‑1 CTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCCTCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGC < 1:2603805/140‑1 TCGATTTTAATA‑CCTCTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAA < 2:2582667/140‑1 TTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCG < 1:85226/140‑1 GCGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGA > 2:4908812/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT > 2:4222866/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT > 1:2581080/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT > 1:1941156/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT > 1:765665/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT > 2:163429/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT > 2:163481/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT > 2:1673162/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT < 1:1855892/140‑1 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT > 1:1652585/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT < 2:2486795/140‑1 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT > 2:2709854/1‑140 CGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCCGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGAT < 2:4946394/140‑1 GCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATC < 1:3875576/140‑1 TGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATCGG < 2:1163301/140‑1 TGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATCGG < 2:4458275/140‑1 GAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATCGGGT > 1:1926678/1‑140 GAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATCGGGT > 1:1093539/1‑140 GAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATCGGGT > 1:3831583/1‑140 TGATCACATCGTCTTTTTGCAAGCCAGCCTGAGCAGCTGGGCTTCCTTTGACAACTTCATCGATTTTAATA‑CCTTTGCCGCCATCTTTTAGCTGACCATCGCTCAACGTTGCACCTTCCAGCGCTGGCGTGATCATTTCAGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP025268/3382670‑3382524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgctggAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATCGGGT > NZ_CP025268/3382554‑3382692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |