| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3545337 | 330 (1.100) | 11 (0.040) | 9/256 | 10.2 | 3.4% | coding (194/771 nt) | bioH | pimeloyl‑ACP methyl ester esterase BioH |
| ? | NZ_CP025268 | = 3545378 | 320 (1.140) | coding (153/771 nt) | bioH | pimeloyl‑ACP methyl ester esterase BioH | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGCACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3545192‑3545337‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcttcggGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAG < NZ_CP025268/3545378‑3545240 AGCACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGG > 2:4954806/1‑140 GCACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGC < 2:3368859/140‑1 ccCTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTCATCAGGTGCCTGTTGCAGCACGGCT < 2:4673251/138‑1 CACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCT < 1:902513/140‑1 CACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCT < 2:1854547/140‑1 CACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCT < 1:1542491/140‑1 CACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCT < 1:3602316/140‑1 CACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCT > 1:4187777/1‑140 CACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTCGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCT < 2:394084/140‑1 CTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCTTC > 2:3896087/1‑140 CTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGGTAACGCATTCTGGCTTGCCACCAGCCCGCCCAGAGTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCGTC > 2:2819255/1‑140 CTAAAACAAGGTGACGACGCCACGGGGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTCATCAGGTGCCTGTTGCAGCACGGCTTC > 2:4695306/1‑140 TAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCTTCG > 1:1042635/1‑140 TAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCTTCG > 2:2734248/1‑140 CTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGC < 2:3836165/140‑1 ACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGACTTCGGGCGTAGCCGGGGAATTGGTTCGCTGTCACTTCCTGATGTGGCCGAAGCCTTGCTGCAACATGCACCTGATAAAGCCATTTGGattgg > 2:4976522/1‑135 GCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAG > 1:1168184/1‑140 AACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTG > 2:1744389/1‑140 AACCAAATGGCTTTATCAGGTGCCTGGTGCAGCACGGCTTCGGGCGTAGCCGGGGATTTTGTGCGCTGTCACTTGCTGATATCGCCGAAGCCGTGCTGCAACAGGCCCCTGATAAAGCCATTTGGTTAAGCTGGAGTCTG > 2:1743293/1‑140 GTGCCTGTTGCAGCACGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCC > 1:1090877/1‑140 GTGCCTGTTGCAGCACGGCTTCGGGCGTAGCCGGGGATTTCGTGCGCTGTCCCTTGCTGATATGGCCGAAGCCGTGCTGCAACCGGCACCTGATAAAGACATTTGGGTAGGCTGGAGGCTGGGGGGGCTGGTGGCAAGCC > 2:4497124/1‑140 TGCCTGTTGCAGCACGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCAGTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCA > 2:449540/1‑140 TGTTGCAGCACGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATT > 2:894629/1‑140 TGCAGCACGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCG < 1:894629/140‑1 CACGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAAC > 1:1437980/1‑140 CGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCC > 1:5102988/1‑140 CTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATGTGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCGATC > 2:4330572/1‑140 CTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACGTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATC > 2:4798533/1‑140 CTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATC > 2:2601505/1‑140 CTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATC > 1:4429928/1‑140 TTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCC < 1:956797/140‑1 TTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCC < 1:3024928/140‑1 TTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCC < 1:3063936/140‑1 GGGCGTCGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGA < 1:398139/140‑1 GGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGA < 1:3414115/140‑1 GGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGA < 1:1218071/140‑1 GGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAG > 1:5074948/1‑140 GGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAG > 2:2226442/1‑140 GGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAG > 2:1940942/1‑140 GGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAG > 1:1312644/1‑140 GGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAG > 2:1456851/1‑140 GGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGGTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAG > 1:3702418/1‑140 GGCGTAGCCGGGGATTGGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACATGCACCTGATAAAGCGATTTGGTTAGTCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGGTAACCCAGCCCGAG > 2:4381813/1‑140 AGCACTAAAACAAGGTGACGACGCCACGGTGACCAGCGCCTGAACACGCTCGGGATGGGTTAACGCAATCTGGCTTGCCACCAGCCCGCCCAGACTCCAGCCTAACCAAATGGCTTTATCAGGTGCCTGTTGCAGCACGGCTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3545192‑3545337‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcttcggGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAG < NZ_CP025268/3545378‑3545240 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |