| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 49,913 | G→T | W30C (TGG→TGT) | folA → | type 3 dihydrofolate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 49,913 | 0 | G | T | 96.9% | 940.2 / 7.3 | 263 | W30C (TGG→TGT) | folA | type 3 dihydrofolate reductase |
| Reads supporting (aligned to +/- strand): ref base G (4/4); new base T (110/143); total (116/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 264 total aligned reads displayed.
TACGCTTTACGTATAGTGGCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGCCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGGTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATCGCGTAACGTGGGTGA > NZ_CP025268/49777‑50049 | tACGTATAGTGGCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCa > 1:3682367/1‑140 (MQ=255) tACGTATAGTGGCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCa < 1:2915127/140‑1 (MQ=255) aCGTATAGTGGCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCaa > 1:2854007/1‑140 (MQ=255) aCGTATAGTGGCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCaa > 1:2002737/1‑140 (MQ=255) ataGTGGCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACAcc < 1:5038578/140‑1 (MQ=255) ataGTGGCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACAcc < 2:3227959/140‑1 (MQ=255) ggCGACAATTTTTTTTATCGGGAAATCTCAATGGTCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTt‑aaa > 1:2560090/1‑140 (MQ=255) ggCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTt‑aaa > 1:466347/1‑140 (MQ=255) gCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGGTTTAAACGCAACCCCTt‑aaat > 1:3613522/1‑140 (MQ=255) cGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTt‑aaata < 1:3907895/140‑1 (MQ=255) cGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTt‑aaata > 2:21553/1‑140 (MQ=255) cGACAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGACGTTAGCGGTAGATCGCGTTATCGGCATGGCAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTt‑aaata > 2:4589975/1‑140 (MQ=255) cGACAATTTTTTTTATCGGGAAAGCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTc‑aaata > 1:1403872/1‑140 (MQ=255) aCAATTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTt‑aaataaa > 1:4812550/1‑140 (MQ=255) aCAATTTTTTTTATCGGGAAATCGCAAGGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCGCGCCTGTTGTAAGCGCAACACGTt‑aaataaa > 2:1741551/1‑140 (MQ=255) aaTTTTTTTTATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAAcc < 2:2188332/140‑1 (MQ=255) tttttttATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGt > 1:542921/1‑140 (MQ=255) ttttATCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGAt > 1:1009622/1‑140 (MQ=255) aTCGGGCAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATg < 2:4397410/140‑1 (MQ=255) tCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATgg < 1:1863227/140‑1 (MQ=255) tCGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATgg < 2:3105326/140‑1 (MQ=255) cGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATggg < 1:3145620/140‑1 (MQ=255) cGGGAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATggg < 1:358844/140‑1 (MQ=255) gAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGgccg < 2:4874653/140‑1 (MQ=255) gAAATCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGgccg < 1:4302335/140‑1 (MQ=255) aaaTCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGgccgc < 1:2658707/140‑1 (MQ=255) aTCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCa < 2:3396112/140‑1 (MQ=255) aTCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCa < 1:3476991/140‑1 (MQ=255) aTCTCAATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCa < 2:3941239/140‑1 (MQ=255) cAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGaat > 1:5076584/1‑140 (MQ=255) agtcTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGaatc > 2:831190/4‑140 (MQ=255) agtcTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGaatc > 2:271059/4‑140 (MQ=255) agtcTGATTGCGGCGTTAGCGGTAGAACGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGaatc > 1:4410761/4‑140 (MQ=255) cTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGaatcaat < 1:4103090/140‑1 (MQ=255) cTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGaatcaat < 1:287784/140‑1 (MQ=255) cTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGaatcaat < 1:2945639/140‑1 (MQ=255) gATTGCGGCGTTACCGGTAGATCGCGTTATCGGCATGGAAAACGCGATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAATGGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCg < 2:4501827/140‑1 (MQ=255) ttGCGGCGTTAGCGGTAGTTCGCGTTATCGGCATGGATAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGgt < 2:1373839/140‑1 (MQ=255) tGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCg > 2:1086181/1‑137 (MQ=255) ggcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGGTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGgtcgtc < 1:4045922/140‑1 (MQ=255) gcgTTAGCGGTAGATCGCGTTATGGGCATGGAAAACGCCATGCCGTGGAACCTGCGTGCCGATCTCGCCGGGTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCTCCATACCTGGGAATCATTCGGTCGTcc > 2:32069/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCTGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTcc > 1:3943322/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACTCAACACCTT‑AAATAAACCCGTGATTATAGGCCGCCATACCTGGGAATCAATCTGTCGTcc > 2:157625/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTcc > 1:2568914/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTcc > 2:890371/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTcc > 2:4445852/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTcc > 1:824619/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTcc > 2:4841146/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTcc > 2:4979364/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTcc > 1:3124779/1‑140 (MQ=255) gcgTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTcc > 1:1476919/1‑140 (MQ=255) gcgTTAGCGGTAGATAGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGGCGTcc > 2:284722/1‑140 (MQ=255) tAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGa < 1:1727297/140‑1 (MQ=255) tAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGa < 2:2889643/140‑1 (MQ=255) tAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGa < 1:3409067/140‑1 (MQ=255) tAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGa < 1:211414/140‑1 (MQ=255) cgcgTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCaa < 1:4549025/140‑1 (MQ=255) cccgTTACCGGAATGCAAATCGTCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGTAATCAATCGGTCGTCCGTTGCCAGGACGCaa < 2:3088814/138‑1 (MQ=255) gcgGTATCGGCCTGGAAAACGCCATGCCGTGGAACCTGATTGCCGATCTCGCCTGTTTTAAACGCAACACCTTAAAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCaa < 2:4737738/140‑1 (MQ=255) cgTTATCGGCATGGAAAACGGCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCaaaa > 2:3565324/1‑140 (MQ=255) cgTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCaaaa > 1:609537/1‑140 (MQ=255) cgTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCaaaa > 2:407413/1‑140 (MQ=255) cgTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCaaaa > 1:1298232/1‑140 (MQ=255) cgTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCaaaa > 2:1400784/1‑140 (MQ=255) tATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAata < 2:1769733/140‑1 (MQ=255) tATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAata < 1:1681916/140‑1 (MQ=255) tATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAata < 1:2400085/140‑1 (MQ=255) cATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATcc > 1:2215270/1‑140 (MQ=255) aTGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCt < 1:1879963/140‑1 (MQ=255) ggAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTca < 2:75215/140‑1 (MQ=255) ggAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTca < 1:4763454/140‑1 (MQ=255) acaaCGCCATGCCGTGGAACCTGCCTGCCGATATCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTCATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTcagc < 2:664266/138‑1 (MQ=255) tcGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGt < 1:4580039/139‑1 (MQ=255) aCGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGt < 1:1147458/140‑1 (MQ=255) aCGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGt < 2:1181967/140‑1 (MQ=255) ccATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCaa < 1:4981048/140‑1 (MQ=255) ccATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCaa < 2:2006035/140‑1 (MQ=255) ccATGCAGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑CAATAACCCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCaa < 2:4273254/140‑1 (MQ=255) cATGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAAc < 2:262212/140‑1 (MQ=255) aTGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAAcc > 2:2652266/1‑140 (MQ=255) ttccGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCg > 2:4924493/3‑140 (MQ=255) tGCCGTGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCg > 1:4932834/1‑140 (MQ=255) gCCGTCGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCgg > 1:5105262/1‑140 (MQ=255) tGGAACCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTAc > 1:4487576/1‑140 (MQ=255) aaCCTGCCTGCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGa < 1:176456/140‑1 (MQ=255) aaCCTGCCTGCCGAGCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCCAAAATATTATCCTCAGCAGTCAACCGGGTACGGa < 1:152526/140‑1 (MQ=255) cctgcctgCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAACCCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACg < 1:377752/140‑1 (MQ=255) cctgcctgCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGtacgtacg > 2:4137487/1‑140 (MQ=255) cctgcctgCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACg < 2:5041403/140‑1 (MQ=255) cctgcctgCCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGAGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCACAAATATTATCCTCAGCAGTCAACCGGGTACGGACg > 2:3534543/1‑140 (MQ=255) ctgcctgcCGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGa < 2:1507640/140‑1 (MQ=255) gcctgccGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATc > 2:4005430/1‑140 (MQ=255) cctgccGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATcg > 1:134476/1‑140 (MQ=255) ctgccGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATcgc > 2:2106479/1‑140 (MQ=255) tgccGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATcgcg < 1:4590420/140‑1 (MQ=255) tgccGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCGGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATcgcg < 1:923167/140‑1 (MQ=255) ccGATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATCATCCTCAGCAGTCAACCGGGTACGGACGATCGCGTa > 2:3630534/1‑140 (MQ=255) gATCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATCGCGTAAc < 2:2354110/140‑1 (MQ=255) aTCTCGCCTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCCATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATCGCGTAACg < 2:3851597/140‑1 (MQ=255) cTGTTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATCGCGTAACGTGGGTGa > 2:3849854/1‑140 (MQ=255) | TACGCTTTACGTATAGTGGCGACAATTTTTTTTATCGGGAAATCTCAATGATCAGCCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGGTTTAAACGCAACACCTT‑AAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATCGCGTAACGTGGGTGA > NZ_CP025268/49777‑50049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |