BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,371,754	T→C	326 (TAA→TAG)	pspF ←	phage shock protein operon transcriptional activator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,371,754	0	T	C	100.0%	957.0 / NA	286	326 (TAA→TAG)	pspF	phage shock protein operon transcriptional activator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (177/109); total (177/109)

Only 100 of 286 total aligned reads displayed.

TGCGCTGAGCGATTAATAGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGTTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACT  >  NZ_CP025268/1371619‑1371890

tGCGCTGAGCGATTAATAGCCCAACGCAATACTGACGGATGCGCTGCGATTATCAGGGCAGCAAACGACGTATTGATGATGTATACG‑GAATAAAGCATGCACGCAGCATTCGGCAAGATGTATTGCACAACTTCGCTaaa                                                                                                                                      >  2:2339619/1‑140 (MQ=255)

      gAGCGATTAATAGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGt                                                                                                                                <  1:1762771/140‑1 (MQ=255)

      gAGCGATTAATAGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGt                                                                                                                                <  1:5176458/140‑1 (MQ=255)

        gCGATTAATAGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGc                                                                                                                              >  2:1602812/1‑140 (MQ=255)

                 aGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTcaac                                                                                                                     >  1:2624435/1‑140 (MQ=255)

                  gCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTcaaca                                                                                                                    <  1:974053/140‑1 (MQ=255)

                  gCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTcaaca                                                                                                                    <  2:362685/140‑1 (MQ=255)

                   cccAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTcaacaa                                                                                                                   >  2:979280/1‑140 (MQ=255)

                   cccAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTcaacaa                                                                                                                   >  2:485544/1‑140 (MQ=255)

                      aaCGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgc                                                                                                                >  1:3559353/1‑140 (MQ=255)

                       ccGCAATAATGTCTGATGCGCTGCGCTTATCAGGCATGCAAACGACGTATTGATTATGTATGCC‑GAATAAATCATTCACGCCGAATCCGGAACGTTGTATTGCTCAACTTCGCGAAATCTGGTGCTTTGTCGACACcgcg                                                                                                               <  2:3376753/139‑1 (MQ=255)

                       aCGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgcg                                                                                                               <  1:4715456/140‑1 (MQ=255)

                       aCGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgcg                                                                                                               <  1:3003121/140‑1 (MQ=255)

                       aCGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgcg                                                                                                               <  2:3323467/140‑1 (MQ=255)

                       aCGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATCTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgcg                                                                                                               <  2:3906809/140‑1 (MQ=255)

                        cGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCTCTTAATCTGGTGCTTTTTCAACAAcgcgc                                                                                                              >  1:3272194/1‑140 (MQ=255)

                        cGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgcgc                                                                                                              >  1:483194/1‑140 (MQ=255)

                        cGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgcgc                                                                                                              >  1:438958/1‑140 (MQ=255)

                         gCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgcgcg                                                                                                             <  1:4216668/140‑1 (MQ=255)

                             taatGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAAc                                                                                                         >  1:2789283/1‑140 (MQ=255)

                             taatGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAAc                                                                                                         >  1:4091344/1‑140 (MQ=255)

                             taatGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACCTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAAc                                                                                                         >  1:2720906/1‑140 (MQ=255)

                                  tCTGCTGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATCAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCACAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACtgatg                                                                                                    <  2:1519076/140‑1 (MQ=255)

                                  tCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACtgatg                                                                                                    <  2:3220897/140‑1 (MQ=255)

                                  tCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGAGGAACtgatg                                                                                                    >  2:2963791/1‑140 (MQ=255)

                                  tCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGAC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGTAACtgatg                                                                                                    <  1:3948353/140‑1 (MQ=255)

                                  ccTGATTCGCTGCTCTTATCAGGCCTGCAAACGCCGTATTAATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTTTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACtgatg                                                                                                    <  2:769351/139‑1 (MQ=255)

                                   cTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACtgatga                                                                                                   <  1:1285165/140‑1 (MQ=255)

                                    taaTGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTACGCC‑GAATAACGCATTCACGCAGCATCCGGCAAGCTGTATTGCTCAACTTCGCTACATCTGGTGCTTCTTCAACAACGCGCGGAACTgatgat                                                                                                  <  2:3724491/138‑1 (MQ=255)

                                    tGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTgatgat                                                                                                  >  1:1519955/1‑140 (MQ=255)

                                    tGATGCGCTGCGCTTATCAGGCCAGCTAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCAGCCGGCAAGTTGTATTGCTCACCTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTgatgat                                                                                                  >  1:3100455/1‑140 (MQ=255)

                                     gATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATa                                                                                                 >  1:3932309/1‑140 (MQ=255)

                                     gATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATa                                                                                                 >  2:948216/1‑140 (MQ=255)

                                     gATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATa                                                                                                 >  2:2159181/1‑140 (MQ=255)

                                         cgctgcgctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGtt                                                                                             <  2:3769883/140‑1 (MQ=255)

                                           ctgcgctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTcaaca                                                                                                                    <  1:4537403/115‑1 (MQ=255)

                                           ctgcgctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTaa                                                                                           >  1:1884677/1‑140 (MQ=255)

                                           ctgcgctTATCAGGCCTGCAAACGACGTATTGATTATGTATCCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTGTTTCAACAACGCGCGGAACTGATAATAAGTTaa                                                                                           >  2:2493033/1‑140 (MQ=255)

                                            tgcgctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCCACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAAc                                                                                          <  1:3427489/140‑1 (MQ=255)

                                            tgcgctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAAc                                                                                          >  2:1035353/1‑140 (MQ=255)

                                            cgcgctTATCACGCCTGCAAACGGCGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTCACTCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAAc                                                                                          <  1:64909/139‑1 (MQ=255)

                                               gctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATACAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAAcccc                                                                                       <  2:2886050/140‑1 (MQ=255)

                                               gctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAAcccc                                                                                       <  2:3262035/140‑1 (MQ=255)

                                               gctTATCAGGCCTGCAAACGACGTATGGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAAcccc                                                                                       <  1:2348292/140‑1 (MQ=255)

                                                 ttATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAg                                                                                     <  2:2246702/140‑1 (MQ=255)

                                                   agcAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATACAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCGACTTCGCTAAATCTGGTGCTTTTTCACCAACGCGCGGACGTGATGATAAGTTAACCCCAGTa                                                                                   <  2:2547238/138‑1 (MQ=255)

                                                        gCCTGCAAACGACGTATTGATTATGTATGCCGGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCAGGGGCTGTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTc                                                                               >  2:3518152/1‑140 (MQ=255)

                                                        gCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCa                                                                              >  2:1266676/1‑140 (MQ=255)

                                                        gCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCa                                                                              >  1:3861539/1‑140 (MQ=255)

                                                        gCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCa                                                                              >  2:3855967/1‑140 (MQ=255)

                                                          cTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATACGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGc                                                                            >  2:552299/1‑140 (MQ=255)

                                                           tGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGcc                                                                           >  1:4019251/1‑140 (MQ=255)

                                                           tGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTGAACCCCAGTAATTCAGcc                                                                           >  2:3696771/1‑140 (MQ=255)

                                                             cAAACGACGTATTGATTATGTATGCT‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCcgc                                                                         >  2:4671925/1‑140 (MQ=255)

                                                             cAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCcgc                                                                         >  1:5061069/1‑140 (MQ=255)

                                                             cAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCcgc                                                                         >  1:2123298/1‑140 (MQ=255)

                                                             cAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCcgc                                                                         >  1:1371150/1‑140 (MQ=255)

                                                             cAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCcgc                                                                         >  2:3140158/1‑140 (MQ=255)

                                                              aaaCGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCcgcg                                                                        <  1:591225/140‑1 (MQ=255)

                                                              aaaCGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCcgcg                                                                        <  2:2533050/140‑1 (MQ=255)

                                                                  gacgTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCt                                                                    <  1:5210161/140‑1 (MQ=255)

                                                                  gacgTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCt                                                                    <  2:1157338/140‑1 (MQ=255)

                                                                  gacgTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCt                                                                    <  1:4525317/140‑1 (MQ=255)

                                                                  gacgTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCt                                                                    >  1:2921535/1‑140 (MQ=255)

                                                                   acgTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCATTAATTCAGCCGCGCGCtt                                                                   <  1:1196874/140‑1 (MQ=255)

                                                                   acgTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCtt                                                                   <  1:2583016/140‑1 (MQ=255)

                                                                       aTTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTgg                                                               <  2:1871826/140‑1 (MQ=255)

                                                                       aTTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTgg                                                               >  1:1147750/1‑140 (MQ=255)

                                                                            ttATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTtata                                                          >  1:1050649/1‑140 (MQ=255)

                                                                            ttATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTtata                                                          >  1:3659375/1‑140 (MQ=255)

                                                                              atgtatgCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATAtt                                                        >  2:2570693/1‑140 (MQ=255)

                                                                               tgtatgCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTAAGCCGCGCGCGTCTGGTTATAttt                                                       >  2:643783/1‑140 (MQ=255)

                                                                                gtatgCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTc                                                      >  1:208133/1‑140 (MQ=255)

                                                                                  atgCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTccc                                                    <  1:2289626/140‑1 (MQ=255)

                                                                                  atgCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTccc                                                    <  2:4724059/140‑1 (MQ=255)

                                                                                   tgCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCt                                                   >  2:5106600/1‑140 (MQ=255)

                                                                                     cc‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCttg                                                 >  1:4812255/1‑140 (MQ=255)

                                                                                     cc‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCttg                                                 >  1:2538773/1‑140 (MQ=255)

                                                                                     cc‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCttg                                                 >  2:3042520/1‑140 (MQ=255)

                                                                                         aaTAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATCAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCttgttg                                              >  1:2509875/1‑140 (MQ=255)

                                                                                          aTAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGc                                             >  1:4605488/1‑140 (MQ=255)

                                                                                          aTAAAGCATTCACGCCGCATCCGGCAAGGTGTATTGCTCAACTGCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGc                                             >  2:340033/1‑140 (MQ=255)

                                                                                             aaGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCaaa                                          <  2:3421984/140‑1 (MQ=255)

                                                                                             aaGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCaaa                                          <  1:3391899/140‑1 (MQ=255)

                                                                                              aGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAAc                                         >  1:4929771/1‑140 (MQ=255)

                                                                                                   tCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGt                                    >  2:4168862/1‑140 (MQ=255)

                                                                                                   tCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGt                                    >  2:2720683/1‑140 (MQ=255)

                                                                                                   tCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGt                                    >  2:4011038/1‑140 (MQ=255)

                                                                                                   tCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGt                                    <  1:4155003/140‑1 (MQ=255)

                                                                                                   tCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGt                                    >  1:2025197/1‑140 (MQ=255)

                                                                                                   tCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGt                                    >  1:879713/1‑140 (MQ=255)

                                                                                                          gcATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTgcagca                             >  1:4140998/1‑140 (MQ=255)

                                                                                                           cATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCaa                            >  2:5131554/1‑140 (MQ=255)

                                                                                                           cATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCaa                            >  1:1024860/1‑140 (MQ=255)

                                                                                                             tCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAAct                          >  2:4113224/1‑140 (MQ=255)

                                                                                                                                 aaCTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTCACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATCTTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGa      >  1:4266710/1‑140 (MQ=255)

                                                                                                                                 aaCTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGa      >  2:3965212/1‑140 (MQ=255)

                                                                                                                                   cTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGaaa    >  2:4031143/1‑140 (MQ=255)

                                                                                                                                   cTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGaaa    <  2:1769625/140‑1 (MQ=255)

                                                                                                                                   cTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCCGCTGCATCTGaaa    >  2:4463303/1‑140 (MQ=255)

TGCGCTGAGCGATTAATAGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCC‑GAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGTTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACT  >  NZ_CP025268/1371619‑1371890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`