BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,391,913	A→G	T126A (ACA→GCA)	tyrR →	transcriptional regulator TyrR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,391,913	0	A	G	100.0%	660.3 / NA	200	T126A (ACA→GCA)	tyrR	transcriptional regulator TyrR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/80); total (120/80)

Only 100 of 208 total aligned reads displayed.

GGCGTTGAGCGCGTTACTGGAGGCGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCACACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTCAGGATGAAAATGA  >  NZ_CP025268/1391777‑1392049

  cGTTGAGCGCGTTACTGGAGGCGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACaa                                                                                                                                     <  2:3514117/140‑1 (MQ=255)

        gcgcGTTACTGGAGGCGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGAtt                                                                                                                               >  1:581651/1‑140 (MQ=255)

          gcgTTACTGGAGGCGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTaa                                                                                                                             <  1:3000653/140‑1 (MQ=255)

          gcgTTACTGGAGGCGTTGACTGAACCTGCGCTCTCTGTAGATATGAAAAGAAAAGGGGATATGGCCAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAACTTGGAACGCCTGCGCAACCATACCGCCGAAAAATTGAttca                                                                                                                             <  2:566319/140‑3 (MQ=255)

            gTTACTGGAGGCGTTGCCTGAACCTGTGCTCTCAGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACg                                                                                                                           >  2:4183652/1‑140 (MQ=255)

                cTGGAGGCGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGCCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCtt                                                                                                                       <  1:4115643/140‑1 (MQ=255)

                      gCGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAAttt                                                                                                                 >  2:3590271/1‑140 (MQ=255)

                       cGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAGAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAAtttt                                                                                                                >  2:1055635/1‑140 (MQ=255)

                        gTTGCCTGAACCTGTGCTCTCTGTCGATATGAAGCGCAAAGTGGATCTGGCGAACCCGGCGAGCTGTCAGCTCGTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAAttttt                                                                                                               >  2:612927/1‑140 (MQ=255)

                        gTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAAttttt                                                                                                               >  1:4595212/1‑140 (MQ=255)

                        gTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAAttttt                                                                                                               >  1:1122820/1‑140 (MQ=255)

                        gTTGCCTGAACCTGTGCTCTCTGTCGAGATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGGTCGCCTGCGCAACCATACGGCCGCACAATTGATTAACGGCTTTAAttttt                                                                                                               >  2:2685756/1‑140 (MQ=255)

                          tGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTa                                                                                                             >  1:4633890/1‑140 (MQ=255)

                          tGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTa                                                                                                             >  2:70358/1‑140 (MQ=255)

                          tGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATGGATTAACGGCTTTAATTTTTTa                                                                                                             >  2:4089417/1‑140 (MQ=255)

                          tGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCAGCACAATTGATTAACGTCTTTAATTTTTTa                                                                                                             >  2:2456906/1‑140 (MQ=255)

                          tGCCTGAACCTGTGCTCTCTGGCGATCTGAAAAGCAAAGGGGATATGGCGAACCAGGCGAGCGGTCACCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACTGCCGCACAATTCATTAACGGCTTTAATTGTTTa                                                                                                             >  2:2244591/1‑140 (MQ=255)

                           gCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTAc                                                                                                            >  2:2441742/1‑140 (MQ=255)

                             cTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGCTATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGt                                                                                                          <  2:179998/140‑1 (MQ=255)

                             cTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGt                                                                                                          <  2:1391932/140‑1 (MQ=255)

                                  ccTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCt                                                                                                     <  1:2822778/140‑1 (MQ=255)

                                     gtgCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGa                                                                                                  <  1:2258133/140‑1 (MQ=255)

                                      tgCTCTCTTCCGATATGAAACGCAAAGTGGAGATGGCGAACCCGGCGAGCTGTCAGCTTGTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGaa                                                                                                 >  2:3114949/1‑140 (MQ=255)

                                      tgCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTGCGTTGGCTGGaa                                                                                                 >  1:4452647/1‑140 (MQ=255)

                                      tgCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGaa                                                                                                 >  2:2158290/1‑140 (MQ=255)

                                      tgCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGaa                                                                                                 >  1:2360954/1‑140 (MQ=255)

                                      tgCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGaa                                                                                                 >  1:832216/1‑140 (MQ=255)

                                      tgCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGaa                                                                                                 >  2:2616871/1‑140 (MQ=255)

                                      tgCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGaa                                                                                                 >  1:4744768/1‑140 (MQ=255)

                                           tctGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGa                                                                                            >  1:100067/1‑140 (MQ=255)

                                           tctGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGa                                                                                            >  1:100293/1‑140 (MQ=255)

                                           tctGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTATCAGCATTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGa                                                                                            >  2:80667/1‑140 (MQ=255)

                                           tcggTCGATATGAAGAGCAAAGTGGAGATGGCGAACCCGTCGAGCTGTCAGCTTGTTGGACAAAGATTGGATCGCCTGCGCGACCATACCGCCGCACCATTGATTAACGGCTTTAATTTGTTATGGTGGCCGGAAAGCGa                                                                                            >  2:4955736/4‑140 (MQ=255)

                                             tGTCGATATGAAAAGCAAAGTGGATATGGCAAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAAc                                                                                          >  1:3113238/1‑140 (MQ=255)

                                                cGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGc                                                                                       <  1:715599/140‑1 (MQ=255)

                                                 gATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCa                                                                                      >  2:1985477/1‑140 (MQ=255)

                                                  atatGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCaa                                                                                     <  2:1472995/140‑1 (MQ=255)

                                                  atatGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTGTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACTGTGGCTGGAAAGCGAACCGCaa                                                                                     >  2:4073538/1‑140 (MQ=255)

                                                     tGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGAt                                                                                  >  2:1681789/1‑140 (MQ=255)

                                                     tGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGAt                                                                                  >  1:1889286/1‑140 (MQ=255)

                                                      gAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGAtt                                                                                 <  2:1833756/140‑1 (MQ=255)

                                                       aaaaGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTc                                                                                >  2:2417102/1‑140 (MQ=255)

                                                        aaaGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCg                                                                               <  2:1671891/140‑1 (MQ=255)

                                                           gCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCGTTTTGGGCAAAAATTGGATCGCCTGCGCACCCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCAt                                                                            <  2:5101885/140‑1 (MQ=255)

                                                            cAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATa                                                                           <  2:4729090/140‑1 (MQ=255)

                                                             aaaGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATaa                                                                          <  1:4841874/140‑1 (MQ=255)

                                                             aaaGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATaa                                                                          <  1:2001387/140‑1 (MQ=255)

                                                             aaaGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATaa                                                                          <  1:203184/140‑1 (MQ=255)

                                                              aaGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAAc                                                                         >  1:2435046/1‑140 (MQ=255)

                                                               aGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACg                                                                        >  1:1527913/1‑140 (MQ=255)

                                                               aGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACg                                                                        >  2:674137/1‑140 (MQ=255)

                                                                  ggATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGc                                                                     <  2:458273/140‑1 (MQ=255)

                                                                  ggATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGc                                                                     <  1:1130538/140‑1 (MQ=255)

                                                                    atatGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCAt                                                                   >  2:46999/1‑140 (MQ=255)

                                                                     tatGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATg                                                                  <  1:1234717/140‑1 (MQ=255)

                                                                     tatGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATg                                                                  <  2:1443774/140‑1 (MQ=255)

                                                                     tatGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATg                                                                  <  1:4520024/140‑1 (MQ=255)

                                                                      atGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGt                                                                 <  1:1370831/140‑1 (MQ=255)

                                                                         gCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGTAAGATTCGCATAACGAGCATGTCGt                                                              <  2:4680484/140‑1 (MQ=255)

                                                                             aCCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCcgcac                                                                                                                                       >  1:3538923/1‑63 (MQ=255)

                                                                             aCCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCAt                                                                   <  2:3843125/131‑1 (MQ=255)

                                                                             aCCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCAt                                                                   >  1:3843125/1‑131 (MQ=255)

                                                                             aCCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGttatt                                                          >  2:3998358/1‑140 (MQ=255)

                                                                             aCCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGttatt                                                          >  2:4238348/1‑140 (MQ=255)

                                                                              cccGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGttatta                                                         >  1:3947337/1‑140 (MQ=255)

                                                                                   cGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATggg                                                    >  1:1024175/1‑140 (MQ=255)

                                                                                   cGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATggg                                                    >  1:1157805/1‑140 (MQ=255)

                                                                                   cGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATggg                                                    >  1:4266865/1‑140 (MQ=255)

                                                                                   cGAGCTGTCAGCTTTTTAGACAAAATTAGGATCGCCTGCACAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTAGAAAGCGAACCACAAGATTCCCATAACGAGCACGTCGTTATTAATggg                                                    <  2:3441897/140‑1 (MQ=255)

                                                                                    gAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGc                                                   <  1:1477449/140‑1 (MQ=255)

                                                                                    gAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGc                                                   <  1:3832522/140‑1 (MQ=255)

                                                                                    gAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGc                                                   <  1:5084139/140‑1 (MQ=255)

                                                                                    gAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGc                                                   <  2:3424875/140‑1 (MQ=255)

                                                                                        tGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGaa                                               >  1:1140086/1‑140 (MQ=255)

                                                                                          tCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAAtt                                             >  1:1700876/1‑140 (MQ=255)

                                                                                                  ttGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGTCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTATTGGGCAGAATTTCCTGATg                                     >  2:1533143/1‑140 (MQ=255)

                                                                                                  ttGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATg                                     <  2:3241384/140‑1 (MQ=255)

                                                                                                  ttGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATg                                     <  2:3300908/140‑1 (MQ=255)

                                                                                                  ttGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATg                                     <  2:2907814/140‑1 (MQ=255)

                                                                                                  ttGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATg                                     <  2:100067/140‑1 (MQ=255)

                                                                                                  ttGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCAGCACAATTGATTAATGGCCTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATg                                     <  1:3710069/140‑1 (MQ=255)

                                                                                                             ttGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGcc                          <  1:559007/140‑1 (MQ=255)

                                                                                                                    gCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCAt                                                                   <  2:3360549/92‑1 (MQ=255)

                                                                                                                    gCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCAt                                                                   >  1:3360549/1‑92 (MQ=255)

                                                                                                                     ccTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATc                  >  2:2604442/1‑140 (MQ=255)

                                                                                                                     ccTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATCAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATc                  >  2:4316589/1‑140 (MQ=255)

                                                                                                                     catGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCGTAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATc                  >  1:4152626/3‑140 (MQ=255)

                                                                                                                       tGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCtt                <  2:2277555/140‑1 (MQ=255)

                                                                                                                       tGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCtt                <  1:2793888/140‑1 (MQ=255)

                                                                                                                       tGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCAGGTCGTTATTAATGGGCAGAAGTTCCTGATGGAGATTACGCCTGTTTATCtt                <  1:2707015/140‑1 (MQ=255)

                                                                                                                        gcgcAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTc               >  1:1631496/1‑140 (MQ=255)

                                                                                                                              ccATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGACTGTTTATCTTCAGGATg         >  1:2982623/1‑140 (MQ=255)

                                                                                                                               cATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTCAGGATGa        <  1:3635291/140‑1 (MQ=255)

                                                                                                                                aTACCGCCGCACAATTGATTAACGGCTTTAATTCTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTCAGGATGaa       >  1:5033427/1‑140 (MQ=255)

                                                                                                                                 tACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACg                                                                                                           >  2:1088188/1‑39 (MQ=255)

                                                                                                                                 tACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTCAGGATGaaa      <  1:4001365/140‑1 (MQ=255)

                                                                                                                                 tACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTCAGGATGaaa      <  1:4831727/140‑1 (MQ=255)

                                                                                                                                 tACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTCAGGATGaaa      <  2:2993002/140‑1 (MQ=255)

                                                                                                                                    cgccgcACAATTGATTAACGGCTTTAGTTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGCATTTCCTAATGGAGATTACGCCTGTTTATCTTCAGAATGAAAATg   <  2:2526980/140‑1 (MQ=255)

                                                                                                                                    cgccgcACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCGTCAGGATGAAAATg   >  1:334342/1‑140 (MQ=255)

GGCGTTGAGCGCGTTACTGGAGGCGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCACACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTCAGGATGAAAATGA  >  NZ_CP025268/1391777‑1392049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`