| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,647,294 | T→C | intergenic (+264/+14) | CXP41_RS24205 → / ← ydfT | hypothetical protein/antitermination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,647,294 | 0 | T | C | 99.6% | 740.1 / ‑4.7 | 221 | intergenic (+264/+14) | CXP41_RS24205/ydfT | hypothetical protein/antitermination protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (97/123); total (97/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.79e-01 | |||||||||||
Only 100 of 221 total aligned reads displayed.
ACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTTCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACTGATAATCGGTCAGGTCTGGT > NZ_CP025268/1647157‑1647428 | ccATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAg > 1:334275/1‑140 (MQ=255) gCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCaaaa > 2:2576458/1‑140 (MQ=255) gCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCaaaa < 1:5058282/140‑1 (MQ=255) gCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCaaaa > 1:1325477/1‑140 (MQ=255) gCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCaaaa > 1:1653668/1‑140 (MQ=255) ccccCTTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCaaaaa > 1:658295/1‑140 (MQ=255) ccccATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAATAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCaaaaa > 1:4327759/1‑140 (MQ=255) ccccATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCaaaaa > 1:3837429/1‑140 (MQ=255) tttAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCAtt > 1:3147050/1‑140 (MQ=255) aaaGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTAt > 1:1021919/1‑140 (MQ=255) acaAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGt < 1:4246586/140‑1 (MQ=255) aaaaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCa > 1:4856637/1‑140 (MQ=255) aaaaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCa > 1:3360851/1‑140 (MQ=255) aaaaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCa > 2:310874/1‑140 (MQ=255) aaaaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCa > 1:314181/1‑140 (MQ=255) aaaaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCa > 2:3143970/1‑140 (MQ=255) aaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCAcc < 2:2935622/140‑1 (MQ=255) aaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCAcc < 2:2014220/140‑1 (MQ=255) gCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCt > 1:2257703/1‑140 (MQ=255) gCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCt > 1:5010130/1‑140 (MQ=255) gCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGCGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATGTCGTCACCTTCCt > 2:4496829/1‑140 (MQ=255) tcaGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAAtt > 2:3032746/1‑140 (MQ=255) aGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTgc > 1:4073802/1‑140 (MQ=255) tttCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCcg > 2:3358389/1‑140 (MQ=255) ttCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCcgc > 1:229595/1‑140 (MQ=255) cTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGt < 2:709958/140‑1 (MQ=255) cTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGt < 2:4010011/140‑1 (MQ=255) cTACGTTTTCTTAACGTCGGGTATACCAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACCTCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGt < 2:1596501/140‑1 (MQ=255) tttCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGctt > 1:4565155/1‑140 (MQ=255) cTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGcttctt < 1:775386/140‑1 (MQ=255) cTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCACGTATGcttctt < 2:5137028/140‑1 (MQ=255) tAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTcc > 1:2431931/1‑140 (MQ=255) aCGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTCTCCATATTTTCTGAAAAATGCAAACATAATGTCGCCATCTCCAGCAAACATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTg < 1:2087006/140‑1 (MQ=255) aCGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTg > 1:2141966/1‑140 (MQ=255) cGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGc < 2:1387997/140‑1 (MQ=255) gggTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGc < 1:1847412/140‑1 (MQ=255) gTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTCAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCAc < 2:2984174/140‑1 (MQ=255) tataCAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACt < 1:4781330/140‑1 (MQ=255) aCAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTg > 1:2456462/1‑140 (MQ=255) aaaGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGtt < 2:4761391/140‑1 (MQ=255) aaaGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGtt < 1:3912913/140‑1 (MQ=255) aGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTAc < 1:3708723/140‑1 (MQ=255) aGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTAc < 1:4731975/140‑1 (MQ=255) aGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTAc < 1:3456130/140‑1 (MQ=255) aGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTAc > 1:2657537/1‑140 (MQ=255) aGCCCATCGTTGAAAAAATTTTATCCATATTTTTTCAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTAc < 2:1840911/140‑1 (MQ=255) gCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTAcc > 1:122931/1‑140 (MQ=255) gCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTAcc > 1:1627877/1‑140 (MQ=255) cccATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCa > 2:2166629/1‑140 (MQ=255) cccATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCa > 2:1981521/1‑140 (MQ=255) ccATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAg < 1:2351603/140‑1 (MQ=255) aTCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCACACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGtt < 2:3933043/140‑1 (MQ=255) aTCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCaaa > 2:212170/1‑66 (MQ=255) aTCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGtt > 1:2555510/1‑140 (MQ=255) cGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTa > 1:1107900/1‑140 (MQ=255) aaaaaaTTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAAt < 2:486885/140‑1 (MQ=255) aaTTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACg < 1:4637322/140‑1 (MQ=255) aaTTTTATCCATATTTTTTGAAAAATCCAACCATCATGTCGCCCTATCCAGCAAAAATCATTTTTCTCGTCATCTTCCTCAATCGCGCCTCCTCGTATGCTTCTTGCGGCCTGCATTATGTTACCCGTTTACCAATGTCg < 2:4689940/140‑1 (MQ=255) aTTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGt < 2:1759102/140‑1 (MQ=255) aTTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGt < 1:735853/140‑1 (MQ=255) aTTTTATCCATATTTTTTCAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGt < 2:5067878/140‑1 (MQ=255) aTCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCCGCAAAAATCATTTATCCCGTCACCTTCCTCAATTGCGCTTCCGCGTACGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCa > 2:822666/1‑140 (MQ=255) aTCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCa < 2:3827680/140‑1 (MQ=255) tcaatatTTCTTGAAAAATGCCACCATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCCCTTTGTTACCAGTTTACCAATGACGTCCGCAt < 2:4226653/137‑1 (MQ=255) tCCCTATTTTTTTAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 2:3475292/140‑1 (MQ=255) tCCATATTTTTTGCACAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCACTTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTCCCAATGCCGTCCGCAt < 2:4338975/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCATACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGTTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 2:4073802/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCACACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGATTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 2:2882683/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCACACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATCGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 1:3206316/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCGATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 1:5190328/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 2:1182401/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 1:425386/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 2:2657537/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 1:948855/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 2:2364444/140‑1 (MQ=255) tCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCAt < 2:2054846/140‑1 (MQ=255) ccctatTTTTTCAAAAATCCAAACATCATGTCGCCATCTCAAGCAAATATCATTTATCTCGTCACCTTCCTTAATTGCGCTTCCGCGTATTCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACTAATGACGTCCGCATa < 2:1775412/137‑1 (MQ=255) ccATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATa < 1:2192553/140‑1 (MQ=255) ccATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATa < 2:4278496/140‑1 (MQ=255) ccATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATa < 2:2046993/140‑1 (MQ=255) ccATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATa < 1:2807106/140‑1 (MQ=255) ccATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATa < 2:4992508/140‑1 (MQ=255) atatTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATAcc < 1:724639/140‑1 (MQ=255) atatTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATAcc < 1:2035645/140‑1 (MQ=255) atatTTTTTGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTCCCTGCCAGCACTTTGTTACCAGTTTACCAATGACATCCGCATAcc < 2:2404085/140‑1 (MQ=255) acatTTTTTGAAAAATGCAAACACCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTACCGCGTATGCTTCTTCCCGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCACAcc < 2:324454/138‑1 (MQ=255) ttttttGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCt < 1:617657/140‑1 (MQ=255) tttGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGTTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTtat < 1:3471503/140‑1 (MQ=255) ttGAAAAATGCAAACATCATGTCGCCATCTCCAGCAAAACTCATTTATCTCGTCCCCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCGCTTTAACAATGACGTCCGCATACCCCTtata < 2:2515598/140‑1 (MQ=255) tGAAAAATGCAAACATCATGTCGCCTTCTCCAGCAAAAATCATTTATCTCGGCACCTTCCTCCAGTGCGCTTCCGCGTATGCTTCTTCCCGCCCGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTcatcc < 2:709001/140‑3 (MQ=255) aaaTGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACt < 1:1909856/140‑1 (MQ=255) aaaTGCAAACATCATGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACt < 2:1451746/140‑1 (MQ=255) atcatGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACTGATAATCGGt < 2:1022131/140‑1 (MQ=255) atcatGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACTGATAATCGGt < 1:1269196/140‑1 (MQ=255) tcctGTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTCACCAGTTGACCAATGACGTCCGCATACCCCTTATACCACTGATAATCGGTc < 2:1632616/137‑1 (MQ=255) ctGTCGCCATCTCCAGCCCAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTACGCATACTCCTTATACCACTGATATTCGGTCAg > 2:630576/2‑140 (MQ=255) gTCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACTGATAATCGGTCAGGt < 1:2802011/140‑1 (MQ=255) tCGCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCCGCCCTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACTGATAATCGGTCAGGTc > 1:2941237/1‑140 (MQ=255) gCCATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACTGATAATCGGTCAGGTCTg > 1:2402486/1‑140 (MQ=255) cATCTCCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACTGATAATCGGTCAGGTCTGGt > 2:4399831/1‑140 (MQ=255) | ACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCATCTTCAGCAAAAATCATTTATCTCGTCACCTTCCTCAATTGCGCTTCCGCGTATGCTTCTTCCTGCCAGCACTTTGTTACCAGTTTACCAATGACGTCCGCATACCCCTTATACCACTGATAATCGGTCAGGTCTGGT > NZ_CP025268/1647157‑1647428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |