Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 1,661,562 A→G *187* (TAA→TAG speG → spermidine N1‑acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252681,661,5620AG99.2% 883.6 / NA 269*187* (TAA→TAGspeGspermidine N1‑acetyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (149/116);  total (149/120)
Fisher's exact test for biased strand distribution p-value = 1.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 269 total aligned reads displayed.

GTTGAAGGTGAATTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAACATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACAT  >  NZ_CP025268/1661425‑1661695
                                                                                                                                         |                                                                                                                                     
gTTGAAGGTGAATTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCa                                                                                                                                     <  2:3038567/140‑1 (MQ=255)
  tGAAGGTGAATTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCAtt                                                                                                                                   <  1:848172/140‑1 (MQ=255)
  tGAAGGTGAATTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCAtt                                                                                                                                   >  2:4962090/1‑140 (MQ=255)
  tGAAGGTGAATTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCAtt                                                                                                                                   <  2:3413196/140‑1 (MQ=255)
          aaTTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGTCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATtaataataa                                                                                                                           >  2:48907/1‑140 (MQ=255)
           aTTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTaataataat                                                                                                                          <  2:5046797/140‑1 (MQ=255)
                  cACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGt                                                                                                                   <  2:4485756/140‑1 (MQ=255)
                    cGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTAt                                                                                                                 >  1:5021868/1‑140 (MQ=255)
                          cTTTATTGATGGTCAACATCGTAATGCCTTTCACATGTGTATATTCCAGCATCAGTATCTGGCGGAGCACAAACCACCGTGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGa                                                                                                           <  2:4303868/140‑1 (MQ=255)
                          cTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGa                                                                                                           <  2:3375362/140‑1 (MQ=255)
                          cTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGa                                                                                                           <  2:3778015/140‑1 (MQ=255)
                          cTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGa                                                                                                           <  1:3731262/140‑1 (MQ=255)
                          cTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGa                                                                                                           <  1:2717703/140‑1 (MQ=255)
                                 aaTGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTa                                                                                                    >  2:2771168/1‑140 (MQ=255)
                                  aTGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTaa                                                                                                   >  1:3466916/1‑140 (MQ=255)
                                     gTCAATATCGTAATGCCATTCGCATGTGTATATTCTAGCATCAGTATCTGGCAGAGCACAAAACAAAGGGTCAGACTGTCCTGAAGACGACCGCACAATAGCACGAACAATAATCGATCGTATATTTTATGGTGTaaaag                                                                                                >  2:1932201/1‑138 (MQ=255)
                                     gTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAAcc                                                                                                >  1:2077559/1‑140 (MQ=255)
                                     gTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAAcc                                                                                                >  1:4486388/1‑140 (MQ=255)
                                     gTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAAcc                                                                                                >  2:2434846/1‑140 (MQ=255)
                                     gTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGGCAGACTCTCATGAAGCCGACCGCACAATAGCAGTAAGAATAATCGATCTTATTTTTGATGGTGTAAAcc                                                                                                >  2:1310978/1‑140 (MQ=255)
                                        aaTATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGt                                                                                             >  1:3843657/1‑140 (MQ=255)
                                              gTAATGCCATTCGCATGTGTATATTCCGGCATCAGTAGCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGAcg                                                                                       <  2:508622/140‑1 (MQ=255)
                                               tAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGTACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCCTTCGAcgg                                                                                      >  2:3804875/1‑140 (MQ=255)
                                               tAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGAcgg                                                                                      >  2:3982725/1‑140 (MQ=255)
                                               tAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGAcgg                                                                                      >  2:160475/1‑140 (MQ=255)
                                               tAATGCCATTCGCAGGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGAcgg                                                                                      >  1:3320272/1‑140 (MQ=255)
                                                aaTGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGAcggc                                                                                     <  1:5027533/140‑1 (MQ=255)
                                                aaTGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGAcggc                                                                                     <  2:3017459/140‑1 (MQ=255)
                                                aaTGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGAATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGAcggc                                                                                     <  1:2501658/140‑1 (MQ=255)
                                                    ccATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGt                                                                                 >  1:1026137/1‑140 (MQ=255)
                                                    ccATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGt                                                                                 >  2:4698880/1‑140 (MQ=255)
                                                      aTTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGttt                                                                               >  1:4840238/1‑140 (MQ=255)
                                                      aTTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTATCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGttt                                                                               <  1:4317099/140‑1 (MQ=255)
                                                       ttCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGtttt                                                                              >  2:2337548/1‑140 (MQ=255)
                                                       ttCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGtttt                                                                              >  1:23522/1‑140 (MQ=255)
                                                         cGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTAc                                                                            >  1:4153937/1‑140 (MQ=255)
                                                          gCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACt                                                                           <  1:444353/140‑1 (MQ=255)
                                                            aTGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTcc                                                                         <  1:4649573/140‑1 (MQ=255)
                                                            aTGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTcc                                                                         <  1:2852234/140‑1 (MQ=255)
                                                               tgtATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGa                                                                                                           <  2:2937464/103‑1 (MQ=255)
                                                               tgtATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAAGCGATCGTATTTTTGa                                                                                                           >  1:2937464/1‑103 (MQ=255)
                                                                 tataTTCCAGCATCAGTATCTGGCAGATCACAAACCACCGGGTCAGACTCTCCTGAAGCCGACCGCACACTCGCATTAATAATAACCGACCGTATTTTTGATGGTGTAAACCCGTTCGACGGCTGGTTTTACTCCTtcat                                                                    <  2:365702/140‑1 (MQ=255)
                                                                      tCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATcaaca                                                               <  1:2610549/140‑1 (MQ=255)
                                                                        cAGCATCAGTATCTGGTAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAAt                                                             <  1:2880246/140‑1 (MQ=255)
                                                                         aGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGa                                                                                                           >  2:3601406/1‑93 (MQ=255)
                                                                           cATCAGTATCTGGCAGAGCGCAAAACACCGGGTCAGACTCTCCTGAATCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTTATGGTGTAAACCCGTTCGACGGCGGGTTTTACACCTTCATCAACAATGAt                                                          >  2:1476036/1‑140 (MQ=255)
                                                                           cATCAGTATCTGGCAGAGCACAAAACCCCGGGTCAGCCTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGAt                                                          <  2:4567082/140‑1 (MQ=255)
                                                                           cATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAGGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGAt                                                          >  1:3244798/1‑140 (MQ=255)
                                                                           cATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGa                                                                                                           >  2:4997286/1‑91 (MQ=255)
                                                                           cATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGAt                                                          >  1:1899730/1‑140 (MQ=255)
                                                                           cATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGAt                                                          >  1:3545694/1‑140 (MQ=255)
                                                                           cATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGAt                                                          >  1:3980383/1‑140 (MQ=255)
                                                                           cATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGAt                                                          >  1:1240225/1‑140 (MQ=255)
                                                                           cATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTGTTACTCCTTCATCAACAATGAt                                                          >  1:4350760/1‑140 (MQ=255)
                                                                                gTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCt                                                     >  1:2961154/1‑140 (MQ=255)
                                                                                  aTCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGa                                                   <  1:3890203/140‑1 (MQ=255)
                                                                                    cTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACa                                                 <  1:2786770/140‑1 (MQ=255)
                                                                                      ggCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGt                                               >  2:103779/1‑140 (MQ=255)
                                                                                       gCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTc                                              <  2:4840238/140‑1 (MQ=255)
                                                                                         agagCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCa                                            <  1:2345146/140‑1 (MQ=255)
                                                                                         agagCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCa                                            <  1:1548802/140‑1 (MQ=255)
                                                                                           agCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCAcc                                          >  2:5057777/1‑140 (MQ=255)
                                                                                           agCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCAcc                                          >  1:2441405/1‑140 (MQ=255)
                                                                                           agCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCAcc                                          >  1:2484394/1‑140 (MQ=255)
                                                                                           agCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCAcc                                          >  1:1593383/1‑140 (MQ=255)
                                                                                           agCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCAcc                                          >  2:1959311/1‑140 (MQ=255)
                                                                                           agCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCAcc                                          >  1:900189/1‑140 (MQ=255)
                                                                                           agCACAAAACACCGGGGCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTGTTACTCCTTCATCAACAATGATTAGCTGACAGTCGAcc                                          >  2:2718251/1‑140 (MQ=255)
                                                                                             cacaAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCgg                                        >  2:4980925/1‑140 (MQ=255)
                                                                                               caAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGAt                                      >  1:4396797/1‑140 (MQ=255)
                                                                                                  aaCACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAg                                   >  1:3570994/1‑140 (MQ=255)
                                                                                                  aaCACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAg                                   >  2:56008/1‑140 (MQ=255)
                                                                                                    cacCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCg                                 <  1:1338050/140‑1 (MQ=255)
                                                                                                       cGGGTCAGCCTCTCCTCCAGCCGACCGCACCACAGCACTAATAATCATCGATCCTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTCTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGa                              <  2:3444460/140‑1 (MQ=255)
                                                                                                       cGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGa                              <  1:934670/140‑1 (MQ=255)
                                                                                                       cGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGa                              <  2:4222464/140‑1 (MQ=255)
                                                                                                       cGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGa                              <  1:1959311/140‑1 (MQ=255)
                                                                                                       cGGGTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGa                              >  2:106811/1‑140 (MQ=255)
                                                                                                       cGGGACAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTCCTCCTTCATCAACAATGATTAGCTGTCACTCCACCGGATTACCGTGa                              >  2:1202569/1‑140 (MQ=255)
                                                                                                         ggTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTCCTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACt                            <  2:1518599/140‑1 (MQ=255)
                                                                                                         ggTCAGACTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACt                            <  2:1929139/140‑1 (MQ=255)
                                                                                                               aCTCTCCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCata                      >  1:3382545/1‑140 (MQ=255)
                                                                                                                   tcCTGAAGCCGACCGCACAATGGCATTAAGAATAATCGATCGTATTGTTGATGGTGTAAACCCGTTCGACGGCGGGGTTGACTCCTTCATCAACAATGATTAGCTGACATTCCACCGGATTAGCGTGACTGTCATATTca                  >  2:835000/1‑140 (MQ=255)
                                                                                                                   tcCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCa                                            <  2:714428/114‑1 (MQ=255)
                                                                                                                   tcCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCa                                            >  1:714428/1‑114 (MQ=255)
                                                                                                                   tcCTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTca                  <  1:3023718/140‑1 (MQ=255)
                                                                                                                    tcTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACACGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATCAGCTGACAGTCAACCGGATTAGCATGACTGTCGTATTcac                 >  2:4304746/2‑140 (MQ=255)
                                                                                                                    ccTGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGCTGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAAAAATGATTAGCTGACAGTCCACCGGATTAGCGTGACGGTCATATTcac                 >  2:57750/1‑140 (MQ=255)
                                                                                                                      tGAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAg               <  1:4542630/140‑1 (MQ=255)
                                                                                                                       gAAGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGc              <  2:2015193/140‑1 (MQ=255)
                                                                                                                        aggcagACCGCACAATAGAATTAATAATAATCGATCGTGTTTTTGATGGTGTAAACCCGTTCGCCGGCGGGTTTTAATCCTTCATCACCAATGATTAGCTGACAGTCCCCCGGATTAGCGTGACTGTCATATTCCCAGct             <  2:2108880/135‑1 (MQ=255)
                                                                                                                        aaGCCGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGct             <  1:4970318/140‑1 (MQ=255)
                                                                                                                            cGACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGt         <  1:130769/140‑1 (MQ=255)
                                                                                                                             gACCGCACAATAGCATTAATAATAATCGATCTTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGGCCACCGGATCAGCTTGACTGTCATATCTACATCTCTGtt        >  2:2941942/1‑140 (MQ=255)
                                                                                                                             gACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGtt        >  1:1991108/1‑140 (MQ=255)
                                                                                                                             gACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGtt        >  1:1783184/1‑140 (MQ=255)
                                                                                                                             gACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGtt        >  1:1123701/1‑140 (MQ=255)
                                                                                                                             gACCGCACAATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGAGTAGCGTGTCTGTCATATTCACAGCTCTGtt        >  2:1352936/1‑140 (MQ=255)
                                                                                                                                  cacaATAGCATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACa   <  2:3256185/140‑1 (MQ=255)
                                                                                                                                   acaTTATCATTATTAATATTCGATCGTATTTTTGCGGCTGTAATCCCGTTCCCCGGCGGCTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGAATTAGCGTGACTGCCATATTCACAGCTCTGTTTTACAt  <  2:1758979/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                     
GTTGAAGGTGAATTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAACATTAATAATAATCGATCGTATTTTTGATGGTGTAAACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACAT  >  NZ_CP025268/1661425‑1661695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: