| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,749,559 | T→C | G428G (GGT→GGC) | mdtK → | multidrug efflux MATE transporter MdtK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,749,559 | 0 | T | C | 99.6% | 922.5 / NA | 282 | G428G (GGT→GGC) | mdtK | multidrug efflux MATE transporter MdtK |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (200/80); total (201/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 282 total aligned reads displayed.
ATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGTCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACG > NZ_CP025268/1749423‑1749694 | aTACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTg > 1:3099228/1‑140 (MQ=255) tACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGa > 1:1823888/1‑140 (MQ=255) aCGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGAc > 2:959871/1‑140 (MQ=255) aCGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGAc > 1:4114932/1‑140 (MQ=255) aCGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGAc > 1:4258652/1‑140 (MQ=255) aCGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGAc > 2:1664210/1‑140 (MQ=255) aCGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGAc > 1:170898/1‑140 (MQ=255) aCGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGAc > 2:3619346/1‑140 (MQ=255) aCGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGAc > 2:749846/1‑140 (MQ=255) aCGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCGGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATATGCTTTA‑TTATTGGCCTGAc > 2:1535876/1‑140 (MQ=255) aCGCGATCCACACTCTCTATTACCTTTACGGCTTACTGGGTGCTGGGCTTGTCAAACGGCTATAACCGGGCACTGACCGCTCTATTCGTTGAAAATATAGGGCCAGTAGGTTTTTCGATTGGTTTTA‑TTATTGGCCTGAc > 2:1635611/1‑140 (MQ=255) cgcgTTCCATTTTCTATATTCCCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTTTGGGGCCGGCACGCCTCTGGCTAGGATTTA‑TTATAGGCCTGACg < 2:1611883/140‑1 (MQ=255) ttCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCCTCTGGATAGGCTTTA‑CTCTTTCCCTTACGTCgg < 2:4564916/140‑1 (MQ=255) tCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCTGGCAGGGTTCTGGATGGGCTTTA‑TTATTGGCCTGACGTCGGc < 2:4977045/140‑1 (MQ=255) ccATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCGATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTGCTGGATAGGCTTTA‑TTATTGTCCTGACGTCGGCa > 1:1563695/1‑140 (MQ=255) ttataTTACCTTTACAGCTTACTTGGTGCTGGGCTTGCCAAGAGGCTATATTCTGGCACTGACCGATCTGATCGTTGAACCTATTCTGCCAGCAGGCTTCTGACTAGGCTTTA‑TTATTTGCTTGACGTCGGCAGCCATTa < 2:2695060/139‑1 (MQ=255) tatTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTatga < 2:3149246/140‑1 (MQ=255) tACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTatgatga > 1:4228067/1‑140 (MQ=255) tACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTatgatga > 1:2734257/1‑140 (MQ=255) aCCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTatgatgat > 1:1036672/1‑140 (MQ=255) ccTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCGGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTatgatgatg < 2:3190692/140‑1 (MQ=255) ccTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTatgatgatg < 2:3487590/140‑1 (MQ=255) ttACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTg > 1:1179165/1‑140 (MQ=255) ttACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTg > 1:1977492/1‑140 (MQ=255) ttACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTg > 2:4604386/1‑140 (MQ=255) aCGTCTTACTGGGTGCTGAGCTTGCCAAGCGGCTATATTCGGGGACTGCGGGAGCTGGTCATTGAACGTATAGGGCCGGCAGGAGTCTGGATAGGCTTTA‑TTATTGGCCGGTAGGCGGCAGCCAATATGATGATGTTgtg > 2:3814334/1‑138 (MQ=255) aCGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCg > 1:3528425/1‑140 (MQ=255) aCGGCGTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGCCGTCGGCAGCCATTATGATGATGTTGCg > 2:306690/1‑140 (MQ=255) ttACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGc > 1:5012944/1‑140 (MQ=255) tACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCg > 1:2283711/1‑140 (MQ=255) tGGGTGCTGGGCTTTCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAAGCTTCTGGATAGGCTTTA‑TTATTGGGCTGGCGCCGGCACCCATTATGAAGATGTTTCGTATTCGGtt > 2:4410754/1‑140 (MQ=255) cTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCa < 2:2612342/140‑1 (MQ=255) ggttGCCAAGCGGCTATATTCTGCCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGATTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGt < 2:5208282/138‑1 (MQ=255) gCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTTTTTGACTGGTACGGCGCTGGCCGGGATCTACTCTTTCCTCT‑TCGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGt < 2:3861534/140‑1 (MQ=255) ttGCCAAGCGGCTATCTTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCt > 1:2897828/1‑140 (MQ=255) ttGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCt > 2:1014190/1‑140 (MQ=255) ttGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGGTGCGTATGCGGTTCCTGCAACGTCt > 1:4732694/1‑140 (MQ=255) gCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGc > 1:3778430/1‑140 (MQ=255) gCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGc > 1:1861604/1‑140 (MQ=255) gCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTGTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGc > 1:1381188/1‑140 (MQ=255) aGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAACCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTc < 2:4525711/140‑1 (MQ=255) gCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCa > 2:3680650/1‑140 (MQ=255) cTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCca < 2:3099228/140‑1 (MQ=255) tataTTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCcat < 2:595285/140‑1 (MQ=255) tataTTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCcat < 2:2322768/140‑1 (MQ=255) tatTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCcatca > 1:832221/1‑140 (MQ=255) ggCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCACGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGc < 2:5063426/140‑1 (MQ=255) gCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCGATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCa > 1:2860060/1‑140 (MQ=255) gCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCa > 1:2160253/1‑140 (MQ=255) cTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACg > 1:2340447/1‑140 (MQ=255) gACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAg > 1:42829/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTatga < 2:234788/82‑1 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTatga > 1:234788/1‑82 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATTCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGc > 2:552955/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCGACGTCTGCCGTCAGCCATCATTCTGCAACGAGc > 1:3168468/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGc > 2:1335600/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGc > 1:1286139/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGc > 2:1093453/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGc > 1:4328991/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGc > 1:331175/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGc > 1:3416493/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTAACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTACTGCAACGTCTGCCGTCAGCCATTATTCTGCAACCAGc > 2:3369420/1‑140 (MQ=255) aCCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑GTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGc > 1:1890689/1‑140 (MQ=255) cGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGCTAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATGATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCAt < 2:3713749/140‑1 (MQ=255) cGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCCTCAGCCATCATTCTGCAACGAGCAt < 2:4678678/140‑1 (MQ=255) aTCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATcc < 1:568844/140‑1 (MQ=255) cTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCg < 2:4225795/140‑1 (MQ=255) cTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑CTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCg < 2:127508/140‑1 (MQ=255) tGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGc < 2:2647458/140‑1 (MQ=255) gTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCta > 2:4477351/1‑140 (MQ=255) tCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCtaa > 1:2535636/1‑140 (MQ=255) gTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCtaata > 2:2564249/1‑140 (MQ=255) gAACCTATGGGGCCGGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAg > 2:3937775/1‑140 (MQ=255) gAACCTATGGGGCCAGCAGGCTTCTGGCTAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTGTGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAg > 2:1223788/1‑140 (MQ=255) gAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAg > 1:1455681/1‑140 (MQ=255) gAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAg > 1:1613514/1‑140 (MQ=255) ccTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACa < 2:2785878/140‑1 (MQ=255) cTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACaa > 2:4061998/1‑140 (MQ=255) tGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCTCTAATAAAGACAAGgc > 1:2879421/1‑140 (MQ=255) gggCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGgcgc < 2:3336493/140‑1 (MQ=255) gCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCg > 1:5147045/1‑120 (MQ=255) ccAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAAc > 2:1935970/1‑140 (MQ=255) cagcagGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAAcc > 1:4819298/1‑140 (MQ=255) agcagGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCt > 1:3019225/1‑140 (MQ=255) agcagGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCt > 1:4674641/1‑140 (MQ=255) agcagGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCt > 1:2612464/1‑140 (MQ=255) agcagGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCt > 2:776252/1‑140 (MQ=255) agcagGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGGATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCt > 2:1079268/1‑140 (MQ=255) cagGCTTCTGGATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTc > 1:940600/1‑140 (MQ=255) agGCTTCTGCATAGGCTTTA‑TTATTTGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCa < 2:2918882/140‑1 (MQ=255) ttCTGGATAGGCTTTA‑TTATTAGCCTGCCGTCGGCAGCCATTTTGTTGTTGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATGATTCTGAAACGAGCATCCCGCTAATAAATACAAGGCGCAACCTTCACggg > 2:5022313/1‑140 (MQ=255) gATAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCAGCTAATAAAGACAAGGCGCAACCTTCACGGGTTgcg > 2:3008809/1‑140 (MQ=255) tAGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGcc < 2:1821979/140‑1 (MQ=255) aGGCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCt < 2:1431130/140‑1 (MQ=255) gCTTTA‑TTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGt > 1:3281861/1‑140 (MQ=255) a‑ttattGGCCTGACGTCGGCAGCCATTCTGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTAtttt > 1:1330131/1‑140 (MQ=255) a‑ttattGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTTCAACGTCTGCCGTCAGCCATCATTTTTCCACGAGCATCCCGCTAATAAAGACAGTGCGCAACCTGCACGGGTTGAGCCCGtttttt > 2:2057414/1‑140 (MQ=255) a‑ttattGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGAc < 2:4296383/106‑1 (MQ=255) ttGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACg < 2:972207/140‑1 (MQ=255) ttGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACg < 1:1174207/140‑1 (MQ=255) | ATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTA‑TTATTGGTCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACG > NZ_CP025268/1749423‑1749694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |