Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 2,321,062 T→C *950* (TAA→TAG)  rcsC ← two‑component system sensor histidine kinase RcsC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252682,321,0620TC100.0% 912.5 / NA 271*950* (TAA→TAG) rcsCtwo‑component system sensor histidine kinase RcsC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (132/139);  total (132/139)

Only 100 of 271 total aligned reads displayed.

GCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCTTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCA  >  NZ_CP025268/2320928‑2321197
                                                                                                                                      |                                                                                                                                       
gcgTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAATTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCCGCGTAAACGCCGTATCCGTCCTACGa                                                                                                                                    >  2:165673/1‑140 (MQ=255)
        gCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCcgcg                                                                                                                            <  2:3332639/140‑1 (MQ=255)
        gCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCcgcg                                                                                                                            <  2:4851790/140‑1 (MQ=255)
        accTTATCCCGCCAACGAGACCCATTTGTTCAACAAATTACTATAAACTAGGCCAGATAAGACGCGTCAGCGTGGCACCTGCCATTTGCACTGAATGCCGGATGCCGCGTAAACGCCTTATCCCTCCTACGAATCCcgcg                                                                                                                            <  2:2530935/139‑1 (MQ=255)
           ttATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGAtt                                                                                                                         >  2:2467370/1‑140 (MQ=255)
             aTCAGGCCTACGATTCCAATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATGTGGTATTTGCACCGAATGCTGGATGCGGCGTAATTGCCTTATCCGTCCTACGAATCCCGCGCtttt                                                                                                                       >  2:5186734/1‑139 (MQ=25)
                cGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTg                                                                                                                    <  2:2000541/140‑1 (MQ=255)
                 ggCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGa                                                                                                                   >  1:2598264/1‑140 (MQ=255)
                  gCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGAc                                                                                                                  >  1:3404730/1‑140 (MQ=255)
                  gCCTACGAATCCCAGTATTTCAACAAATTTCATTAAAGTAGGCCAGCTAAGACGCGTCAGCGTACCATCTGGCATTTGCACTGAATGCCGGGTGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGAGATTTCCTGAc                                                                                                                  >  2:3922975/1‑140 (MQ=25)
                    cTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGCCGCGTCAGCGTCGCCTCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAGCGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGAccc                                                                                                                <  2:4171450/140‑1 (MQ=255)
                     tACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCct                                                                                                               <  2:3561149/140‑1 (MQ=255)
                       cGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCctct                                                                                                             <  2:2788786/140‑1 (MQ=255)
                       cGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCctct                                                                                                             <  2:2675500/140‑1 (MQ=255)
                       cGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCctct                                                                                                             <  1:182420/140‑1 (MQ=255)
                       cGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCctct                                                                                                             <  1:1428858/140‑1 (MQ=255)
                       cGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCctct                                                                                                             <  1:1258302/140‑1 (MQ=255)
                       cGATTCCCATTATTTCAAAAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCctct                                                                                                             <  2:730426/140‑1 (MQ=255)
                        gATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCtctc                                                                                                            <  1:1923436/140‑1 (MQ=255)
                        gATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCtctc                                                                                                            <  1:940888/140‑1 (MQ=255)
                        gATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCACATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCtctc                                                                                                            <  1:4329043/140‑1 (MQ=255)
                          ttCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCgg                                                                                                          <  1:2735113/140‑1 (MQ=255)
                          ttCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCgg                                                                                                          <  1:3992610/140‑1 (MQ=255)
                             ccATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCat                                                                                                       >  2:959046/1‑140 (MQ=255)
                             ccATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCat                                                                                                       >  2:2951600/1‑140 (MQ=255)
                             ccATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCat                                                                                                       >  1:515676/1‑140 (MQ=255)
                             ccATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCat                                                                                                       >  1:1700494/1‑140 (MQ=255)
                                    ttCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCtctc                                                                                                            >  1:3252180/1‑128 (MQ=255)
                                    ttCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCtctc                                                                                                            <  2:830734/128‑1 (MQ=255)
                                    ttCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCtctc                                                                                                            <  2:3252180/128‑1 (MQ=255)
                                    ttCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGt                                                                                                >  1:2992600/1‑140 (MQ=255)
                                        acaaATTACATTAAAGTAGGCCAAATCAGAAGCGTCAGCGTCGCATCTGGCTTTTGCACTGAATGCCGGATGTGGCGTAAACGCCTTATCGGTGCTAGGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGc                                                                                            >  1:3103864/1‑140 (MQ=255)
                                          aaaTTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGt                                                                                          <  1:908753/140‑1 (MQ=255)
                                          aaaTTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGt                                                                                          <  1:3207712/140‑1 (MQ=255)
                                          aaaTTACATTAAAGTAGGACAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGACTTCCTGACCCTCTCGGCATATAACGTCAGCGt                                                                                          <  2:70292/140‑1 (MQ=255)
                                             ttACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTg                                                                                       >  1:1253108/1‑140 (MQ=255)
                                             ttACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTg                                                                                       <  2:1725004/140‑1 (MQ=255)
                                                   tAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTAt                                                                                 <  1:1760804/140‑1 (MQ=255)
                                                   tAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTAt                                                                                 <  2:4481134/140‑1 (MQ=255)
                                                     aaGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATca                                                                               <  1:3586430/140‑1 (MQ=255)
                                                         aGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATc                                                                           <  1:607327/140‑1 (MQ=255)
                                                          ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGTCCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATcc                                                                          <  2:2244815/140‑1 (MQ=255)
                                                          ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATcc                                                                          >  1:4942979/1‑140 (MQ=255)
                                                          ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATcc                                                                          >  1:1153442/1‑140 (MQ=255)
                                                           gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCctct                                                                                                             <  2:5052582/104‑1 (MQ=255)
                                                           gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCctct                                                                                                             >  1:5052582/1‑104 (MQ=255)
                                                           gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCa                                                                         >  2:952805/1‑140 (MQ=255)
                                                           gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCa                                                                         >  2:109824/1‑140 (MQ=255)
                                                           gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCa                                                                         >  1:3464612/1‑140 (MQ=255)
                                                           gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCa                                                                         >  1:4452738/1‑140 (MQ=255)
                                                           gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCa                                                                         >  1:472448/1‑140 (MQ=255)
                                                               gATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGt                                                                     >  1:1095565/1‑140 (MQ=255)
                                                               gATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCGCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGt                                                                     >  2:4341748/1‑140 (MQ=255)
                                                                aTAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGtt                                                                    >  2:4974359/1‑140 (MQ=255)
                                                                aTAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGtt                                                                    >  2:3038561/1‑140 (MQ=255)
                                                                aTAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGtt                                                                    >  1:4280376/1‑140 (MQ=255)
                                                                aTAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGtt                                                                    >  1:5120182/1‑140 (MQ=255)
                                                                aTAAGACGCGTCAGCGTCGCATCTGGCACTTGCACTGAATCCCTGATGCCGCGTAACCACCTTACCCGTCCTACGACTCCCGCCACTTCCTCACCCCCCCGGCACATAACGTCAGCGCCTCTCTTATCACATCCCGCGtt                                                                    >  2:3828378/1‑140 (MQ=255)
                                                                 tAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTa                                                                   <  2:1184647/140‑1 (MQ=255)
                                                                    gACGCGTCAGCGCAGCATTTGGCATTTGAACTGAATGCCGGATGCGGCGTAAACGCTTTATCCGTCCCACGAATCCCGCGATTTCTTGACCCTCTCGTCATAGAACGTCAGCGCCTGTGTTATCACATCCTGCGTAACCg                                                                >  2:404072/1‑140 (MQ=25)
                                                                     aCGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCgg                                                               <  1:3801616/140‑1 (MQ=255)
                                                                     aCGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCgg                                                               >  1:216348/1‑140 (MQ=255)
                                                                         gTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTc                                                           >  1:4916769/1‑140 (MQ=255)
                                                                            aGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCgcc                                                        <  1:4163962/140‑3 (MQ=255)
                                                                             gCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACa                                                       <  1:850230/140‑1 (MQ=255)
                                                                              cGTCGCATTTGGCATTTGCACTGAAGGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGATTCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGGGTGTTTGATCACATCCAGCGTTACAGGCTTCGACAg                                                      >  2:2400088/1‑140 (MQ=37)
                                                                              cGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAg                                                      >  1:977525/1‑140 (MQ=255)
                                                                               gTCGCATCTGGCATTTTCACTGAATCCCCGATGCGGCGTAAACGCCTTATCCGTCCTACCAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAgg                                                     <  2:596323/140‑1 (MQ=39)
                                                                               gTCGCATCTGGCATTTGCACTGAATGCCGGATGGGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAgg                                                     <  2:2156626/140‑1 (MQ=255)
                                                                               gTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAgg                                                     <  2:899797/140‑1 (MQ=255)
                                                                               gTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAgg                                                     <  1:2236104/140‑1 (MQ=255)
                                                                                  gCATCTGGCATTTGCACTGAATGCCGGATGCGGCGCAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAg                                                  <  2:3541916/140‑1 (MQ=255)
                                                                                   cATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGc                                                 <  1:3740313/140‑1 (MQ=255)
                                                                                          cATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCAt                                          >  2:74701/1‑140 (MQ=255)
                                                                                           aTTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATa                                         <  2:4119719/140‑1 (MQ=255)
                                                                                             ttGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATAcc                                       <  1:2572997/140‑1 (MQ=255)
                                                                                             ttGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATAcc                                       <  2:2625021/140‑1 (MQ=255)
                                                                                              tGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCg                                      >  2:231589/1‑140 (MQ=255)
                                                                                                  cTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACt                                  <  1:2339317/140‑1 (MQ=255)
                                                                                                   tGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTc                                 >  1:1075199/1‑140 (MQ=255)
                                                                                                   tGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTc                                 >  2:2901093/1‑140 (MQ=255)
                                                                                                        gCCCGATGCGGCGCAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGCCCCTCTCGCCATATAACGTCAGCGTCTGTTTTCTCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGTTCCCCAGac                            >  2:1472249/1‑140 (MQ=255)
                                                                                                          cGGATGCAGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGacac                          <  1:1643103/140‑1 (MQ=255)
                                                                                                             aTGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGCCCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgc                       <  1:580454/140‑1 (MQ=255)
                                                                                                             aTGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgc                       <  2:125345/140‑1 (MQ=255)
                                                                                                             aTGCGGCGTAAACACCTTATCCGTCCTACGAATCCCGCGACTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgc                       <  2:3965422/140‑1 (MQ=255)
                                                                                                               gcggcgTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgctg                     >  1:1929828/1‑140 (MQ=255)
                                                                                                               gcggcgTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgctg                     >  2:4364962/1‑140 (MQ=255)
                                                                                                               gcggcgTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgctg                     >  1:3038485/1‑140 (MQ=255)
                                                                                                               gcggcgTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTAGCACATCCAGCGTTACCGGCTTCGACAGGCAGCGGGCCATACCCGACTCCAGACACCgctg                     >  2:4709808/1‑140 (MQ=255)
                                                                                                                 ggcgTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgctgct                   >  1:781855/1‑140 (MQ=255)
                                                                                                                 ggcgTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgctgct                   <  1:3728464/140‑1 (MQ=255)
                                                                                                                       aaCGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCtt             <  1:4543184/140‑1 (MQ=255)
                                                                                                                           ccTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGc         <  2:3454851/140‑1 (MQ=255)
                                                                                                                            cTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGcc        <  1:2406376/140‑1 (MQ=255)
                                                                                                                            cTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGcc        <  2:1931755/140‑1 (MQ=255)
                                                                                                                             ttATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGccc       >  2:2449159/1‑139 (MQ=255)
                                                                                                                              tATCCGTCCTACGAATCCCGCGCTTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCaa      <  2:311708/140‑1 (MQ=255)
                                                                                                                              tATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCaa      <  1:756368/140‑1 (MQ=255)
                                                                                                                                  cGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCa  <  2:3212340/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                       
GCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCTTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCA  >  NZ_CP025268/2320928‑2321197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑