BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	2,710,506	T→C	S215G (AGC→GGC)	lepA ←	translation elongation factor 4

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	2,710,506	0	T	C	100.0%	1073.6 / NA	320	S215G (AGC→GGC)	lepA	translation elongation factor 4
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (178/142); total (178/142)

Only 100 of 320 total aligned reads displayed.

CATACGAGCCAGCCTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCTGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTG  >  NZ_CP025268/2710370‑2710641

  tACGAGCCAGCCTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGtttt                                                                                                                                    <  1:1429973/140‑1 (MQ=255)

      agccaggcTGCTTCGCCACATTTCAGTTCATTGCGGTCCCCCTGTTTCGGCGTGACGATGCCCAGACGGTCGGCGTCATAGGTCTGCCCTGTACTCATGCCTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAAt                                                                                                                                <  2:1695264/140‑1 (MQ=255)

       gccagccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTTAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATa                                                                                                                               <  1:1238979/140‑1 (MQ=255)

       gccagccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATa                                                                                                                               <  2:2210632/140‑1 (MQ=255)

           gccTACTTCGCCACATTTTAGTTAAGTGCGGTCAACCTTGTTCGGCGTGAAGATGCCCAGCCGGGCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCAGTTGGTGGCGCTGATGCAGGGGGCCGTGTTTAGTATggg                                                                                                                           >  2:552945/1‑139 (MQ=255)

           gccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTTTTTCGGCGTTAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTGATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGa                                                                                                                           >  2:1198991/1‑140 (MQ=255)

           gccTACTTCGCCACATTTCAGGTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACGTGCACTTTGTCGCCCTTACGCAGGGTGCCGGTTTTAAGACGGa                                                                                                                           >  1:1182891/1‑140 (MQ=255)

            ccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGAt                                                                                                                          <  1:795637/140‑1 (MQ=255)

            ccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGAt                                                                                                                          <  2:906579/140‑1 (MQ=255)

            ccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGAt                                                                                                                          <  2:3841295/140‑1 (MQ=255)

            ccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGAt                                                                                                                          >  1:4293549/1‑140 (MQ=255)

            ccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGAt                                                                                                                          <  1:1677601/140‑1 (MQ=255)

            ccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTGTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGAt                                                                                                                          <  2:4746476/140‑1 (MQ=255)

                 ttCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTg                                                                                                                     >  2:459458/1‑140 (MQ=255)

                     ccACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaac                                                                                                                 <  2:765037/140‑1 (MQ=255)

                     ccACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaac                                                                                                                 <  1:4628947/140‑1 (MQ=255)

                     ccACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaac                                                                                                                 <  1:2812057/140‑1 (MQ=255)

                     ccACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaac                                                                                                                 >  2:536481/1‑140 (MQ=255)

                     ccACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGGTTTTAATACGGATAAGTGAaac                                                                                                                 >  1:2635207/1‑140 (MQ=255)

                      cacaTTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaaca                                                                                                                <  1:3506163/140‑1 (MQ=255)

                      cacaTTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaaca                                                                                                                >  2:4054578/1‑140 (MQ=255)

                       acaTTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaacaa                                                                                                               <  1:3086462/140‑1 (MQ=255)

                         aTTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACg                                                                                                             <  2:1412970/140‑1 (MQ=255)

                           ttcagttcagTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGcc                                                                                                           <  2:3022642/140‑1 (MQ=255)

                           ttcagttcagTGAGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGACACAACGcc                                                                                                           <  2:3672666/140‑1 (MQ=255)

                                ttcagtGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGt                                                                                                      <  2:1094524/140‑1 (MQ=255)

                                     tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGTCGTTATAGGTCTGCCCGGTACTCATGACTTTCCCTTTTTCGCCCTTCCGCCGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  1:1600166/1‑140 (MQ=255)

                                     tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCTTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  1:3946615/1‑140 (MQ=255)

                                     tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCGTGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  1:4120435/1‑140 (MQ=255)

                                     tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCGCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCTCAGGTAGTTg                                                                                                 >  2:4280206/1‑140 (MQ=255)

                                     tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGcc                                                                                                           >  1:872854/1‑130 (MQ=255)

                                     tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  2:3585762/1‑140 (MQ=255)

                                     tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  2:2802355/1‑140 (MQ=255)

                                     tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  2:2408704/1‑140 (MQ=255)

                                     tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACGCATGACTTTCACGTTAGCGCCCGTACGCAGGGTGCCGTTCTTAATACGGATAAGTGAAACAACTCTCAGGTAGTTg                                                                                                 >  2:1888963/1‑140 (MQ=255)

                                      gCGGTCAACCTGTTTCGGCGTGAAGAGGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGt                                                                                                <  1:1125865/140‑1 (MQ=255)

                                          tCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGaa                                                                                            >  1:4375396/1‑140 (MQ=255)

                                          tCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGaa                                                                                            >  1:3432963/1‑140 (MQ=255)

                                              ccTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCAt                                                                                        <  1:1749823/140‑1 (MQ=255)

                                                 ttttCGGCGTGCATAATCCCAAACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAg                                                                                     <  2:4473204/139‑1 (MQ=255)

                                                 gTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAg                                                                                     <  1:925411/140‑1 (MQ=255)

                                                 gTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAg                                                                                     <  1:3011225/140‑1 (MQ=255)

                                                     cggcggGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGa                                                                                 <  2:4558135/140‑1 (MQ=255)

                                                     cGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGa                                                                                 <  2:1336063/140‑1 (MQ=255)

                                                     cGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGa                                                                                 <  1:3687780/140‑1 (MQ=255)

                                                                 gCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCt                                                                     >  1:4086605/1‑140 (MQ=255)

                                                                      gACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAAc                                                                >  1:1923988/1‑140 (MQ=255)

                                                                      gACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAAc                                                                <  1:4850605/140‑1 (MQ=255)

                                                                           tCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGcc                                                           >  1:5140077/1‑140 (MQ=255)

                                                                           tCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGcc                                                           >  1:2666837/1‑140 (MQ=255)

                                                                                   atatGTCCGCCCCGTAATCATGGCTTTCACTTTGGCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACCACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGAt                                                   <  1:151222/140‑1 (MQ=255)

                                                                                         cTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCtt                                             >  1:2064258/1‑140 (MQ=255)

                                                                                         cTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCtt                                             >  1:3733435/1‑140 (MQ=255)

                                                                                         cTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTGTAATACGGATAAGTGAAACAACGCCCCGGTAGTTGTCGAACCATGAGTCGATCATTAGTGCCTCCAACGGGCCTTCCGTAGCGCGtt                                             >  2:4018541/1‑140 (MQ=255)

                                                                                          tGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTGTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGGCGAACCATGAGTCGAGAATTAGTGCCTGCAACGGGGCTTCCGGATCGCCTTc                                            >  2:1659036/1‑140 (MQ=255)

                                                                                           gCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCATTCCGGATCGCCTTcc                                           >  1:4231856/1‑140 (MQ=255)

                                                                                           gCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGGGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCCTGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTcc                                           >  1:381323/1‑140 (MQ=255)

                                                                                            cccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcg                                          >  2:3997613/1‑140 (MQ=255)

                                                                                            cccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcg                                          >  2:1768325/1‑140 (MQ=255)

                                                                                            cccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcg                                          >  1:2430261/1‑140 (MQ=255)

                                                                                             ccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcgg                                         <  1:2016216/140‑1 (MQ=255)

                                                                                             ccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcgg                                         <  1:686082/140‑1 (MQ=255)

                                                                                                 tACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcggcggc                                     >  2:1181313/1‑140 (MQ=255)

                                                                                                 tACTCATGACTTTCACTTTGACGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcggcggc                                     >  2:859346/1‑140 (MQ=255)

                                                                                                      aTGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGcc                                                                                                           <  2:2113012/65‑1 (MQ=255)

                                                                                                      aTGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAAt                                >  2:3742478/1‑140 (MQ=255)

                                                                                                          cTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcg                            <  2:4824290/140‑1 (MQ=255)

                                                                                                          cTTTCACTTCGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcg                            <  2:3886188/140‑1 (MQ=255)

                                                                                                           tttCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcgc                           >  2:5117003/1‑140 (MQ=255)

                                                                                                           tttCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcgc                           >  2:4124899/1‑140 (MQ=255)

                                                                                                           tttCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcgc                           >  1:2908108/1‑140 (MQ=255)

                                                                                                             tCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCgcgc                         >  1:61777/1‑140 (MQ=255)

                                                                                                              cACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCa                        >  1:940465/1‑140 (MQ=255)

                                                                                                              cACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCa                        >  2:3282271/1‑140 (MQ=255)

                                                                                                                cTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCAcc                      >  2:3918327/1‑140 (MQ=255)

                                                                                                                cTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCAcc                      <  1:467767/140‑1 (MQ=255)

                                                                                                                  ttGTCGCCCTTACGCAGGGTGCCGTTTTTAATCCGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAg                    >  1:2212258/1‑140 (MQ=255)

                                                                                                                  ttGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACGAg                    >  1:4319890/1‑140 (MQ=255)

                                                                                                                  ttGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAg                    <  1:560206/140‑1 (MQ=255)

                                                                                                                   tGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTGGCGCACCCGa                   >  2:4957484/1‑140 (MQ=255)

                                                                                                                    gTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGAc                  >  1:5097403/1‑140 (MQ=255)

                                                                                                                     tCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACg                 >  1:4526906/1‑140 (MQ=255)

                                                                                                                       gCCCTTACGCAGGGTGCCGTTTTTACTACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGtt               <  2:4183657/140‑1 (MQ=255)

                                                                                                                       gCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGtt               <  1:2339347/140‑1 (MQ=255)

                                                                                                                       gCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGtt               <  2:3491878/140‑1 (MQ=255)

                                                                                                                        cccTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTc              >  2:2568097/1‑140 (MQ=255)

                                                                                                                            tACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCgaga          <  1:1220414/140‑1 (MQ=255)

                                                                                                                            tACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCgaga          <  1:2103752/140‑1 (MQ=255)

                                                                                                                            tACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCgaga          <  2:2329670/140‑1 (MQ=255)

                                                                                                                            tACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCgaga          <  1:4654949/140‑1 (MQ=255)

                                                                                                                            tACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCgaga          <  2:2637769/140‑1 (MQ=255)

                                                                                                                            tACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTACGGCGGCGGAATGTCGCGCACCAGACGTTCgaga          <  1:3625755/140‑1 (MQ=255)

                                                                                                                            tACGCAGGGTGCCGTTTTAAAGACGGATAAGTGAAACAACCCCCAGGTAGTTGTCGAACCATGAGTCCATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTAgaga          <  1:3238166/140‑1 (MQ=255)

                                                                                                                               gCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACg       <  1:3585762/140‑1 (MQ=255)

                                                                                                                               gCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACg       <  2:2714613/140‑1 (MQ=255)

                                                                                                                                 aGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTc     <  1:893107/140‑1 (MQ=255)

                                                                                                                                   ggTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCt   >  1:419075/1‑140 (MQ=255)

                                                                                                                                    gTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTg  <  2:5171281/140‑1 (MQ=255)

                                                                                                                                    gTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTg  <  1:1038712/140‑1 (MQ=255)

                                                                                                                                    gTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCACGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTg  <  1:2550567/140‑1 (MQ=255)

CATACGAGCCAGCCTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCTGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTG  >  NZ_CP025268/2710370‑2710641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`