| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,800,937 | C→T | C38Y (TGT→TAT) | yqaE ← | YqaE/Pmp3 family membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,800,937 | 0 | C | T | 99.2% | 883.6 / NA | 238 | C38Y (TGT→TAT) | yqaE | YqaE/Pmp3 family membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (60/175); total (61/177) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 239 total aligned reads displayed.
AGACCCATAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATACACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTACTCCCTATAAGAAAATT > NZ_CP025268/2800800‑2801071 | gACCCATAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATAcc < 1:4158947/140‑1 (MQ=255) aCCCATAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATAccc > 2:1365194/1‑140 (MQ=255) aCCCATAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATAccc > 1:3558459/1‑140 (MQ=255) aCCCATAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGGTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATAccc > 1:1069289/1‑140 (MQ=255) ccATAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCaa < 1:663032/140‑1 (MQ=255) ccATAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCaa < 2:2171394/140‑1 (MQ=255) aTAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc < 2:1010624/140‑1 (MQ=255) aTAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc < 1:5114139/140‑1 (MQ=255) aTAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc < 1:5017529/140‑1 (MQ=255) aTAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc < 1:4690162/140‑1 (MQ=255) aTAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc < 1:2105894/140‑1 (MQ=255) aTAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc < 2:4787657/140‑1 (MQ=255) aTAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc < 1:2266806/140‑1 (MQ=255) aTAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc < 1:2827079/140‑1 (MQ=255) aTAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc < 1:2704294/140‑1 (MQ=255) tAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCa < 1:1439827/140‑1 (MQ=255) tACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAgtgt < 1:3175247/140‑1 (MQ=255) aCCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTc > 1:943897/1‑140 (MQ=255) aCCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTc > 2:3527203/1‑140 (MQ=255) aCCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGAGATACCCAAGCAGTGTc > 1:2885190/1‑140 (MQ=255) cTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCaa < 1:702488/140‑1 (MQ=255) cTCATGCGTTAACGGAAACACTCAGAGTGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGGGAATCAAACC‑GGGGATATACCCAAGCAGTGTCaa < 2:3226242/140‑1 (MQ=255) aTTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAg < 1:714405/140‑1 (MQ=255) aTTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAg < 1:1761003/140‑1 (MQ=255) aTTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAg < 1:3729444/140‑1 (MQ=255) aTTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGACGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAg < 2:2983962/140‑1 (MQ=255) ttCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGa > 1:2469264/1‑140 (MQ=255) ttCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGa > 2:3277605/1‑140 (MQ=255) ttCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGa > 2:3727874/1‑140 (MQ=255) tCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTAAACAGaa < 1:3808416/140‑1 (MQ=255) aaaCACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTaataat < 1:4855669/140‑1 (MQ=255) acacTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGa > 1:1833690/1‑140 (MQ=255) cTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACg < 1:4944069/140‑1 (MQ=255) cAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGcc < 1:4489342/140‑1 (MQ=255) aaaGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCaa > 2:3783190/1‑140 (MQ=255) aGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAAcc < 2:3562838/140‑1 (MQ=255) aGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAAcc < 2:4487474/140‑1 (MQ=255) gtgtAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCg < 1:3297134/140‑1 (MQ=255) gtgtAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCg < 2:224527/140‑1 (MQ=255) tgtAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGa < 2:192492/140‑1 (MQ=255) tAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAAc > 1:4447194/1‑140 (MQ=255) aGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAAcc < 2:1617464/140‑1 (MQ=255) gAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGc > 2:3849327/1‑93 (MQ=255) gAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAAcc > 1:1515944/1‑133 (MQ=255) gAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAAcc < 2:1515944/133‑1 (MQ=255) aCGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGa > 2:2080618/1‑140 (MQ=255) cgcgGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCaa < 2:4738806/98‑1 (MQ=255) cggcgCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGagca > 2:3126583/1‑140 (MQ=255) cggcgCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGagca < 2:721020/140‑1 (MQ=255) cgcgATAACGCCGCGGGGATGCGCACAGCTCTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCCAGCAGTGTCAACAGAATATTAATAATGCACGCCCAACCGAACCCTTTACCGAgcagca < 2:2433787/140‑1 (MQ=255) tAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGGGCAGCACGCCg < 2:80356/140‑1 (MQ=255) cgGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGcggcgg < 1:3477308/140‑1 (MQ=255) ggATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAg < 2:1169908/140‑1 (MQ=255) caGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGt < 1:1247658/140‑1 (MQ=255) aaGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGAGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGt < 1:4598096/139‑1 (MQ=255) ttAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGtgatga < 1:655393/140‑1 (MQ=255) aTCGCGGGTTTGCACCCAGAACGTGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGa < 1:4766238/140‑1 (MQ=255) aTCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGa > 2:4015157/1‑140 (MQ=255) aTCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGa < 1:600550/140‑1 (MQ=255) aTCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGa < 2:702945/140‑1 (MQ=255) cgcgGGTTTGCACCCAGAACGCGTGAATCAAGCC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGAtt < 2:62555/140‑1 (MQ=255) cgcgGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGAtt < 2:2274649/140‑1 (MQ=255) cgcgGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGAtt < 2:4653281/140‑1 (MQ=255) cgcgGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGAtt < 2:4930851/140‑1 (MQ=255) gggTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATtctc > 1:1477929/1‑140 (MQ=255) tttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAg < 2:418792/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 1:1300444/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 1:760481/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 2:1396176/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 2:1474706/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 2:518724/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 2:1477929/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 2:1690696/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 2:2469264/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 1:4533177/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 2:2064981/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 2:2149211/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 1:4620637/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGACAGAATGATGGTGATGACGATTCTCCAGa < 2:4354112/140‑1 (MQ=255) ttGCACCCAGAACGCGTGAATCAAACC‑GGGGATACACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGa < 1:2204976/140‑1 (MQ=255) tGCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGaa > 1:1332839/1‑140 (MQ=255) gCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGaaa < 2:580797/140‑1 (MQ=255) gCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGaaa < 1:378290/140‑1 (MQ=255) gCACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGaaa < 1:3341814/140‑1 (MQ=255) gCACCCAGAACGCGTGAATAAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGaaa < 2:1704908/140‑1 (MQ=255) ccACCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCGTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGaaa < 2:2675238/139‑1 (MQ=255) cACCCAGAACGCGTGAATCAAACCGGGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGaaa < 2:1018178/140‑1 (MQ=255) aCCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAAcc < 1:4256209/140‑1 (MQ=255) aCCCAGAACGCGTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAAcc < 2:2127325/140‑1 (MQ=255) cgcgTGACTCACACC‑GGGGATATACCTAAGCATTGTACACAGAATACTAATAATGACCGCCCAACCGAACCTTTTACCGAGTAACACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTa < 2:2583731/140‑1 (MQ=255) cgcgTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTa < 2:773274/140‑1 (MQ=255) cgcgTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTa < 2:1090917/140‑1 (MQ=255) cgTGAATCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTACt < 1:1947420/140‑1 (MQ=255) tCAAACC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTACTCCCtat < 1:1386401/140‑1 (MQ=255) aaaCC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTACTCCCTATaa < 1:3228209/140‑1 (MQ=255) aaaCC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTACTCCCTATaa < 2:2719070/140‑1 (MQ=255) aaCC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCa > 1:2361357/1‑123 (MQ=255) aCC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAAccc < 2:4405983/121‑1 (MQ=255) aCC‑GGGGATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAAccc > 1:4405983/1‑121 (MQ=255) ggATATACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTACTCCCTATAAGAAAAtt > 1:3043411/1‑140 (MQ=255) | AGACCCATAGCTACCTCATTCGTTAACGGAAACACTCAGAAAGTGTAGCAGAGGAACGCGGCGCGTTAACGCCGCGGGGATGAGCACAGGTTTAATCGCGGGTTTGCACCCAGAACGCGTGAATCAAACC‑GGGGATACACCCAAGCAGTGTCAACAGAATATTAATAATGAACGCCCAACCGAACCCTTTACCGAGCAGCACGCCGAGCGGCGGCAGAATGATGGTGATGACGATTCTCCAGAAACCCATATGTACTCCCTATAAGAAAATT > NZ_CP025268/2800800‑2801071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |