| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,986,326 | C→T | C35Y (TGC→TAC) | kduI ← | 5‑dehydro‑4‑deoxy‑D‑glucuronate isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,986,326 | 0 | C | T | 99.3% | 1006.1 / NA | 272 | C35Y (TGC→TAC) | kduI | 5‑dehydro‑4‑deoxy‑D‑glucuronate isomerase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (77/192); minor base A (0/2); total (77/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 272 total aligned reads displayed.
AACACCTAACTCGCGACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGCACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAA > NZ_CP025268/2986190‑2986461 | aaCACCTAACTCGCGACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCTGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACt > 1:2662768/1‑140 (MQ=255) acCTAACTCGCGACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCAGGGTGTACTCAt > 1:1866033/1‑140 (MQ=255) cTAACTCGCGACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCg < 1:1126703/140‑1 (MQ=255) cTAACTCGCGACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCg > 1:2364158/1‑140 (MQ=255) aaCTCGCGACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGc > 1:392158/1‑140 (MQ=255) aCTCGCGACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCg > 1:2795968/1‑140 (MQ=255) aCTCGCGACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCg > 2:708656/1‑140 (MQ=255) cgACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACaaa > 2:1884408/1‑140 (MQ=255) cgACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACaaa > 1:2193330/1‑140 (MQ=255) aCGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATa > 1:1446691/1‑140 (MQ=255) tAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGTTGTACTCATCGGCGACAAATACCTTTTCAACCaa > 1:1679736/1‑140 (MQ=255) aGTTGTTTACCGACGTCTACGCCAACGGAAACCGTTTTAGTTAGCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAGCCATGGTGTACTCATCGGCGACAAATTCCTTTTCAACCACAAATTCATTgcg < 2:43355/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg > 2:5171598/1‑140 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 1:4355015/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 1:4595224/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 1:4846297/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 1:60257/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg > 1:1573649/1‑140 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 1:825075/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 1:2714768/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 1:2577146/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 2:4646060/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 2:2492373/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg > 2:2551462/1‑140 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 1:1896940/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCAAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 1:4331496/140‑1 (MQ=255) aGTTGTTTACCAACTTCCCCGACAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcg < 2:1692073/140‑1 (MQ=255) aGTTGTTTACCAACGTCCCCGCCAACGGAACCCGTTTTAGTTATCGGCATAATGCCGCCAACCATAATTCGTTCAATGTGGCTGTAAACCATTCTGGACTCATCTGACACAAGTTCCTTTTCAACCAAAAATTAATTtcg < 2:4756148/140‑1 (MQ=255) aGTTGTATACCCAATTCCCCGCCAACGGAAACCGTTTTCGTTATCGGCATAATGCCGCCAACAATCATTCGGTCACTGTGGCTGTAAACCCTTGTGTACTCATCGGCGACAAATCCCTTTTCAACCAAAAATTCATTgcg < 2:2045654/140‑1 (MQ=255) gttgttTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTgcgc < 2:876466/140‑1 (MQ=255) tttACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGcc < 1:3250020/140‑1 (MQ=255) cAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTgg < 2:4456392/140‑1 (MQ=255) cAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTgg > 2:3614978/1‑140 (MQ=255) cAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTgg > 2:3131823/1‑140 (MQ=255) aCTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTACACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGt > 1:864568/1‑140 (MQ=255) tCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATc > 1:2107664/1‑140 (MQ=255) cccGCCAACGGAATCCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCa < 1:3643515/140‑1 (MQ=255) cccGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCa < 2:4769765/140‑1 (MQ=255) cAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGtt < 1:2558027/140‑1 (MQ=255) aCGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGtttt < 1:1689511/140‑1 (MQ=255) aCGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCAGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGtttt > 1:2888847/1‑140 (MQ=255) aCCGTTTTAGTTATCGGCATAATGCCGCCACCAATAATTCGGTCAATGTGGCTGTACACCATGGTTTACTCATCGGCGCCAAATACCTTTTCCACCAACCATTCATTCCGCAGCCCTTGGGTATCCAGCGTTTTtgcgtg < 2:3899738/140‑1 (MQ=255) aCCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTtgcgtg < 1:2921886/140‑1 (MQ=255) cGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTtgcgtgcg < 1:2483883/140‑1 (MQ=255) cGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTtgcgtgcg < 1:350148/140‑1 (MQ=255) cGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTtgcgtgcg < 2:589506/140‑1 (MQ=255) cGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTtgcgtgcg < 1:3933209/140‑1 (MQ=255) cGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTtgcgtgcg < 2:3016247/140‑1 (MQ=255) gTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTgcgc < 1:650797/140‑1 (MQ=255) gTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTgcgc < 1:2771107/140‑1 (MQ=255) gTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTgcgc < 2:1569517/140‑1 (MQ=255) ttttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCa < 1:510781/140‑1 (MQ=255) tttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCAc < 2:2722945/140‑1 (MQ=255) tttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCAc < 1:4044460/140‑1 (MQ=255) tttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCAGGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCAc < 1:3708072/140‑1 (MQ=255) tttAGTTATCGGCATAATGCCGCAAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCAc < 1:4960383/140‑1 (MQ=255) ttAGTTATCGGCATAATGCCTGCTACAATAATTCGGTCAATGTGGCTGTAAACCATGGTTTACTCATCGGCGACATATACCTTTTCAACCAAAATTTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACt < 2:3718194/140‑1 (MQ=255) ttATCGGTATAACGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCTACAAATACCTTTTCAACTAAAAATTCATTGCGCAGCCCTTGGGTATCCAGAGTTTTTGCGTGTGCACTGTgg < 2:2197676/140‑1 (MQ=255) ttATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTgg < 1:1995345/140‑1 (MQ=255) aTCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGAt > 1:4700652/1‑140 (MQ=255) aTCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGAt < 2:1742458/140‑1 (MQ=255) aTCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCGTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGAt > 2:4531255/1‑140 (MQ=255) cGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACAATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGc < 1:3184661/140‑1 (MQ=255) gtcacaaTGCCGCCAGCAATAATTCAGTCAATCTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAACTTCCTGGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGct < 2:1228274/135‑1 (MQ=255) ggCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGct < 1:462987/140‑1 (MQ=255) ggCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGct < 1:944562/140‑1 (MQ=255) ggCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGct < 2:1833413/140‑1 (MQ=255) ggCATAATGCCGCCAACAATAATTCGGTCAATGTAGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGct < 2:291024/140‑1 (MQ=255) cgCATCATGCCGCCAACAATAATTCGGTCAATGTGGCTGTACACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGcg < 2:34575/139‑2 (MQ=255) gcactctGCCGCCAACAATCATTCGGTCAATGTGGCTGTGACGCATGGGGTACTCAGCGGCGACAAAGACCTTTTCAACCATAAAGTCAGTGCGCTGCCCTTGGGGCTCCAGCGTGTTTGCGTGCGCACTGTGGATGctc < 2:4432375/134‑1 (MQ=255) gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGctc < 2:1923438/140‑1 (MQ=255) gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGctc < 1:1849071/140‑1 (MQ=255) gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGctc < 2:399516/140‑1 (MQ=255) gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGctc < 1:1292840/140‑1 (MQ=255) gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGctc < 1:512321/140‑1 (MQ=255) gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGctc < 2:1483177/140‑1 (MQ=255) gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCCCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGctc < 2:505066/140‑1 (MQ=255) tAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGt < 2:1446691/140‑1 (MQ=255) aaTGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTc > 2:2839998/1‑140 (MQ=255) aaTGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTc > 2:2564967/1‑140 (MQ=255) tGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCtt < 1:1397241/140‑1 (MQ=255) tGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCtt < 2:214452/140‑1 (MQ=255) ccacaaTAAGCCGGTCCATGTCGGTGTAAACCATGGTGTAGCCATCGGCGACAAATTCTTTTACAACCAAAAATTCATTGCGCAGCCCTTGGGTAGCCCGCGGTTTTGCGTGCGCACTGTGGATGCTCTGTCTCACGTcc < 2:3392020/138‑1 (MQ=255) caacaaTAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCACAAATTCATTGCGCTGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTcc < 2:3524122/140‑1 (MQ=255) caacaaTAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTcc < 2:1716816/140‑1 (MQ=255) taatTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCa < 1:3765826/140‑1 (MQ=255) atTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAAc < 1:738675/140‑1 (MQ=255) cGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTc < 1:2955978/140‑1 (MQ=255) ggTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTcc > 1:3041267/1‑140 (MQ=255) gTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAAGTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCg < 1:3813488/140‑1 (MQ=255) tCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGa > 1:1503110/1‑140 (MQ=255) tCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTGTCAACCAAAAATTCATTGCGCAGCCCTTGGGGATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCGGTTTTACGTCCACATCAACCTCCGa > 2:2885459/1‑140 (MQ=255) acaacctgGCTGTAAACCATGGTGTACCCATCGGCGACCAATACCTTGTCAACCAAAAACTCATGCCGCAGCCCTTGGCCACCCAGCCTTTTTCCGTGCGCACCGTCGACGCAACGCCTTCCGCCCACACCCACCTCCGa > 2:757770/7‑140 (MQ=255) cTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTg > 2:1937090/1‑140 (MQ=255) aaCCATGGTGTACTCATCGGCGACCAATACCTTTTCAACCAAAAAGTCATTGCGCACCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCAGATAATCAGCGAAGCg > 2:451603/1‑140 (MQ=255) aaCCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCg < 1:4101303/140‑1 (MQ=255) tGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTtgcgtgcg < 2:2403372/81‑1 (MQ=255) tGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTtgcgtgcg > 1:2403372/1‑81 (MQ=255) tGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACtg < 1:1048025/86‑1 (MQ=255) ggTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATGCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaaa < 1:4774375/140‑1 (MQ=255) | AACACCTAACTCGCGACGTTCAAGGAAATAGCTTACGCCGAGTTGTTTACCAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGCACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAA > NZ_CP025268/2986190‑2986461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |