| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,084,181 | C→T | intergenic (‑242/‑36) | tkt ← / → loiP | transketolase/metalloprotease LoiP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,084,181 | 0 | C | T | 99.5% | 1413.0 / NA | 381 | intergenic (‑242/‑36) | tkt/loiP | transketolase/metalloprotease LoiP |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (207/171); minor base G (2/0); total (210/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 381 total aligned reads displayed.
ATGTACATGGAACATCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTCTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAG > NZ_CP025268/3084047‑3084316 | tGTACATGGAACATCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGaa < 1:3995562/140‑1 (MQ=255) tGTACATGGAACATCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGaa < 1:1399287/140‑1 (MQ=255) tGTACATGGAACATCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGaa < 2:733645/140‑1 (MQ=255) gAACATCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTg > 1:2023510/1‑140 (MQ=255) cATCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGAcc > 1:1151883/1‑140 (MQ=255) cATCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGAcc < 1:1501842/140‑1 (MQ=255) cATCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACGCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGAcc < 1:3707529/140‑1 (MQ=255) aTCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCCTGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTTGAATAATCCTGACCt > 2:142003/1‑140 (MQ=255) aTCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCTATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATAGCGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATCAACCTGACCt > 2:3796703/1‑140 (MQ=255) aTCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCt > 1:1119759/1‑140 (MQ=255) ttttGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTCTACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTtgtg < 2:3172692/140‑1 (MQ=255) ttttGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTtgtg > 2:788845/1‑140 (MQ=255) cTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAagag > 2:1622791/1‑140 (MQ=255) ccgAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGATACTGAGCGTCGATGCACCTGCAAACGGCTCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGaaa < 2:3760510/138‑1 (MQ=255) tGGATCCTGCTCGCATTTTGCGCAATCTACTCGCCCATCTGCTGCGTTGTTACCTATTTTGAAACAGAGCGTCGTTTCACCAGCAGACGGCGCATATTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAAt > 2:5071107/1‑140 (MQ=255) tGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTGATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGCAAGATAAAAGATGatgct > 2:1542039/1‑136 (MQ=255) aTCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTcg < 1:640062/140‑1 (MQ=255) aTCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTcg < 2:4196244/140‑1 (MQ=255) tCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTcgc < 1:287230/140‑1 (MQ=255) cATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTcgcg < 2:2391162/140‑1 (MQ=255) cATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTcgcg < 1:2619125/140‑1 (MQ=255) tGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTTCGCTTTTCCTTATACTGCGACTGCGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGcc > 2:918054/1‑140 (MQ=255) tGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGcc > 1:4382757/1‑140 (MQ=255) tGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGcc > 1:2411133/1‑140 (MQ=255) tGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGGCGATTCACGTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGcc > 2:3453398/1‑140 (MQ=255) tGCTCGCATGTTGCGCAATCTACACGCCCGTCCGCTGCGCTTTTCCTTATATTGAGACTGAGCGTCGATTCACCTGCAACCGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACCTGAAAATTCGCGcc > 1:3116263/1‑140 (MQ=255) cGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTAt < 1:1269991/140‑1 (MQ=255) aTGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑gg < 1:1908436/140‑1 (MQ=255) ttGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAg < 2:3005507/140‑1 (MQ=255) gcgcAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCa < 1:2576702/140‑1 (MQ=255) cgcAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCaa > 1:4352023/1‑140 (MQ=255) aTCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAg < 2:2792180/140‑1 (MQ=255) tACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGt < 2:609026/140‑1 (MQ=255) tCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGc > 1:5080260/1‑140 (MQ=255) cGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAACTTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCa < 1:2766658/140‑1 (MQ=255) gCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCaa < 1:3475732/140‑1 (MQ=255) gCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCaa < 2:2702046/140‑1 (MQ=255) gCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAAGTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCaa < 2:424756/140‑1 (MQ=255) cGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACgg > 1:777165/1‑140 (MQ=255) cGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGGGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACgg > 2:4936081/1‑140 (MQ=255) cGTCCGCTGCGCTTTTCCTTATACTGAGAATGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACgg > 1:1830319/1‑140 (MQ=255) tCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTa > 2:1714408/1‑140 (MQ=255) tCCGCTGCGCTTTTCCGTATACTGAGACTGAGCGTCGATTCACCTGAAAACGGCGCATTTTTAGAATAGTCCTGACCCTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTa > 2:4592494/1‑140 (MQ=255) cGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTGTTAGAATAATCCTGACCGTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTacg > 1:2638995/1‑139 (MQ=255) cgcTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTactgactg > 1:1184836/1‑140 (MQ=255) tttCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTg > 1:4687403/1‑140 (MQ=255) tttCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTg < 1:1314619/140‑1 (MQ=255) tCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGcc < 1:898856/140‑1 (MQ=255) ataCTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAat < 1:4121153/140‑1 (MQ=255) taCTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGCCCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAata < 1:1011816/140‑1 (MQ=255) ctgagactgagCGTCGATTCACGTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTACT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATg < 2:4084902/140‑1 (MQ=255) ctgagactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATg < 1:1812063/140‑1 (MQ=255) ctgagactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTCTGCGGAAGAGAAAACATGCAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATg < 2:398605/140‑1 (MQ=255) tgagactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATgg > 2:4361738/1‑140 (MQ=255) agactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCTCCTTATTGGGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGa > 1:1735565/1‑140 (MQ=255) agactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGAc > 2:3104776/1‑140 (MQ=255) agactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGAc > 1:4876347/1‑140 (MQ=255) agactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGAc > 2:584507/1‑140 (MQ=255) agactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGAc > 1:1432920/1‑140 (MQ=255) agactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGAc > 2:1888337/1‑140 (MQ=255) agactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGAc > 2:2120939/1‑140 (MQ=255) gactgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAGTCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACt > 2:4748511/1‑140 (MQ=255) actgagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTc > 1:736160/1‑140 (MQ=255) gagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCaa > 1:974042/1‑140 (MQ=255) gagCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCaa > 2:5146807/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGTGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 2:2262087/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCTCGCCTTATT‑GGTAGCAATGAGCATGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 1:4757376/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCa < 2:4900704/138‑1 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 1:2965893/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 2:2888502/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 1:2109470/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 1:392336/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 2:3262070/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 2:3384613/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 1:498036/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 2:3858167/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAAc > 1:4218217/1‑140 (MQ=255) agCGTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATCCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCGAAc > 1:3532157/1‑140 (MQ=255) gTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGa < 1:229294/140‑1 (MQ=255) gTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGa < 1:1043024/140‑1 (MQ=255) gTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGa < 1:1622791/140‑1 (MQ=255) gTCGATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGa < 1:4034243/140‑1 (MQ=255) gATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTg < 1:3560988/140‑1 (MQ=255) ttCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGct < 2:1306493/140‑1 (MQ=255) ttCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGct < 1:22140/140‑1 (MQ=255) ttCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGAAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGct < 2:1776019/140‑1 (MQ=255) ttCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGAAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACTGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGct < 2:1494846/140‑1 (MQ=255) cACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGctct > 2:3233963/1‑140 (MQ=255) ccTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCtca > 2:2611362/1‑140 (MQ=255) tGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGCGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCtcatc < 1:5141042/140‑1 (MQ=255) cAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGACAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAg < 1:4562605/140‑1 (MQ=255) ggCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCg > 1:3277726/1‑140 (MQ=255) ggCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCg > 1:558446/1‑140 (MQ=255) cgcATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGATAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGACTATGGACTCCAACGGACTGCTCGCATCAGGAGCGGa > 2:4520505/1‑140 (MQ=255) cgcATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGa > 2:2666454/1‑140 (MQ=255) cgcATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAAGTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGa < 1:3066451/140‑1 (MQ=255) ggaTTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTTACTGGTTGCCAGAATATGGACTCCAACGGACTTCTCTCATCAGGAGCGGaa < 2:2051321/138‑1 (MQ=255) gcATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGaa < 1:3180342/140‑1 (MQ=255) gcATTTTTAGAAAAAGCCTGACCTTGTGCGGAAATGACAACATGGACATTCGCGCCTTATT‑GGTAGCAATGAGCGTGCCTCCCGTACTGACTGGTTGCCAGAATATGGACTCCACCGGACTGCTCTCATAAGCCGCGGaa < 2:390083/140‑1 (MQ=255) cATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAg < 2:664351/140‑1 (MQ=255) | ATGTACATGGAACATCCTTTTGCCGCTTCAGAAATCTCTGGATCATGCTCGCATGTTGCGCAATCTACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGATTCACCTGCAAACGGCGCATTCTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATT‑GGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAG > NZ_CP025268/3084047‑3084316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |