| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,170,103 | T→A | intergenic (‑81/+52) | ygiS ← / ← mqsA | ABC transporter substrate‑binding protein/type II toxin‑antitoxin system antitoxin MqsA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,170,103 | 0 | T | A | 98.3% | 1109.1 / 7.0 | 300 | intergenic (‑81/+52) | ygiS/mqsA | ABC transporter substrate‑binding protein/type II toxin‑antitoxin system antitoxin MqsA |
| Reads supporting (aligned to +/- strand): ref base T (4/1); new base A (197/98); total (201/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
Only 100 of 300 total aligned reads displayed.
TAGAGAGGAGCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCT > NZ_CP025268/3169967‑3170239 | tAGAGAGGAGCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGc > 1:1604336/1‑140 (MQ=255)tAGAGAGGAGCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGc > 1:3626613/1‑140 (MQ=255) ggaggagCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTca < 2:4261015/139‑1 (MQ=255) agagGAGCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTca < 2:3890599/140‑1 (MQ=255) aggagCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTcaca < 2:4378094/140‑1 (MQ=255) aggagCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTACACATGGTATTCTTCACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGCTTAGGCTcaca < 1:4310022/140‑1 (MQ=255) agCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTc > 2:1513644/1‑140 (MQ=255) agCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTc > 1:5184528/1‑140 (MQ=255) agCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTc > 2:517403/1‑140 (MQ=255) ccGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCg > 2:805532/1‑140 (MQ=255) ccGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACGTATCGCGAGTGATTAGGCTCACACTCCg > 1:4204360/1‑140 (MQ=255) cACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGGGATTAGGCTCACACTCCGGTa > 2:894846/1‑140 (MQ=255) aCCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGaa > 2:4168465/1‑140 (MQ=255) gCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAg > 1:4742544/1‑140 (MQ=255) gCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAg > 2:4542324/1‑140 (MQ=255) gACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGa > 2:4812737/1‑140 (MQ=255) gACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGa > 1:1916360/1‑140 (MQ=255) aCCCGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACGTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAg > 2:5039667/1‑140 (MQ=255) aCCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAg < 2:3802819/140‑1 (MQ=255) ccAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGt > 1:387462/1‑140 (MQ=255) ccAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGt > 1:2598422/1‑140 (MQ=255) ccAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGt > 1:3093606/1‑140 (MQ=255) cAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGtt > 2:529779/1‑140 (MQ=255) ccATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGcc > 2:4724528/1‑140 (MQ=255) ataaATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCTCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAGGAAAAAAGCGAGTTGCCCCCGc > 2:2869521/1‑140 (MQ=255) ataaATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGc > 1:4403619/1‑140 (MQ=255) ataaATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGc > 2:1270976/1‑140 (MQ=255) ataaATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGc > 1:1342079/1‑140 (MQ=255) tttCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTc > 2:4686861/1‑140 (MQ=255) ttCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTcc < 2:1655539/140‑1 (MQ=255) cgTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCatta > 1:5092001/1‑140 (MQ=255) tATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGAtt < 1:1705631/140‑1 (MQ=255) ttCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATttc > 2:4477970/1‑140 (MQ=255) tCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATttca < 1:4927010/140‑1 (MQ=255) tCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATttca < 2:2348661/140‑1 (MQ=255) cTTACCGGAGACATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCAGTAATTAACGGATttcatt > 2:3691683/1‑140 (MQ=255) tACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATttcattca > 1:5095052/1‑140 (MQ=255) aCCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCaa > 2:3411760/1‑140 (MQ=255) aCCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCaa > 2:1989559/1‑140 (MQ=255) aCCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCaa < 1:4717841/140‑1 (MQ=255) aCCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCaa > 1:3794078/1‑140 (MQ=255) aCCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCaa > 1:2259186/1‑140 (MQ=255) cGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATa > 2:3843348/1‑140 (MQ=255) cGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATa > 2:101933/1‑140 (MQ=255) cGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATa > 1:522636/1‑140 (MQ=255) gagaAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTCTCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGt > 1:3736761/1‑140 (MQ=255) gagaAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGt > 2:4744959/1‑140 (MQ=255) gagaAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGt > 2:2723988/1‑140 (MQ=255) gagaAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGt > 2:2157269/1‑140 (MQ=255) agaCATTATAAGCCCAACCACAATCCGCCTGTGGCATTGTTCCCTCAAACTTCTCGCGAGTGCTTAGGCTCACACTCCGGTAAAGACAAAAGCGAGTTGCCCCCGCTTTTCCCTTAATTAACGGATTTCATTCAATAGtt < 1:1861048/140‑1 (MQ=255) aaaTTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCt > 1:2043721/1‑140 (MQ=255) aaTTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTg < 1:1648524/140‑1 (MQ=255) aaTTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCCCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTg < 1:3205833/140‑1 (MQ=255) ttATAAGCCCAACAACAATACGTCTGTGGCATTCTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTCGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGa < 2:2866443/140‑1 (MQ=255) ataAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATg < 2:1604336/140‑1 (MQ=255) taAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGc < 1:4542324/140‑1 (MQ=255) taAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGc < 1:2159933/140‑1 (MQ=255) taAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGc < 1:1021156/140‑1 (MQ=255) cccAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTAt > 1:1770077/1‑140 (MQ=255) ccAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATc < 2:2259186/140‑1 (MQ=255) ccAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATc < 1:3672105/140‑1 (MQ=255) ccAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATc < 1:1812152/140‑1 (MQ=255) caacaacaaTACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATcc > 1:665292/1‑140 (MQ=255) aacaaTACTCCCGTGTCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCTGCTTTTCTATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGac < 2:3234959/140‑2 (MQ=255) tACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGt > 1:3049800/1‑140 (MQ=255) tACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGt < 1:2311412/140‑1 (MQ=255) cGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTaa < 1:4986852/140‑1 (MQ=255) ccTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTaaaa > 2:1399090/1‑140 (MQ=255) cTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAg > 2:861897/1‑140 (MQ=255) cTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAg > 1:2952399/1‑140 (MQ=255) gtgGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGtt > 1:3247944/1‑140 (MQ=255) gtgGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGtt > 2:1318607/1‑140 (MQ=255) gtgGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGtt < 2:4860951/140‑1 (MQ=255) gtgGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGtt > 2:3724586/1‑140 (MQ=255) tgGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGttt > 2:3455098/1‑140 (MQ=255) tgGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGttt > 1:3381381/1‑140 (MQ=255) tgGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGttt > 1:550215/1‑140 (MQ=255) tgGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGttt > 1:916537/1‑140 (MQ=255) tgGCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGttt > 2:1783175/1‑140 (MQ=255) gCATTGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGa < 1:2748257/140‑1 (MQ=255) ttGTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGGTTGATtg > 2:56959/1‑140 (MQ=255) gTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATtgtg > 2:1456699/1‑140 (MQ=255) gTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATtgtg < 1:2399765/140‑1 (MQ=255) gTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATtgtg > 1:1071187/1‑140 (MQ=255) gTTCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATtgtg > 1:3542848/1‑140 (MQ=255) ttCGCTCAAACTTATCGCGAGTTATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTgg > 1:3960278/1‑140 (MQ=255) ttCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTgg > 2:3919342/1‑140 (MQ=255) ttCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTgg < 2:70603/140‑1 (MQ=255) ttCGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTgg < 1:1166865/140‑1 (MQ=255) cGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGaa > 1:1980636/1‑140 (MQ=255) cGCTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGaa > 2:1146468/1‑140 (MQ=255) cTCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAgg > 1:2860082/1‑140 (MQ=255) tCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGa < 1:3749122/140‑1 (MQ=255) tCAAACTTATCGCGAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGa < 1:530630/140‑1 (MQ=255) tagcgcgAGTGATTAGGGTGACACTCAGGTAAAGAAAAAAGCGAGCTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTAAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGCGGtt < 2:2536539/137‑1 (MQ=255) aTCGCGAGTGATTAGGCTCACACTCCGTTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTg > 1:4089972/1‑140 (MQ=255) cgcgAGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTggg > 2:3990145/1‑140 (MQ=255) aGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCAtt > 2:4404862/1‑140 (MQ=255) aGTGATTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCAtt > 1:2337112/1‑140 (MQ=255) aTTAGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCt < 2:3032789/140‑1 (MQ=255) | TAGAGAGGAGCCGCACTTACCAGGCTGACCAGCCATAATAAATTTCGCGTATACATGGTATTCCTTACCGGAGAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCT > NZ_CP025268/3169967‑3170239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |