| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 35,374 | C→G | intergenic (‑2/+4) | caiE ← / ← caiD | carnitine operon protein CaiE/crotonobetainyl‑CoA hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 35,374 | 0 | C | G | 99.4% | 1173.4 / ‑3.0 | 355 | intergenic (‑2/+4) | caiE/caiD | carnitine operon protein CaiE/crotonobetainyl‑CoA hydratase |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base G (187/165); minor base A (2/0); total (189/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.97e-01 | |||||||||||
Only 100 of 359 total aligned reads displayed.
CACCACGCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGCTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGCTTCTTCTAC > NZ_CP025268/35237‑35509 | gCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAAc < 1:1669590/140‑1 (MQ=255) gCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGGTAAc > 2:1556193/1‑140 (MQ=255) aGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGt < 2:231945/140‑1 (MQ=255) aGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGt > 1:1248443/1‑140 (MQ=255) aGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGt < 1:3414229/140‑1 (MQ=255) aGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGt < 2:1267874/140‑1 (MQ=255) aGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGt < 2:3396015/140‑1 (MQ=255) gAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGCACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCt < 2:2883790/140‑1 (MQ=255) aGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCtt > 2:2689211/1‑140 (MQ=255) ggCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCttt > 1:4263616/1‑140 (MQ=255) cGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTcc > 1:1707919/1‑140 (MQ=255) cGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTcc > 2:317711/1‑140 (MQ=255) aGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTGACGGTTGTTAACGTCCTTTacac > 2:3073695/1‑140 (MQ=255) aGTGGGCCGATGTAGACACCGGCTACCACAACCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGCCGAAATAGCTAACGGTTGTTAACGTCCttccagc > 2:2623855/1‑135 (MQ=255) gTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCcaca > 1:913229/1‑140 (MQ=255) gggCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑cc > 1:1426396/1‑140 (MQ=255) gggCCGATGTAGACACCGGCTCACACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑cc > 1:4314460/1‑140 (MQ=255) ccGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGa < 1:274966/140‑1 (MQ=255) gTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATcgcg < 2:2397253/140‑1 (MQ=255) gTAGACACCGGCTCCCACAATCACACCGCCAATCAAGACGGCACTGGGCTGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATcgcg < 2:4444193/140‑1 (MQ=255) acacCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTtc > 2:5090507/1‑140 (MQ=255) cGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCgg > 1:3181574/1‑140 (MQ=255) cGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCgg > 2:805751/1‑140 (MQ=255) cGGCTCCCACAATCACAGCGCCAATCAAGACGGCACTGGGGTGGACAAACGCGGTGGGGTGAACCACCGGAATTAAGCCCTCAAAGGCGTAATAGCTCACTGTTGTGAACGTCCTTTCCACA‑CGGGGTCGCGCttagctg > 2:2920658/1‑135 (MQ=255) cTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCaa > 1:2785222/1‑140 (MQ=255) cTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCaa > 1:1353990/1‑140 (MQ=255) acaATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGcc > 1:3866655/1‑140 (MQ=255) cacaTCGCCAATCAAGACGGCACTGGGATGGACAACCGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCgg < 2:1662564/140‑1 (MQ=255) cacaTCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCgg < 1:2335946/140‑1 (MQ=255) cacaTCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCgg < 1:4665416/140‑1 (MQ=255) acaTCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGc > 1:1449923/1‑140 (MQ=255) aTCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGccc > 1:2191300/1‑140 (MQ=255) cGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCtt > 2:1474425/1‑140 (MQ=255) aTCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATg > 1:2415123/1‑140 (MQ=255) aGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAATGCCAGCGGCCCTTCAATGGCAt < 1:3958049/140‑1 (MQ=255) aGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCAt < 1:1157678/140‑1 (MQ=255) aGACGGCACTGGGATGCACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGCCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCAAGCGGCCCTTCAATGGcct < 1:4152538/140‑3 (MQ=255) gACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATc > 2:1985858/1‑140 (MQ=255) aCGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCt > 2:562206/1‑140 (MQ=255) gCACTTGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTcc < 1:4358894/140‑1 (MQ=255) gCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTcc < 1:3091934/140‑1 (MQ=255) gCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTcc < 1:5121452/140‑1 (MQ=255) cACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCg > 2:4581260/1‑140 (MQ=255) tGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAAt > 1:1024364/1‑140 (MQ=255) gggATGTACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATg < 1:4991861/140‑1 (MQ=255) ggATTGACAAACGCCGTTGGGCCAACCACCGGAATTAACCCCGCAAAGGCGTAGTAGCTCACGGTTGTCAACGTGCGTCCCGGG‑CCGGAGCGCGCTTCTCGGCAATCTCCAGCGGCCCCTCAATGGCATCTTCCGAATgt > 2:3930415/1‑139 (MQ=255) ggATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGc > 1:4297206/1‑140 (MQ=255) ggATGGACAAACGCCGTCGGGTGAACCACCGGAAGTAACCCCGCAAAGGCGTAATAGCTCACGGGTGGTAACGGCCTTTCCACA‑CCGGATCGGGCTTCTGGTCAAACACCAGCGGCCCTTCAGGGGCGTCTTCTGAATGc > 2:733641/1‑140 (MQ=255) aTGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAg < 2:2115701/140‑1 (MQ=255) aTGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAg < 2:4264827/140‑1 (MQ=255) aTGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAg < 2:4297479/140‑1 (MQ=255) ggACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGaa < 2:575539/140‑1 (MQ=255) ggACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGaa < 2:3673979/140‑1 (MQ=255) ggACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGaa < 1:205035/140‑1 (MQ=255) ggACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGaa < 2:1707919/140‑1 (MQ=255) gACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAAc > 2:1029980/1‑140 (MQ=255) gACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAAc > 1:1207424/1‑140 (MQ=255) gACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAAc > 2:596557/1‑140 (MQ=255) gACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAAc > 2:2454280/1‑140 (MQ=255) gACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGGAATAGCACACGGTTGTTAACGACCTTTCCACA‑CCGGATCGCCCTTCTCGGCAAATGCAAGCGACCCTTCAATGGCATATTCCGAATGCAGAAc > 2:1402048/1‑140 (MQ=255) gACAAACGCCGTCGGGTGAACCACCGGAATTAACCACTAAAACGCGACATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCACCGGCCCTTCAATCACATCTTCCTAATGCAGacc > 2:1135720/1‑138 (MQ=255) cAAACGCCGTCGGGTGCACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCg < 2:4542395/140‑1 (MQ=255) ccGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGAt < 1:239489/140‑1 (MQ=255) ccGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGAt < 1:3000278/140‑1 (MQ=255) ccGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGAt < 1:216559/140‑1 (MQ=255) ccGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGAt < 1:354683/140‑1 (MQ=255) ccGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGAt < 1:3246808/140‑1 (MQ=255) cagTCGGGTGAACCACCGGAATTAACCCCTCAATGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAATCGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACTGATGGAt < 2:4123461/138‑1 (MQ=255) gTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAg < 1:1967139/140‑1 (MQ=255) tCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCATCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGagagg > 1:3684838/1‑139 (MQ=255) gggTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAgtgt < 2:486058/140‑1 (MQ=255) tGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTGAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTc > 2:3207264/1‑140 (MQ=255) aaCCACCGGAATTAACCTCTCAACGGCGTAATAGCTCACGGTTGTTAACGTCCTTGCCACA‑CCGCATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCTATGGCAGCTTCCGAATGCAGAACCGCAGGATCGTGTGTcga > 2:1877351/1‑138 (MQ=255) ccaccGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGGGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAaca < 2:3718465/140‑1 (MQ=255) accGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcg < 1:4531423/140‑1 (MQ=255) accGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcg < 2:3582171/140‑1 (MQ=255) ccGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcgc < 2:40415/140‑1 (MQ=255) cGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcgcc < 1:651925/140‑1 (MQ=255) gAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcgccgc < 1:4717807/140‑1 (MQ=255) aaTTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCt < 1:2061444/140‑1 (MQ=255) aaTTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCt < 1:608196/140‑1 (MQ=255) cccTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAata < 2:3276672/140‑1 (MQ=255) cccTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAata < 1:522250/140‑1 (MQ=255) cccTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTCCCACA‑CCGGCTCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAata < 2:1363591/140‑1 (MQ=255) tCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAg > 1:492454/1‑140 (MQ=255) tCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAg > 2:4951252/1‑140 (MQ=255) tCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAg > 2:20509/1‑140 (MQ=255) tCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAg > 1:1590951/1‑140 (MQ=255) tCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAg > 1:2600665/1‑140 (MQ=255) aaGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGa < 1:805751/140‑1 (MQ=255) cGTAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACg > 2:4385050/1‑140 (MQ=255) tAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGct > 2:2547157/1‑140 (MQ=255) tAATAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGct > 1:571170/1‑140 (MQ=255) aaTAGCTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGctt > 2:1374333/1‑140 (MQ=255) aTAGCTCACGGTTGTTAACGTCCTTTCCACACCCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGctt < 1:3772517/140‑1 (MQ=255) cTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGCTtcttct > 1:2588576/1‑140 (MQ=255) cTCACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTG‑TTCAACACGCCGCTGCGAATATAGCGATACGCTTCTTCTa > 1:4586787/1‑140 (MQ=255) cACGGTTGTTAACGTCCTTTCCACA‑CCGTATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCCTCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGCTGCTTCTAc > 1:1547014/1‑140 (MQ=255) cACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGCTTCTTCTAc > 2:4701848/1‑140 (MQ=255) cACGGTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGCTTCTTCTAc > 1:3642728/1‑140 (MQ=255) | CACCACGCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGCTTGTTAACGTCCTTTCCACA‑CCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGCTTCTTCTAC > NZ_CP025268/35237‑35509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |