| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,952,339 | A→G | *33* (TAA→TAG) | ilvL → | ilv operon leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,952,339 | 0 | A | G | 99.5% | 720.5 / NA | 213 | *33* (TAA→TAG) | ilvL | ilv operon leader peptide |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (170/42); minor base C (1/0); total (171/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 215 total aligned reads displayed.
TTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAAAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACT > NZ_CP025268/3952203‑3952474 | tAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGAt > 1:1517290/1‑140 (MQ=255) ttCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGcc > 2:2653836/1‑140 (MQ=255) ttCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGcc > 1:1470881/1‑140 (MQ=255) ttCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGcc > 1:3527380/1‑140 (MQ=255) ttCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGcc > 1:2074556/1‑140 (MQ=255) ttCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGcc > 1:2073713/1‑140 (MQ=255) ttCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGcc > 2:1948416/1‑140 (MQ=255) gtCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGCGTGATTAGCATGGACGAGATTAGCTTGGTGGTGATTATTATCCCACCGTGCGGGGCTGAACTTGTATGAGGAAAGGCGTAGAGATCAAgac > 2:2328941/2‑138 (MQ=255) ccTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGTTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCtt > 1:4269451/1‑140 (MQ=255) ccTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCtt > 1:197613/1‑140 (MQ=255) ccTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCtt > 1:2973038/1‑140 (MQ=255) ccTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCtt > 2:148503/1‑140 (MQ=255) gATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCACGCCTTAACGAACTAAg > 2:4564650/1‑140 (MQ=255) gATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAg > 1:2598598/1‑140 (MQ=255) gATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAg > 1:3952244/1‑140 (MQ=255) aaGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGAcccc < 2:2973038/140‑1 (MQ=255) aaaaGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGc > 2:4957328/1‑140 (MQ=255) gACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACGTGGGCGAGGAAAGGCTTAGAGGTCAAGCCTTAACGAAGTAAGACCCCCGCACCg > 2:3297918/1‑140 (MQ=255) aaTGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAgg > 1:1169982/1‑140 (MQ=255) aGCCCTTCTACGAGTGATTAGCCTGGTAGTGATTAGCGTGGTGGTGATCATTATCCCACCGTGCGGGGCTGCACTTGGACGAGAAAAGGCTTAGAGAGCAAGCCTGAACGAACTAAGACCCCCGCACCGAAGGGGCCggg > 2:3797558/1‑140 (MQ=255) cccTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCggggg > 1:3541989/1‑140 (MQ=255) cGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑tttttttt > 1:1084866/1‑140 (MQ=255) gAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCGCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGATAGCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑GTTTTTTT‑g < 2:3103359/140‑1 (MQ=255) aGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑Ga > 1:4680990/1‑140 (MQ=255) gTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GAc < 2:2511889/140‑1 (MQ=255) gTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GAc > 1:605287/1‑140 (MQ=255) aTTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCtt > 2:1881773/1‑140 (MQ=255) aTTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCtt > 1:4319453/1‑140 (MQ=255) aTTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCtt > 1:3616377/1‑140 (MQ=255) aTTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCtt > 1:2229848/1‑140 (MQ=255) aTTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑ATTTTTTT‑GACCtt > 1:1373927/1‑140 (MQ=255) ttAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTACACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑TACCTTa > 2:2883775/1‑140 (MQ=255) ccTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTaaaaa < 2:2074556/140‑1 (MQ=255) gTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATa > 1:3645756/1‑140 (MQ=255) gTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATa > 1:3332908/1‑140 (MQ=255) tCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTT‑GACCTTAAAAACATa > 1:4054494/1‑140 (MQ=255) aTTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCgag > 1:3188449/1‑140 (MQ=255) ttAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCgagg < 2:3165176/140‑1 (MQ=255) gCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGc > 1:36858/1‑140 (MQ=255) gCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGc > 2:1213487/1‑140 (MQ=255) gCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGc < 2:706257/140‑1 (MQ=255) cGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGAt > 1:4381151/1‑62 (MQ=255) cGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCa > 2:3462731/1‑140 (MQ=255) cGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCa > 1:5101050/1‑140 (MQ=255) cGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCa < 1:4540813/140‑1 (MQ=255) tggtggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGa < 2:2909750/140‑1 (MQ=255) tggtggtgATTATTATCCCACCGTGCGGGGCTGCAATTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGa < 2:786900/140‑1 (MQ=255) gtggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACa < 2:4141445/140‑1 (MQ=255) tggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGTGGAAAGGCGTAGAGATCAAGCCCTAACGAACTAGGACCCCCGCACCGAGATGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACaa > 2:1552055/1‑140 (MQ=255) gtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATg > 1:5195606/1‑140 (MQ=255) gtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATg > 2:3782322/1‑140 (MQ=255) attattATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAAt > 1:1618540/1‑140 (MQ=255) attattATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAAt > 2:3172233/1‑140 (MQ=255) tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGGGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg > 2:4766392/1‑140 (MQ=255) tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGa > 1:4963421/1‑127 (MQ=255) tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg > 2:2072771/1‑140 (MQ=255) tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGca > 2:833499/1‑140 (MQ=255) tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGca > 2:4353770/1‑140 (MQ=255) ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGcaca < 1:2604564/140‑1 (MQ=255) cACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGcaca > 1:2778943/1‑140 (MQ=255) ccGTGCGGGGCTGCACTTGGACGAGGAAGGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑CTTTTTTT‑GTCCCTAAAAACATAACAGAGGAGCAGACAATGAATAACAGCACaaaa > 2:1753565/1‑140 (MQ=255) ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAAc < 2:561463/51‑1 (MQ=255) ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaaa > 1:4601100/1‑140 (MQ=255) ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaaa > 1:1704992/1‑140 (MQ=255) ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaaa > 1:1862727/1‑140 (MQ=255) ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaaa > 1:2037307/1‑140 (MQ=255) ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaaa > 1:2461150/1‑140 (MQ=255) gTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAAtg > 2:2783218/1‑139 (MQ=255) tGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc > 1:1932079/1‑140 (MQ=255) tGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc > 1:4815131/1‑140 (MQ=255) tGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAACTc > 1:4458643/1‑140 (MQ=255) tGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTGTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc > 1:3707319/1‑140 (MQ=255) cGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg > 1:3602080/1‑140 (MQ=255) ggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTcgggtt > 2:4275302/1‑135 (MQ=255) tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtctc > 1:1017065/1‑140 (MQ=255) cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCg > 2:2055752/1‑67 (MQ=255) cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa > 1:3296123/1‑140 (MQ=255) cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑g < 1:912244/80‑1 (MQ=255) cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa > 1:3560246/1‑140 (MQ=255) cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa > 1:1109995/1‑140 (MQ=255) cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa > 2:1307392/1‑140 (MQ=255) cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa > 2:4261263/1‑140 (MQ=255) cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa > 1:5176082/1‑140 (MQ=255) cACGTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCTCCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCGTAAAAACATAACCGAGGAGCAGACAATGAATCACAGGACAAATATCTGTTTCTCaa > 2:4508846/1‑140 (MQ=255) ggACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACGCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACGGAGGAGCAGACAATGAATAACAGCACAAAAGTCTGTGTCTCAAGATTc > 2:3950831/1‑140 (MQ=255) ggACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTc > 1:3825153/1‑140 (MQ=255) ggACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTc > 1:5062287/1‑140 (MQ=255) ggACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTc > 2:1334309/1‑140 (MQ=255) gACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCa < 2:1464621/140‑1 (MQ=255) aGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc > 1:1745638/1‑140 (MQ=255) aGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc < 2:3541989/140‑1 (MQ=255) aGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc < 2:1024452/140‑1 (MQ=255) aGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc > 2:74184/1‑140 (MQ=255) ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACg < 2:1840470/140‑1 (MQ=255) ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGGCCGCGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACg < 1:3704740/140‑1 (MQ=255) gAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg < 1:3782322/140‑1 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaa < 2:671252/140‑1 (MQ=255) gCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTTGGACCTTAAAAACATAACCGGGGGGCGGACAATGATTACAACCCCAAAATTCGGTTTCTC‑AGGTTCCGGGCgggggaa > 1:2778/1‑137 (MQ=255) gCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCCGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaac < 2:1268183/140‑1 (MQ=255) cTTAGAGATCAAGCCTTCACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGTGaact < 1:2822829/140‑1 (MQ=255) | TTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAAAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGG‑TTTTTTTT‑GACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACT > NZ_CP025268/3952203‑3952474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |