Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 4,026,258 A→G *261* (TAA→TAG
L162L (CTT→CTC
tatD →
rfaH ←
3'‑5' ssDNA/RNA exonuclease TatD
transcription/translation regulatory transformer protein RfaH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252684,026,2580AG100.0% 1080.3 / NA 321*261* (TAA→TAG
L162L (CTT→CTC
tatD
rfaH
3'‑5' ssDNA/RNA exonuclease TatD
transcription/translation regulatory transformer protein RfaH
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (112/209);  total (112/209)

Only 100 of 321 total aligned reads displayed.

CATCATCCCGGCGCAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAAAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAATGGCCTGAAAGCCTTCGAACGCGCCTTCGGTA  >  NZ_CP025268/4026122‑4026390
                                                                                                                                        |                                                                                                                                    
  tcatcCCGGCGCAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGttt                                                                                                                                 >  2:2268566/1‑140 (MQ=255)
   catcCCGGCGCAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTg                                                                                                                                >  1:786487/1‑140 (MQ=255)
       ccGGCGCAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGa                                                                                                                            <  2:1812649/140‑1 (MQ=255)
          gcgcAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACt                                                                                                                         <  1:935186/140‑1 (MQ=255)
          gcgcAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACt                                                                                                                         <  1:1332339/140‑1 (MQ=255)
          gcgcAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACt                                                                                                                         <  2:1228995/140‑1 (MQ=255)
          gcgcAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACt                                                                                                                         <  1:2150061/140‑1 (MQ=255)
          gcgcAACGAGCCAGCCCATCTGCCACATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGACGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACCCTGTTTGGGATTGCGTTTTAGACTTTGCGGAACt                                                                                                                         <  1:481990/140‑1 (MQ=255)
            gcAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCg                                                                                                                       <  1:1443553/140‑1 (MQ=255)
            gcAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCg                                                                                                                       <  2:4303669/140‑1 (MQ=255)
            gcAACGAGCCAGCCCATCTGCCCCAGATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCg                                                                                                                       <  2:2787804/140‑1 (MQ=255)
              aaCGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGt                                                                                                                     <  2:400895/140‑1 (MQ=255)
              aaCGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGt                                                                                                                     <  2:2219540/140‑1 (MQ=255)
              aaCGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGt                                                                                                                     <  2:3717292/140‑1 (MQ=255)
              aaCGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGt                                                                                                                     <  1:2256400/140‑1 (MQ=255)
              aaCGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGt                                                                                                                     <  1:4782536/140‑1 (MQ=255)
              aaCGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGt                                                                                                                     <  1:2943400/140‑1 (MQ=255)
              aaCGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCGGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCggg                                                                                                                     <  2:200066/140‑2 (MQ=255)
              aaCGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGAAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGATTTAGAGTTTGCGGAACTCGGt                                                                                                                     <  1:3951968/140‑1 (MQ=255)
                   gccagccCATCTGCCCCATATTTTGCACCGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTAttct                                                                                                                <  2:2648986/140‑1 (MQ=255)
                   gccagccCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTAttct                                                                                                                <  1:4919724/140‑1 (MQ=255)
                    ccagccCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATACCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTAttctt                                                                                                               <  1:4648159/140‑1 (MQ=255)
                        cctaTCTGCCCCATATTTTGCAACGTATTGCGCATTGGCGTGGAGTATATGCCGCATGGCTGGCTGACACCACGGATGCTAATGTCAAACCACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTcaca                                                                                                           <  2:1676574/137‑1 (MQ=255)
                        cccATCTGCCCCTTATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTGTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTcaca                                                                                                           <  2:4772206/140‑1 (MQ=255)
                        cccATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTcaca                                                                                                           <  1:1594462/140‑1 (MQ=255)
                        cccATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTcaca                                                                                                           <  2:1785385/140‑1 (MQ=255)
                        cccATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTcaca                                                                                                           <  1:4373659/140‑1 (MQ=255)
                        cccATCTGCCCCATATTTTGAAACGTACTGCGCCCTGGCGTGGAGAAGATCCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTCGAGTTTGCGGAACTCGGTATTCTTcaca                                                                                                           <  2:114305/140‑1 (MQ=255)
                        cccATCTGCCCCATATATGGCAACGTATTGAGCACTGGCGTGGAGAAGATGAAGCATGGCTGGCTGCCACCACGGATGCTAATGTCGAAACACTGTTTGAGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTcaca                                                                                                           <  2:728683/140‑1 (MQ=255)
                        cccAGCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTcaca                                                                                                           <  1:2386667/140‑1 (MQ=255)
                         ccATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCacac                                                                                                          <  2:5018210/140‑1 (MQ=255)
                         ccATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCacac                                                                                                          <  2:1341261/140‑1 (MQ=255)
                         ccATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCacac                                                                                                          <  2:2314904/140‑1 (MQ=255)
                         ccATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCacac                                                                                                          <  1:2625543/140‑1 (MQ=255)
                          cATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACt                                                                                                         <  2:1934304/140‑1 (MQ=255)
                          cATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACt                                                                                                         <  1:994336/140‑1 (MQ=255)
                          cATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACt                                                                                                         <  1:1997674/140‑1 (MQ=255)
                            tCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACtgt                                                                                                       >  2:786793/1‑140 (MQ=255)
                             cTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACAGTGTTTGGGATTGCGTGTTAGAGTTTGCGGAACTCGGTACTCTTCACACtgtg                                                                                                      >  2:3133188/1‑140 (MQ=255)
                                 cccATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTa                                                                                                  <  1:1736430/140‑1 (MQ=255)
                                  ccATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAGTGTCAAAACACTGTTTGGGATTGCTTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTaa                                                                                                 >  2:2458515/1‑140 (MQ=255)
                                  ccATATTTTGCAACGTATTGCGCACTGGCGGGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTaa                                                                                                 >  1:3381844/1‑140 (MQ=255)
                                   cATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCATACTGTGCTTAAt                                                                                                >  1:4450184/1‑140 (MQ=255)
                                    atatTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAAtc                                                                                               <  2:3467662/140‑1 (MQ=255)
                                    atatTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAAtc                                                                                               <  1:1149895/140‑1 (MQ=255)
                                     tatTTTGCAACGTATTGCGCACTGGCGTGGATCAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAAtct                                                                                              >  2:361987/1‑140 (MQ=255)
                                     tatTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCGGCCACCACGGATGCGAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAAtct                                                                                              <  1:2690947/140‑1 (MQ=255)
                                         ttGCAGCGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCttt                                                                                          <  2:3856481/140‑1 (MQ=255)
                                         ttGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCttt                                                                                          <  2:2366025/140‑1 (MQ=255)
                                          ttcagcGTTTTGTGCCCTGGCGTGGATAAGATGCCGCATGCCTGCCTGCCAACACGGATTCTAATGTCAAAACACTGTTTGGGCTTGCGTTTTAGAGCTTGCGGAACTCTGTATTCTTCACACTTGGCCTATTCCCTtta                                                                                         >  2:3301152/6‑140 (MQ=255)
                                          tGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTtta                                                                                         >  2:4257225/1‑140 (MQ=255)
                                          tGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTtta                                                                                         >  2:630156/1‑140 (MQ=255)
                                           gCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTttat                                                                                        <  1:5017049/140‑1 (MQ=255)
                                              aCGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCAAACTGTGCTTAATCTCTTTATtaa                                                                                     <  1:3116816/140‑1 (MQ=255)
                                                        cACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAg                                                                           <  1:5084476/140‑1 (MQ=255)
                                                         aCTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGc                                                                          >  1:4529520/1‑140 (MQ=255)
                                                          cTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCa                                                                         <  1:232873/140‑1 (MQ=255)
                                                          cTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCa                                                                         <  2:506572/140‑1 (MQ=255)
                                                           tGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCaa                                                                        >  2:4376887/1‑140 (MQ=255)
                                                           tGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCaa                                                                        <  1:651334/140‑1 (MQ=255)
                                                           tGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCaa                                                                        >  1:1020177/1‑140 (MQ=255)
                                                           tGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCaa                                                                        >  1:600182/1‑140 (MQ=255)
                                                           tGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCaa                                                                        >  1:4242960/1‑140 (MQ=255)
                                                           tGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTGGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATATCTTTATTAATAAGATTAAGCaa                                                                        >  2:3406848/1‑140 (MQ=255)
                                                             gCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATa                                                                      >  2:188984/1‑140 (MQ=255)
                                                                tGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCa                                                                   <  1:3218122/140‑1 (MQ=255)
                                                                tGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCa                                                                   <  1:4129914/140‑1 (MQ=255)
                                                                tGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCa                                                                   <  2:2694896/140‑1 (MQ=255)
                                                                     aagaTGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGgag                                                              <  2:2688330/140‑1 (MQ=255)
                                                                     aagaTGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGgag                                                              <  1:28393/140‑1 (MQ=255)
                                                                       gaTGCCGCCTGGCTGGCTACCACCACGGATGTTAATGTCAAAACACTGGTCGTGATTGCGATTTAGAGTTAGCGGAACTCGGTATACTTCACACTGTGCTTAATCTCTTTATTAATAAGATTACGCAATATCATGgagcg                                                            >  2:1052914/1‑140 (MQ=255)
                                                                       gaTGCCGCATGGCTGGCTGCCACCAGGGATGCTAATTTCAAAACACTGTTTGGGATTGCGTTTTAGAGGTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAAGAAGAGTAAGCAATAGCATGgtgcg                                                            >  2:93354/1‑140 (MQ=255)
                                                                       gaTGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTGACACTGTGCTTAATCTCTTTATTAATAAGATAAAGCAATAGCATGgagcg                                                            >  1:2663851/1‑140 (MQ=255)
                                                                       gaTGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCt                                                                                                    >  2:3573908/1‑100 (MQ=255)
                                                                       gaTGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCt                                                                                                    <  1:3573908/100‑1 (MQ=255)
                                                                       gaTGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGgagcg                                                            >  2:3272999/1‑140 (MQ=255)
                                                                       gaTGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGgagcg                                                            >  2:2553301/1‑140 (MQ=255)
                                                                       gaTGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGgagcg                                                            >  2:5111002/1‑140 (MQ=255)
                                                                       gaTGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGGTTTAGAGTTTGCGGGACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGgagcg                                                            >  2:2041111/1‑140 (MQ=255)
                                                                       gaTGCCGCATGGCGGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGgagcg                                                            <  2:1466689/140‑1 (MQ=255)
                                                                            cGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCacac                                                                                                          <  1:286088/89‑1 (MQ=255)
                                                                            cGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCt                                                       <  2:4551587/140‑1 (MQ=255)
                                                                            cGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCt                                                       >  1:84780/1‑140 (MQ=255)
                                                                             gCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTc                                                      >  1:1578993/1‑140 (MQ=255)
                                                                              cATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCa                                                     <  1:1270874/140‑1 (MQ=255)
                                                                               aTGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCAc                                                    >  1:2720480/1‑140 (MQ=255)
                                                                                  gctggctgCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGCGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCAt                                                 <  2:3256280/140‑1 (MQ=255)
                                                                                  gctggctgCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCAt                                                 >  1:2285264/1‑140 (MQ=255)
                                                                                      gctgCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCggg                                             >  2:4135207/1‑140 (MQ=255)
                                                                                      gctgCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCggg                                             >  2:1552567/1‑140 (MQ=255)
                                                                                                  gATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAAt                                 <  1:4085513/140‑1 (MQ=255)
                                                                                                            tCAAAACACTGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAATGGCCTGAAAg                       >  2:4842735/1‑140 (MQ=255)
                                                                                                                     tGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAATGGCCTGAAAGCCTTCGAAc              >  1:1870829/1‑140 (MQ=255)
                                                                                                                     tGTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAATGGCCTGAAAGCCTTCGAAc              >  1:702500/1‑140 (MQ=255)
                                                                                                                      gTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAATGGCCTGAAAGCCTTCGAAcg             >  2:5009540/1‑140 (MQ=255)
                                                                                                                      gTTTGGGATTGCGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAATGGCCTGAAAGCCTTCGAAcg             <  2:2054797/140‑1 (MQ=255)
                                                                                                                       tttGGGATTGCGCTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAATGGCCTGAAAGCCTTCGAAcgc            >  2:5152223/1‑140 (MQ=255)
                                                                                                                                 cGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGgag                                                              >  1:517737/1‑80 (MQ=255)
                                                                                                                                 cGTTTTAGAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAATGGCCTGAAAGCCTTCGAACGCGCCTTCGGta  >  2:3336988/1‑140 (MQ=255)
                                                                                                                                 cGTGTTAGAGTTTGCGGAACTCGGTATTGTTCACACTGTGCTTAATGTCTTGATGAATAAGATGAAGCAATAGCGTGGAGGGAGCCTCACCATCGGGTTCGGTGAAAATGTCCTGAAAGGCGTTGGACGCGCCTTAGGta  >  2:118946/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                    
CATCATCCCGGCGCAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAAAGTTTGCGGAACTCGGTATTCTTCACACTGTGCTTAATCTCTTTATTAATAAGATTAAGCAATAGCATGGAGCGAGCCTCACCATCGGGTTCGGTGAAAATGGCCTGAAAGCCTTCGAACGCGCCTTCGGTA  >  NZ_CP025268/4026122‑4026390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: