| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,826,683 | (A)7→8 | intergenic (‑247/+51) | chbB ← / ← osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,826,676 | 1 | . | A | 92.9% | 1552.3 / 93.4 | 441 | intergenic (‑240/+58) | chbB/osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Reads supporting (aligned to +/- strand): ref base . (23/8); new base A (286/121); total (311/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 444 total aligned reads displayed.
GCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826541‑1826810 | tataCGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑ACAAA‑AA‑A‑CCGgcgc > 1:249410/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGcc > 2:4947331/1‑140 (MQ=255) ataGACCTGAGCTATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCg > 2:5294719/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCg > 2:2492697/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGAACTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCg > 2:2140889/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGt < 2:2333950/140‑1 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGt > 1:5027328/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAACTGTATCACCTTGACCTGTGGTTATGACCATCTACACATTTCGGGCAAATACTTCGCGAAGATAATCAAGAACTCAGGCCAA‑AAA‑AA‑A‑CAGGCGCAATGGCCGGt > 2:4687270/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGCAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGttt > 1:1009100/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGttt > 1:5325990/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGttt > 1:4483298/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGttt > 1:4523436/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTc < 1:2667795/136‑1 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:979956/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:805749/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:4590858/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:5109505/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:1273897/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:1733132/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:4341563/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:197022/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:2926461/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:3453359/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:4273392/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:4166856/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:4314092/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:3829173/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:3738021/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:2319958/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:649261/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:1745603/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:1587411/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:1945379/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:2104070/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:2818565/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:5181002/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:3098534/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 2:5108056/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:1156550/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtt > 1:1268667/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCgtg > 1:4732048/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTACgtt > 2:3597470/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTGCCgtt > 2:2528324/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAAATCAGGCCAA‑AAA‑AA‑A‑CCGGCGCACTGGCCGGTTTCGgtt > 2:615213/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTGTCTCCTTGACCTGTGGGTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGATGATAATTAAGAACTCATGCCAA‑AAA‑AA‑A‑CCGGCTCAATGGCCTGTTTCCgtt > 2:683987/1‑140 (MQ=255) aGCAATAGTATTTCTGTGACCTTATAAATGGTGTCTCCTTGACCTGTGGTTAGGACCCTTTTCACATTTCGGGCAAATAATGCGCGAAGATGAGTAAGTACGCAGGCC‑AGAAA‑AA‑A‑CCGGCGCTATGGCTGGTTGGCgtt > 2:1679848/1‑140 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGGCGGTTTCCGTTGTTACTCAAg > 2:268041/1‑140 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTAAAg > 1:3221347/1‑140 (MQ=255) ttGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTc > 2:2741111/1‑140 (MQ=255) tGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGCCCCTTTTCAAATTTCCGTTAAATATTTCGCGAAGATAATTAAGCAATCATGCC‑A‑AAAGAA‑A‑CCGGCACAATACCCACTTTCTGTTGTTACTCAAGCTTTCa > 2:3409804/1‑140 (MQ=255) tGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCa > 1:1889692/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑AAA‑AAGA‑CCGGCGCAATGGCCGGGTTCCGTTGTTACTCAAGCTTTCAGa > 1:4876838/1‑140 (MQ=255) ccTTATAAATCGCTTCGCCTTCAGCTGTGGGTATGACCCTCTTCGCATTTCGGGCAAATAATTCGCGAGGATGCTTAAGAGCTCAGGCCAA‑AAA‑AA‑A‑CCTGCGCAGTTGCCGGTTTCCGTTGTTACTCAAGCTTTCAgtc < 2:2615568/140‑3 (MQ=255) ttATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGACCTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGa < 1:3599779/140‑1 (MQ=255) gTTTCTCCTTGACCTGTGGTTNTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTAc > 1:1492719/1‑140 (MQ=255) ctcCTTGACCTGTGGTTATGCCCCTCTTCACATTTCGGGCAAATACTTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTGTCCGTTGTTACTCAAGTTTTCAGACGAATTGATTACTTCg < 2:5146107/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 2:4506193/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 1:2592138/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 1:1717136/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 1:4410646/140‑1 (MQ=255) tcCTTGACCGGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGc < 2:1029892/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAACTAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑AAA‑AA‑ACCCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:1417552/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:4874058/140‑1 (MQ=255) ttgtcttgttgtTATGACCCTCTGCACACTTGGGGCAGATAATTCGCGAGGATGCTGTATTCCGCTTGAAAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGc < 2:1499069/134‑1 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 2:2368171/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 2:2883843/140‑1 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 2:3109643/140‑1 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGACCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGCTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 1:2392295/1‑140 (MQ=255) ggTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATc > 1:3394346/1‑140 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 1:900842/140‑1 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 2:4806782/140‑1 (MQ=255) tGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg > 2:2040160/1‑122 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:4077654/140‑1 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:3210228/140‑1 (MQ=255) gACCCTCTTCACATTTAGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:373334/140‑1 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTa > 2:4002027/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATCATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTACAGACGAATTGATTACTTAGCAGCCTGTGGATCAGTGTCGTAtt > 2:3299554/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTTAGAACTCAGGCC‑A‑AAA‑AACA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTACAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 2:4617938/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 1:4210703/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 1:2026006/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 2:2547655/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 2:1204918/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCa > 2:837007/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCa > 1:1644732/1‑140 (MQ=255) acaTTTCGGGCAAATACTTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:4405491/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCCAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:3829173/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:1830213/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:1437422/140‑1 (MQ=255) tCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAGTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGt > 2:4414988/1‑140 (MQ=255) cGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTc > 1:1049268/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGAc < 1:5354253/89‑1 (MQ=255) aaGATAATTAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTtgat < 1:3921218/140‑1 (MQ=255) tAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 1:2913470/140‑1 (MQ=255) tAAGAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 1:4072388/140‑1 (MQ=255) gAACTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTGGTTACTCAAGCTTTCAGACGAATGGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCgg > 1:2750475/1‑140 (MQ=255) aaCTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 1:649261/140‑1 (MQ=255) aCTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTa < 1:341932/140‑1 (MQ=255) aCTCAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTa < 1:1785463/140‑1 (MQ=255) cAGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTGTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatca < 1:4006294/140‑1 (MQ=255) aGGCCAA‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatcat > 1:3532629/1‑140 (MQ=255) | GCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑AAA‑AA‑A‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826541‑1826810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |