| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,204,490 | (A)7→8 | pseudogene (175/3632 nt) | CXP41_RS11705 → | DUF4132 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,204,483 | 1 | . | A | 96.7% | 989.8 / 20.0 | 271 | pseudogene (168/3632 nt) | CXP41_RS11705 | DUF4132 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (4/5); new base A (123/138); total (128/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 289 total aligned reads displayed.
AACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑A‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204346‑2204617 | ccAACTGGAACTGTAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGACGTCTCATCCAGACATTGTGTGATCAATTGCTACAAAAAGCTGAGAAG‑a‑aaa‑aaa < 2:4622159/140‑1 (MQ=255) aaCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑aaa‑aaaac > 1:819358/1‑138 (MQ=255) aaCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑aaa‑aaaac > 1:1879373/1‑138 (MQ=255) aCTGGAACTGAAATATAAAAAAGGCAACACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑aaa‑aaaaca < 1:3962272/140‑4 (MQ=255) aCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑aaa‑aaaaca < 1:5308379/140‑4 (MQ=255) aCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑aaa‑aaaaca > 1:2810042/1‑137 (MQ=255) aCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑aaa‑aaaaca < 1:2677313/140‑4 (MQ=255) gaccTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGt < 2:1068915/137‑1 (MQ=255) aCTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTcg > 2:3868963/1‑139 (MQ=255) gAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGc > 2:2381630/1‑140 (MQ=255) aaaTATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGCTGAATAGCTACAAAAAGCAGAGAAGAA‑AAA‑AAACACTGTCTGGCg > 2:3657183/1‑140 (MQ=255) aaaTATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCg > 1:1846320/1‑140 (MQ=255) taAAAAAGGCAAAACGCCGCTCAGTCATCGTCTCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATg > 1:888794/1‑140 (MQ=255) aaaaaaGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATga > 2:589280/1‑140 (MQ=255) agcgccgcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACCAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTGTCAc < 2:1169945/138‑1 (MQ=255) cgcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAg > 1:4588696/1‑140 (MQ=255) tCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGt < 1:719255/140‑1 (MQ=255) cATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTc < 2:3641261/140‑1 (MQ=255) cATCGTCGCTGGCCGGGCGAACCAGTGTCAGTTCTCACTGGACGTCTCATCCAGACATTGGGTGATGAACTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTc < 2:631713/140‑1 (MQ=255) tcgtctCTGGCCGGGCGAACCAGTGTCCGGTATCACTGGAAGTCTCATCCAGACATTGGGCGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTCGATTGGAGGGGCAGTCCg > 2:1183722/1‑140 (MQ=255) gtcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGcc < 2:5057484/140‑1 (MQ=255) gtcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATCGGGGGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATGTTTCACTGGAGTGGCAGTCCGcc > 2:2147357/1‑140 (MQ=255) tcgCTAGACGAGCGAACCCGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTAGGTGATGAATAGCTACAAAACGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCa < 2:1420121/140‑1 (MQ=255) gCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATc > 1:1941652/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 1:3417856/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 1:1001995/1‑140 (MQ=255) gCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGc < 2:1770508/140‑1 (MQ=255) gCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGc < 1:1526974/140‑1 (MQ=255) ccGGGCGAACCAGTGTTCGTTAACACTGGCAGCCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATCAGACTTTTGTACTGGAGTGGCAGTCCGCCATCACGCa < 2:3265200/140‑1 (MQ=255) ccGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCa < 1:5043722/140‑1 (MQ=255) ccGGGCGAACCAGTGTCAGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACACTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCa < 2:2059338/140‑1 (MQ=255) cGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGAGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAg > 2:3392372/1‑140 (MQ=255) gCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGcc > 1:3010943/1‑140 (MQ=255) cGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCa < 2:714488/140‑1 (MQ=255) cGAACCACTTTTCGTTCTCACTTGAAGTCTAATCCTTACATTGGGTGATGAATTTCTACAAAAGGCTGAGAAG‑A‑AAATAATCATTGTCTGGAGTTATGAGAATTTTTCTCTGGGGGGGCAGTCCGCCATCACGCAGGCCa < 2:1521407/140‑1 (MQ=255) aaCCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATc < 2:1962154/140‑1 (MQ=255) gtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGa > 1:1073332/1‑140 (MQ=255) gtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGa > 2:5254129/1‑140 (MQ=255) gtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGa > 1:1367263/1‑140 (MQ=255) tATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCg > 2:4558411/1‑140 (MQ=255) tATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCg > 1:5332097/1‑140 (MQ=255) aTCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑A‑AAAGAAACATGGTCTGGCGTTAGGAGAATGTTTCACTGGAGTGGCAGGCCGCGATCACGCAGGCCATCAACTTGATCGGCGa > 2:3162490/1‑140 (MQ=255) cACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAac > 1:2698986/1‑140 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac > 1:1133414/1‑140 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac > 1:2209731/1‑140 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa < 1:4942055/140‑1 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 2:3495146/1‑140 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 1:3862163/1‑140 (MQ=255) aGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGAGCGGCGAACACAAAcc > 2:4064377/1‑140 (MQ=255) tctcATCCAGACATTGGGTGATGAATTACTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCt > 2:3002647/1‑140 (MQ=255) cctcACCAAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCt < 2:4331880/139‑1 (MQ=255) tcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCa > 2:4863248/1‑140 (MQ=255) tcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGCAGTTGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCa > 1:3811409/1‑140 (MQ=255) aTCCAGACATTGGGGGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATGGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAt > 2:4573192/1‑140 (MQ=255) ccAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcc > 2:1907929/1‑140 (MQ=255) aTTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggccc > 1:2051118/1‑140 (MQ=255) aTTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggccc > 1:4488617/1‑140 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcccgg > 1:5073236/1‑140 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcccgg > 2:5206344/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGTCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:461973/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:2086196/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:1447873/1‑140 (MQ=255) atgaATTGCTACAAAAAGCCGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:4676886/1‑140 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 2:2264212/140‑1 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg > 2:2442344/1‑140 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 2:2567351/140‑1 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 1:2427644/140‑1 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAG‑ACAAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 2:903173/140‑1 (MQ=255) gaATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATggc > 2:872562/1‑140 (MQ=255) gaATTGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGGCCGCCATCACGCAGGCCATCAACTTGATCGGCGGAGACAAATCATCAATCCCGGCCCGGACAATgtc > 2:1719228/1‑138 (MQ=255) tgatACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:5243340/137‑1 (MQ=255) tGCTACAAAAAGCTGAGCAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:3406757/140‑1 (MQ=255) tGCTACAAAAAGCTGAGACGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:2529654/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCTTCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:4238737/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAACCCCTCAATCCCGGCCCGGACAATGgcggcg < 1:963126/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAGTGgcggcg < 2:3785271/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:4386390/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:1022523/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:1185663/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 2:852577/1‑140 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:768450/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 2:667247/1‑140 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:2337366/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:331260/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:3541899/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:3880366/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:4604312/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:476970/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:5356306/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:1357554/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:2698986/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:290032/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACCTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:3602737/140‑1 (MQ=255) tGCCACAAACACCTCAGAAGAA‑AAA‑AAACATTGTCCGTCGTTATGAGAATTTTTCACTGGCGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:4254823/140‑1 (MQ=255) cTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCt < 2:3041397/140‑1 (MQ=255) cTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCt > 1:338065/1‑140 (MQ=255) cTACAAAAAGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCt > 1:172125/1‑140 (MQ=255) aaaaaaGCTGAGGAG‑A‑AAACAAACATTGGCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGc < 2:1817770/139‑1 (MQ=255) aaaaGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 1:4572741/1‑133 (MQ=255) aGCTGAGAAGAA‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTa > 2:215143/1‑140 (MQ=255) | AACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑A‑AAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204346‑2204617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |