| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,769,852 | +C | intergenic (‑52/‑89) | yfjM ← / → rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,769,848 | 1 | . | C | 97.4% | 735.0 / 10.9 | 228 | intergenic (‑48/‑93) | yfjM/rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Reads supporting (aligned to +/- strand): ref base . (2/4); new base C (79/143); total (81/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 239 total aligned reads displayed.
CTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑CC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCA > NZ_CP025268/2769711‑2769982 | cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑cc < 1:4839348/140‑1 (MQ=255)cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑cc < 1:2705691/140‑1 (MQ=255)cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑cc < 1:3067221/140‑1 (MQ=255)cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGACGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑cc < 2:4437728/140‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑cc‑c‑c < 2:602726/140‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑cc‑c‑c < 1:3871064/140‑1 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑cc‑c‑cctat > 2:279676/1‑136 (MQ=255) ctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTc > 1:3479367/1‑140 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGTAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCa < 2:5030102/140‑1 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGACACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAg < 1:4451012/140‑1 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTaa > 1:4224524/1‑140 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAAtt > 1:3443463/1‑140 (MQ=255) acgTATCGAGTTGCTGCTTGCTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCCTTTTTTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑CC‑CACTATTCAGGTGGCTAAATTTAg < 2:1655288/138‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAg < 1:1296912/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAg < 1:4806636/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAg < 1:2423532/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAg < 2:3480404/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGCTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGTCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAg < 1:2808930/140‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCa < 2:4270389/140‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCa < 1:5133404/140‑1 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCaa < 2:1045308/140‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCCTCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAAt < 2:4579088/140‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAAt < 1:5060014/140‑1 (MQ=255) aGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCaa < 2:2182717/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:858116/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:1410326/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:1637648/140‑1 (MQ=255) ttGATGCTTGGTGAGATCCGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTACATTTAGCAAATCAATa < 2:1140687/140‑1 (MQ=255) gtgctgcTTGGTGATATCAGGAAGAGGTTACCGAAATGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCCGTAGACGATCCTGCCCTATAGTTGGTGTG‑CCAC‑CTCTTCAGGTGGCTAAATTTAGCAAATCAATa < 2:2140063/139‑1 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATacac > 2:711527/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATacac > 2:3346284/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATacac > 1:4370851/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATacac > 2:941399/1‑140 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACtt < 2:247095/140‑1 (MQ=255) ttGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCa < 1:2354762/140‑1 (MQ=255) tGGTGAGATCAGGATGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCACATCAATACACTTCAg < 2:1331996/140‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 2:4511740/1‑140 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgg > 2:2225430/1‑140 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 2:35090/140‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 1:2324518/140‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 2:5184924/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:4200891/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:4948514/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGCCATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:920380/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGTCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:352439/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:3050805/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATACTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATGTAGCAAATCAACACACTTCAGGGGGGta < 2:4343860/140‑1 (MQ=255) gagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTa < 2:2098766/140‑1 (MQ=255) gagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTa < 1:4109506/140‑1 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCCTTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTAAAGGTGGAGTGCCC‑C‑CTATACAGCGGGCTAGATTTAGCAAATCAATACACTTCAGGGGGGTATTATCGTgga > 1:967753/1‑140 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTaga > 1:1087857/1‑140 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTagag > 2:45006/1‑140 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTagag < 2:3045444/140‑1 (MQ=255) ttACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGt < 2:3647158/140‑1 (MQ=255) tACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGtt > 2:3294431/1‑140 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGttt > 1:2816420/1‑140 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGTCGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTc < 2:4281077/140‑1 (MQ=255) aaCGATGGACAGCATCCCCCATTTTGGGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCa < 2:4022176/140‑1 (MQ=255) aCGATGGACATCATCACCCATTTTGTGAACTGCCCCCCCGGTAGACGATCATGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGTTGGCTAAATTTAGAAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCac < 2:4123312/140‑2 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCata < 2:4677964/140‑1 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCata < 1:3294431/140‑1 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCata < 1:5118308/140‑1 (MQ=255) cGATGGACATCATCCCCCATGGTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCata < 2:214468/140‑1 (MQ=255) gACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGttt < 1:1725635/140‑1 (MQ=255) atcatcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTa < 1:4493289/140‑1 (MQ=255) tcatcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTAt < 1:4276181/140‑1 (MQ=255) catcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg < 1:4624246/140‑1 (MQ=255) catcCCCCATTTTGGGGACTGCCCCCCCGGTAGACGATCCTGCCCAAGAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATGGTAGAGTATCCCCATATGTTTCtgtg > 2:3785589/1‑140 (MQ=255) atcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATgg > 1:1712396/1‑140 (MQ=255) cccccATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGa < 1:4177497/140‑1 (MQ=255) cccATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATc < 1:3907348/140‑1 (MQ=255) tttGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATCGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGCGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGa < 2:3388727/140‑1 (MQ=255) tgGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATg < 2:161150/140‑1 (MQ=255) aCTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACa > 1:220683/1‑140 (MQ=255) cTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACaa < 1:5055835/140‑1 (MQ=255) tGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑CC‑CACTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAAt < 1:3338861/140‑1 (MQ=255) gCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATc < 2:2369490/140‑1 (MQ=255) tcccgcGGTGGAGGATGCTGCCCTGTAGGTGGAGTGCCC‑C‑CGTTTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCGCCATATGTTTCTATGGGATCCAGGAAATGACAATCAg < 2:2517001/139‑1 (MQ=255) gTAGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTAc > 1:750320/1‑140 (MQ=255) aGACGATCCTGCCCTATATTTGGCGTGCCC‑C‑CTATTCATTTGGCTAAATTTAGCAAATCAATACACTTCTGGGGGGTATTGTTGTAAAGTTTCCCCATATGTTTCTATGGGATCCAGTAAATGACAATCAGGAGTTACaa < 2:2631514/140‑1 (MQ=255) aGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaa > 2:886936/1‑140 (MQ=255) aGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaa > 1:3966191/1‑140 (MQ=255) aGACGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaa < 1:5284226/140‑1 (MQ=255) aCGATCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaaaa > 2:2998820/1‑140 (MQ=255) tCCTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCTGGAGTTACAAAAACtt > 1:4355298/1‑140 (MQ=255) ccTGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTa > 1:1922604/1‑140 (MQ=255) tGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTaaa > 2:202391/1‑140 (MQ=255) tGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTaaa > 2:1189233/1‑140 (MQ=255) tGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTaaa > 1:362325/1‑140 (MQ=255) tGCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACAATTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCAAGGAAATGACAAAAAGGAGTTACAAAAACTTaaa > 2:2825768/1‑140 (MQ=255) gCCCTATAGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAAt < 2:3725525/140‑1 (MQ=255) taGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGTGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:3590902/140‑1 (MQ=255) taGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 2:2156405/1‑140 (MQ=255) taGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 1:3392650/1‑140 (MQ=255) taGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 2:2678782/140‑1 (MQ=255) taGTTGGAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:622366/140‑1 (MQ=255) ggAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGc > 2:259197/1‑140 (MQ=255) ggAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGc > 1:2119413/1‑140 (MQ=255) ggAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGc > 2:3841767/1‑140 (MQ=255) ggAGTGCCC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGAGCCAGGAAATGGCAATCAGGAGCTACAAAAACTTAAATCTGGTCAGGGc > 1:2797891/1‑140 (MQ=255) | CTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑CC‑C‑CTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCA > NZ_CP025268/2769711‑2769982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |