Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 3,743,290 +C intergenic (‑66/‑116) yiaJ ← / → galK IclR family transcriptional regulator YiaJ/galactokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252683,743,2891.C98.1% 350.7 / ‑0.2 107intergenic (‑65/‑117)yiaJ/galKIclR family transcriptional regulator YiaJ/galactokinase
Reads supporting (aligned to +/- strand):  ref base . (2/0);  new base C (42/63);  total (44/63)
Fisher's exact test for biased strand distribution p-value = 1.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 112 total aligned reads displayed.

GGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAA  >  NZ_CP025268/3743155‑3743420
                                                                                                                                       |                                                                                                                                    
ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAccaat                                                                                                                                 <  2:3655390/140‑5 (MQ=255)
ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAccaat                                                                                                                                 <  1:4126085/140‑5 (MQ=255)
ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAccaat                                                                                                                                 <  1:2780634/140‑5 (MQ=255)
 gCTTCCGGCTGGACGCTCTTTTTCCTGCGCCCTCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAccaatt                                                                                                                                <  2:4800042/140‑6 (MQ=255)
   ttCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGa                                                                                                                              <  2:3853957/140‑1 (MQ=255)
     ccGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCCTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGAtt                                                                                                                            >  2:2598167/1‑140 (MQ=255)
       ggCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATCTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTTAtttt                                                                                                                          >  2:2444204/1‑140 (MQ=255)
          tGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTAt                                                                                                                       <  1:4087996/140‑1 (MQ=255)
          tGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTAt                                                                                                                       <  1:4922263/140‑1 (MQ=255)
           ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATg                                                                                                                      >  1:1051179/1‑140 (MQ=255)
           ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATg                                                                                                                      >  1:2650835/1‑140 (MQ=255)
                ctctTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCttt                                                                                                                 <  1:2000527/140‑1 (MQ=255)
                ctctTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCttt                                                                                                                 <  1:4585270/140‑1 (MQ=255)
                 tctTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCtttt                                                                                                                >  1:76654/1‑140 (MQ=255)
                 tctTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCtttt                                                                                                                >  2:121582/1‑140 (MQ=255)
                    ttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGaa                                                                                                             <  1:4700410/140‑1 (MQ=255)
                    ttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGaa                                                                                                             <  2:4509907/140‑1 (MQ=255)
                      ttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAAt                                                                                                           >  1:5273416/1‑140 (MQ=255)
                      ttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAAt                                                                                                           <  1:3805654/140‑1 (MQ=255)
                       tCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAAtt                                                                                                          <  2:1320312/140‑1 (MQ=255)
                         cTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtca                                                                                                        <  2:2137334/140‑1 (MQ=255)
                          tGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAATTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcat                                                                                                       <  2:4725331/140‑1 (MQ=255)
                           gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatc                                                                                                      <  1:2262988/140‑1 (MQ=255)
                           gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatc                                                                                                      >  1:1043969/1‑140 (MQ=255)
                           gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatc                                                                                                      >  2:3004743/1‑140 (MQ=255)
                           gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatc                                                                                                      >  1:2584491/1‑140 (MQ=255)
                            cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatca                                                                                                     <  1:2012919/140‑1 (MQ=255)
                            cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatca                                                                                                     <  1:2013862/140‑1 (MQ=255)
                            cgcCATCTCGTTCTCTTTGTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatca                                                                                                     <  2:4065242/140‑1 (MQ=255)
                             gcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATCACCAATTGATTTTTATGTCTTTTGAAATTCATCaa                                                                                                    <  1:3925224/140‑1 (MQ=255)
                             gcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCaa                                                                                                    <  1:3334651/140‑1 (MQ=255)
                             gcCATCTCGTTCTCTTGTTTTCCCATCACTTCATTCCCCACTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGTCGTAGATCACGCTCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCaa                                                                                                    <  2:4429373/140‑1 (MQ=255)
                                      ttCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgc                                                                                           >  1:3153279‑M1/1‑133 (MQ=255)
                                      ttCTCTTTTTTTCCCATAACTTCTTTCCCCATTTTGTCACGACCTGATAGTAAAGCAAAGTGTGCCGTAGTACACGATCTCAACAGATAATTTATAACAAATTGCTTTTTAGGTCTTTTGAAATTCATCAATcagattgc                                                                                           >  2:3877444/1‑133 (MQ=255)
                                       tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  2:4035346‑M1/140‑9 (MQ=255)
                                       tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  2:2780701‑M1/140‑9 (MQ=255)
                                       tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  1:4623346‑M1/140‑9 (MQ=255)
                                       tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  2:2455713‑M1/140‑9 (MQ=255)
                                       tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  1:1486‑M1/140‑9 (MQ=255)
                                       tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  2:3502756‑M1/140‑9 (MQ=255)
                                       tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  1:3608950‑M1/140‑9 (MQ=255)
                                       tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTACTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  2:4926487‑M1/140‑9 (MQ=255)
                                       tctcTTTTTTTCCCATCACTGCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTCTAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  2:3504064‑M1/140‑9 (MQ=255)
                                       tcccttttTTTCCCATCCCTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATATCGACAGATAATTGATAACCAGTTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  2:2096446‑M1/137‑9 (MQ=255)
                                       cctcttTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                          <  1:2135311‑M1/139‑9 (MQ=255)
                                           tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCGCGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                                      >  1:3356912‑M1/1‑128 (MQ=255)
                                               tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa                                                                                  <  2:1725262‑M1/140‑17 (MQ=255)
                                               tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa                                                                                  <  2:1348575‑M1/140‑17 (MQ=255)
                                               tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa                                                                                  <  2:3941429‑M1/140‑17 (MQ=255)
                                               tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa                                                                                  <  2:524106‑M1/140‑17 (MQ=255)
                                                 tCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaa                                                                                <  2:2556966‑M1/140‑19 (MQ=255)
                                                     aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtga                                                                            >  2:3989450‑M1/1‑118 (MQ=255)
                                                     aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtga                                                                            >  2:1791851‑M1/1‑118 (MQ=255)
                                                      tcccttctttccCCATTCTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                           <  2:4425620‑M1/137‑24 (MQ=255)
                                                      tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                           <  1:4118425‑M1/140‑24 (MQ=255)
                                                      tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                           <  1:4623904‑M1/140‑24 (MQ=255)
                                                      tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                           <  1:229740‑M1/140‑24 (MQ=255)
                                                      tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                           <  2:1989418‑M1/140‑24 (MQ=255)
                                                      tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                           <  1:426781‑M1/140‑24 (MQ=255)
                                                      tCACTTCTTTCCACATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                           <  2:4327834‑M1/140‑24 (MQ=255)
                                                           tcttTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgata                                                                      <  2:2370663‑M1/140‑29 (MQ=255)
                                                            cttTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatat                                                                     >  2:1844489‑M1/1‑111 (MQ=255)
                                                               tCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACTATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatt                                                                  >  2:4139494‑M1/1‑108 (MQ=255)
                                                                 cccATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg                                                                >  1:858764‑M1/1‑106 (MQ=255)
                                                                 cccATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg                                                                >  1:858462‑M1/1‑106 (MQ=255)
                                                                     ttttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaat                                                            <  2:344775‑M1/140‑39 (MQ=255)
                                                                      tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc                                                           <  1:4293983‑M1/140‑40 (MQ=255)
                                                                      tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc                                                           >  2:4293983‑M1/1‑101 (MQ=255)
                                                                      tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc                                                           <  1:467125‑M1/140‑40 (MQ=255)
                                                                      tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc                                                           >  2:1956778‑M1/1‑101 (MQ=255)
                                                                               tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc                                                  >  1:3612241‑M1/1‑92 (MQ=255)
                                                                               tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgctaaaaagtgatcgatatatttcaaatcaagtttcgc                                                  >  2:5336774‑M1/1‑92 (MQ=255)
                                                                                        tAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaa                                         >  1:2032332‑M1/1‑83 (MQ=255)
                                                                                         aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat                                        >  2:4376133‑M1/1‑82 (MQ=255)
                                                                                          gcgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCacattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatt                                       >  2:4020398‑M1/1‑81 (MQ=255)
                                                                                          gcgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACGAATTGATTTTTATGTCTTTTGAAATTCATCCATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatt                                       >  2:4714564‑M1/1‑81 (MQ=255)
                                                                                           cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt                                      >  2:1183337‑M1/1‑80 (MQ=255)
                                                                                             cAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatttta                                    >  2:576606‑M1/1‑78 (MQ=255)
                                                                                                  tgtgCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagcca                               >  1:27654‑M1/1‑73 (MQ=255)
                                                                                                    tgCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa                             >  2:1041663‑M1/1‑71 (MQ=255)
                                                                                                     gCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaa                            >  1:2337799‑M1/1‑70 (MQ=255)
                                                                                                         tAGTTCACGATCTCGACAGGTAATTTATAACCAAACGATTTTTATGTCTTGTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcagattgaaattttaagccaaaaaagc                        >  2:1123396‑M1/1‑66 (MQ=255)
                                                                                                          aGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg                       <  2:2209581‑M1/140‑76 (MQ=255)
                                                                                                            ttCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                     >  1:5249339‑M1/1‑63 (MQ=255)
                                                                                                            ttCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                     >  1:3579401‑M1/1‑63 (MQ=255)
                                                                                                            ttCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                     >  2:4099035‑M1/1‑63 (MQ=255)
                                                                                                            ttCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                     >  2:2776022‑M1/1‑63 (MQ=255)
                                                                                                              cACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatca                   >  1:4932749‑M1/1‑61 (MQ=255)
                                                                                                               aCGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaa                  <  1:4622266‑M1/140‑81 (MQ=255)
                                                                                                                  aTCTCGCCAGATAATTTATAACCGATTGATTTTTATGTCTTTTGAAATTCATCCATCagattgccttgttaaaaagtcatcgatatacttgaaatcaagtttcacatattgaaattttaagccaaaaaagcgatcaaaaa               <  2:4745447‑M1/140‑84 (MQ=255)
                                                                                                                      cGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca           >  2:2206089‑M1/1‑53 (MQ=255)
                                                                                                                      cGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca           >  2:3126634‑M1/1‑53 (MQ=255)
                                                                                                                        aCAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaag         <  2:2584491‑M1/140‑90 (MQ=255)
                                                                                                                        aCAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAAGAagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgaatattgaaattttaagccaaaaaagcgatcaaaaaaacaag         <  2:4854600‑M1/140‑90 (MQ=255)
                                                                                                                         tagATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaagg        <  1:4728471‑M1/139‑91 (MQ=255)
                                                                                                                         cAGATAATTTATAACCAATTGCTTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaacagcgatcaaaaaaacaagg        <  1:820447‑M1/140‑91 (MQ=255)
                                                                                                                         cAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaagg        <  1:1317487‑M1/140‑91 (MQ=255)
                                                                                                                              aaTTTGTAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaacgtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcc   <  2:4709640‑M1/140‑96 (MQ=255)
                                                                                                                              aaTTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcc   <  1:977112‑M1/140‑96 (MQ=255)
                                                                                                                               aTTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcct  <  1:3825325‑M1/140‑97 (MQ=255)
                                                                                                                                       |                                                                                                                                    
GGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAA  >  NZ_CP025268/3743155‑3743420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: