| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 4,492,041 | +ATACGTGTAAT | intergenic (‑52/+15) | yjgR ← / ← idnR | DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 4492041 | 4 (0.010) | 297 (1.040) +ATACGTGTAAT |
91/254 | 0.2 | 98.8% | intergenic (‑52/+15) | yjgR/idnR | DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR |
| ? | NZ_CP025268 | 4492042 = | 4 (0.010) | intergenic (‑53/+14) | yjgR/idnR | DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR | |||||
Only 100 of 325 total aligned reads displayed.
GGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGA‑‑‑‑‑‑‑‑‑‑‑GAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTA > NZ_CP025268/4491903‑4492179 | ggTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAa < 1:4257465‑M1/140‑2 (MQ=255)ggTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAa < 1:2136061‑M1/140‑2 (MQ=255) gTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAat < 2:578908‑M1/140‑3 (MQ=255) aTGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatga > 1:717267‑M1/1‑127 (MQ=255) tGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaa < 1:5062975‑M1/140‑15 (MQ=255) gACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaag < 1:4083971‑M1/140‑16 (MQ=255) gACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaag < 1:3566467‑M1/140‑16 (MQ=255) aCGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAataggtgtaatgaaga < 2:5294118‑M1/140‑17 (MQ=255) aCGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaaga < 1:3943540‑M1/140‑17 (MQ=255) ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaa > 1:535101‑M1/1‑120 (MQ=255) ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaa > 2:515466‑M1/1‑120 (MQ=255) ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaa < 1:1447849‑M1/140‑21 (MQ=255) ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaa > 1:1348172‑M1/1‑120 (MQ=255) aGCCGTCCCCGGCACTAACAACAGTTCTGTGTCCCGCGTGCGGGCAATTAACAGGGGTTCCCTCATGAGATATCCCCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑CGAatacgtgtaatgaagagaaaat < 2:1637145‑M1/140‑23 (MQ=255) aGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaat < 2:46479‑M1/140‑23 (MQ=255) aGCCAGTCCCGGCAGTAACAACAGTTTTGTGTCCGGGGTGCGTGCAATTCACAGGGGTTCCCTCATGAGATAGCCTCCAGTTCCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtttaatcaagagaaaat < 2:1753514‑M1/140‑23 (MQ=255) gCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaata > 1:1672498‑M1/1‑117 (MQ=255) tCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataaccta > 1:2215460‑M1/1‑112 (MQ=255) tCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataaccta > 2:1279320‑M1/1‑112 (MQ=255) tCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaagaaccta > 2:315783‑M1/1‑112 (MQ=255) ccGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaa < 1:2913388‑M1/140‑31 (MQ=255) ccGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATAGCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaa < 2:2102978‑M1/140‑31 (MQ=255) tAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtttt > 2:1935893‑M1/1‑103 (MQ=255) tAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgtt > 1:5013624‑M1/1‑103 (MQ=255) tAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgtt > 2:1692818‑M1/1‑103 (MQ=255) aaaaCAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgc < 1:3304106‑M1/140‑40 (MQ=255) gTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgat < 1:4600527‑M1/140‑46 (MQ=255) ttCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgata < 1:207743‑M1/140‑47 (MQ=255) ttCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgata < 1:1233647‑M1/140‑47 (MQ=255) tCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCTAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataa > 2:1719756‑M1/1‑93 (MQ=255) tCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataa > 1:577300‑M1/1‑93 (MQ=255) tCTGTGTCCGGCGTGCGGGAAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataa < 1:3089487‑M1/140‑48 (MQ=255) tgtCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatct > 1:1104629‑M1/1‑89 (MQ=255) cGTGCGGGCAATTAACAGGGGTTCAGTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgataccc < 1:4865945‑M1/140‑59 (MQ=255) cGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgataccc < 1:2067768‑M1/140‑59 (MQ=255) gTGCGGGCACTTAACAGGGGTTCACGCATGAGATATCGTCCAGTGTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑CGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccg < 2:541110‑M1/140‑60 (MQ=255) gTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccg < 2:3319071‑M1/140‑60 (MQ=255) gcgcgcAATTAACAGGTGTTCACTCATGATATATCCACCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaatagaaaataacctaaagcgtgttgccgtgataaatctgatacccgag < 2:4407472‑M1/140‑62 (MQ=255) gCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgag < 1:5328120‑M1/140‑62 (MQ=255) gggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggt < 1:4040529‑M1/140‑64 (MQ=255) gggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggt > 2:4455121‑M1/1‑77 (MQ=255) gggCAATGAACAGGGGTTCATTCATGAGATATTCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGAAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcggggtgccgtgataaatctgatacccgaggg < 2:135892‑M1/140‑64 (MQ=255) gCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtca > 1:3611100‑M1/1‑75 (MQ=255) cAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 1:1019996‑M1/140‑67 (MQ=255) cAATTAACAGGGGTTCACTCATGAGATAGCCTCCAGTTCCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGGatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 2:2313125‑M1/140‑67 (MQ=255) aaTTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaac < 2:663253‑M1/140‑68 (MQ=255) aaTTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaac < 2:4105165‑M1/140‑68 (MQ=255) ttAACAGGGGTTCCCTCATGAGAGATCCTCCAGTTTCCTGCCTGGAGTATTGGCCACGTCCGGCAAAGGGAATACGGGTAAA‑‑‑‑‑‑‑‑‑‑‑GAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAGATCTGATAACCGAGGTCAACAg < 2:1204520/140‑1 (MQ=255) cAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt < 2:2886752‑M1/140‑74 (MQ=255) cAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtaataaatctgatacccgaggtcaacagtgtt < 2:340964‑M1/140‑74 (MQ=255) ggggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgt > 2:1535087‑M1/1‑65 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggtt > 1:2478263‑M1/1‑61 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggtt > 2:1153010‑M1/1‑61 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggtt > 2:422562‑M1/1‑61 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgt > 1:462807‑M1/1‑59 (MQ=255) aTGAGATCTCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCTGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgtttccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcg < 2:2372183‑M1/140‑87 (MQ=255) aTGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcg > 1:3722560‑M1/1‑54 (MQ=255) gagaTATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgtt > 2:5232773‑M1/1‑52 (MQ=255) agaTATCCGCCAGTTTCCTGCCTGTAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑GGAATACGTGTAATGAAGAGAAAATAACATAAAGCGTGTTTCAGTGAGAAATCTTGTACCCGAGAGCAAGTGTGTTGTGTGTGTGATCGTTa > 2:899340/1‑140 (MQ=255) atatCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAat > 1:895340‑M1/1‑49 (MQ=255) atCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttt > 2:1055750‑M1/1‑47 (MQ=255) atCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttt > 1:2766774‑M1/1‑47 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt > 2:2291083‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt > 1:3904374‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt > 2:4342294‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt > 2:3283865‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtggtgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt > 1:4415326‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAAAGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt > 2:3478031‑M1/1‑46 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctcaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaa > 2:4952642‑M1/1‑44 (MQ=255) cAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattt > 1:3552635‑M1/1‑41 (MQ=255) gTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttg < 2:5067918‑M1/140‑102 (MQ=255) gTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttg > 1:4696498‑M1/1‑39 (MQ=255) ctgcctgGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcag < 2:4014295‑M1/140‑107 (MQ=255) tgcctgGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacag > 1:2509073‑M1/1‑33 (MQ=255) tgcctgGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacag < 2:2509073‑M1/102‑70 (MQ=255) cctgGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaa > 1:282805‑M1/1‑31 (MQ=255) taGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggc > 2:3753884‑M1/1‑22 (MQ=255) taGGCAAAGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtggaatgaagagaaaataaccgaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgctcgttatttttaattttgctcagcaacatttgggc > 2:4748294‑M1/1‑22 (MQ=255) aGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg > 1:969803‑M1/1‑21 (MQ=255) aGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg > 1:472040‑M1/1‑21 (MQ=255) aCGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccat > 1:117467‑M1/1‑16 (MQ=255) aCGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccat > 2:818896‑M1/1‑16 (MQ=255) aCGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccat > 2:1998869‑M1/1‑16 (MQ=255) aCGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccat > 2:2165242‑M1/1‑16 (MQ=255) aCGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccat > 1:430370‑M1/1‑16 (MQ=255) aCGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttatgatcgttatttttaattttgctcagcaacattggggcggccat > 2:2565951‑M1/1‑16 (MQ=255) aCGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagagtgtggccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgatcagcaacatttgggcggccat > 2:2953140‑M1/1‑16 (MQ=255) cGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgctcgttatttttaattttgctcagcaacatttgggcggccatc > 2:4564898‑M1/1‑15 (MQ=255) cGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatc > 1:1837689‑M1/1‑15 (MQ=255) gTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatcc > 2:270459‑M1/1‑14 (MQ=255) gTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatcc > 1:2701776‑M1/1‑14 (MQ=255) gTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatcc > 1:2649884‑M1/1‑14 (MQ=255) gTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtaatcgttatttttaattgtgctcagcaacatttgggcggcgatcc > 1:2379253‑M1/1‑14 (MQ=255) ggCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgacc < 2:2434796‑M1/140‑131 (MQ=255) ggCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgacc < 1:515466‑M1/140‑131 (MQ=255) ggCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgacc < 1:2310386‑M1/140‑131 (MQ=255) ggCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgacc < 2:3556831‑M1/140‑131 (MQ=255) cAAAG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataaccgaaagcgtgttgccgtgataaatctgtgacccgaggtcaacagggttgtgggtgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaa < 2:4053828‑M1/140‑133 (MQ=255) aaG‑‑‑‑‑‑‑‑‑‑‑AGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaata < 1:3250107‑M1/140‑135 (MQ=255) aatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaaa < 1:3461221‑M1/140‑140 (MQ=255) | GGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGA‑‑‑‑‑‑‑‑‑‑‑GAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTA > NZ_CP025268/4491903‑4492179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |