BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	= 339139	339 (1.090)	136 (0.450)	29/266	4.8	31.2%	coding (296/297 nt)	CXP41_RS01780	protein YahH
*	?	NZ_CP025268	3152974 =	273 (0.910)	136 (0.450)	29/266	4.8	31.2%	intergenic (+124/+148)	yghA/exbD	NADP(+)‑dependent aldehyde reductase/TonB system transport protein ExbD
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 283 total aligned reads displayed.

CGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGG  >  NZ_CP025268/3152835‑3153111

cgAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAg                                                                                                                                           >  2:5207803/1‑140 (MQ=255)

cgAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAg                                                                                                                                           <  1:3542775/140‑1 (MQ=255)

cgAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAg                                                                                                                                           >  1:5248680/1‑140 (MQ=255)

  ggCATTCAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCACTGTGTATTCTCGCTTACCTGATGTGGCGAAACCGCCGTATCCGCCTACAAACGCATGAAGATTCAACAGGTTGCAATAGATTTTGTAGGc                                                                                                                                         <  2:5226150/139‑1 (MQ=37)

  aGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGc                                                                                                                                         >  2:213191/1‑140 (MQ=255)

  aGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGc                                                                                                                                         <  2:689267/140‑1 (MQ=255)

  aGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGc                                                                                                                                         >  1:2643940/1‑140 (MQ=255)

  aGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGc                                                                                                                                         <  2:4417349/140‑1 (MQ=255)

  aGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTGTGTAGGc                                                                                                                                         <  1:3003064/140‑1 (MQ=255)

  aGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAAGAGATTTTGTAGGc                                                                                                                                         >  2:4652319/1‑140 (MQ=255)

  aGCATTTAGGTTAAAAAAATGCCCGGTTGGGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGCAGGc                                                                                                                                         >  2:3528317/1‑140 (MQ=255)

       ttAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAACCGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGAt                                                                                                                                    <  1:2362874/140‑1 (MQ=255)

       ttAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGAt                                                                                                                                    <  1:4448500/140‑1 (MQ=255)

          ggTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAg                                                                                                                                 <  2:775243/140‑1 (MQ=255)

            ttAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGCTTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCg                                                                                                                               >  2:2458999/1‑140 (MQ=255)

                aaaaaTGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAgc                                                                                                                           <  2:4850698/140‑1 (MQ=255)

                   aaTGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCa                                                                                                                        <  1:899711/140‑1 (MQ=255)

                    aTGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATCTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCAt                                                                                                                       <  1:4781079/140‑1 (MQ=255)

                     tGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATc                                                                                                                      <  2:3407263/140‑1 (MQ=255)

                     tGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATc                                                                                                                      <  1:1701337/140‑1 (MQ=255)

                      gCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACTCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGTCCTGATAAGCGTAGCGCATCa                                                                                                                     >  2:2336187/1‑140 (MQ=255)

                       cccGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAg                                                                                                                    <  2:835910/140‑1 (MQ=255)

                              gtgAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGa                                                                                                             <  1:3930258/140‑1 (MQ=255)

                              gtgAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTCATAAGCGTAGCGCATCAGGCATTGa                                                                                                             <  2:4792144/140‑1 (MQ=255)

                               tgAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAg                                                                                                            <  2:2301145/140‑1 (MQ=255)

                               tgAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAg                                                                                                            <  2:3053437/140‑1 (MQ=255)

                               tgAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAg                                                                                                            <  2:3723371/140‑1 (MQ=255)

                               tgAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAg                                                                                                            <  1:4544200/140‑1 (MQ=255)

                               tgAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAg                                                                                                            <  1:1091252/140‑1 (MQ=255)

                               tgAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAg                                                                                                            <  1:4328426/140‑1 (MQ=255)

                                gAAAAGCAACCGGGCATCATTGTGAATCCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGc                                                                                                           <  2:4307926/140‑1 (MQ=255)

                                    aGCAACCGGGCATCATTGTGATTGCACTCTTACCTGATGTGGCGAAAACCCCTTATCCGCCTACAAACGCATGAATATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCGCCt                                                                                                       <  2:3883397/140‑1 (MQ=25)

                                    aGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCt                                                                                                       <  2:3886605/140‑1 (MQ=255)

                                      cAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTaa                                                                                                     >  1:2059188/1‑140 (MQ=255)

                                         ccGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGc                                                                                                  <  1:5182832/140‑1 (MQ=255)

                                              catcatTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTACCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAATCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGAt                                                                                             <  2:4614827/140‑1 (MQ=255)

                                                tcatTGTGAATTCACTCTTACCTGATGAGGCGAAAACGCCTTATCCGCGTACAAACGCATGAAGATTCAACATGTTGCAATAGCTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAGTGCCGGATGc                                                                                           >  2:3924798/1‑140 (MQ=255)

                                                 catTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGGATCAGGCATTGAGCACCTAATGCCGGATGcg                                                                                          <  2:4074031/140‑1 (MQ=255)

                                                      tgAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTg                                                                                     >  1:3571385/1‑140 (MQ=255)

                                                           tCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGc                                                                                <  1:2530598/140‑1 (MQ=255)

                                                             aCTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCt                                                                              >  1:2180980/1‑140 (MQ=255)

                                                             aCTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCt                                                                              >  2:3586916/1‑140 (MQ=255)

                                                                 ttACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATc                                                                          <  2:1125141/140‑1 (MQ=255)

                                                                 ttACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATc                                                                          <  2:1359571/140‑1 (MQ=255)

                                                                 ttACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATc                                                                          <  1:4395140/140‑1 (MQ=255)

                                                                 ttACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATc                                                                          <  1:1585172/140‑1 (MQ=255)

                                                                 ttACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATGTTGTAGGCCTGATAAGCGGAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTCATc                                                                          <  2:1504485/140‑1 (MQ=255)

                                                                  tACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATcc                                                                         >  1:4406745/1‑140 (MQ=255)

                                                                  tACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATcc                                                                         >  2:1566768/1‑140 (MQ=255)

                                                                       gATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCt                                                                    >  1:5269381/1‑140 (MQ=255)

                                                                        aTGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTa                                                                   >  2:1485482/1‑140 (MQ=255)

                                                                         tgtgGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCGAc                                                                  >  2:3381095/1‑140 (MQ=255)

                                                                         tgtgGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAAGAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTAc                                                                  >  1:3678508/1‑140 (MQ=255)

                                                                          gtgGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACa                                                                 <  1:2197978/140‑1 (MQ=255)

                                                                            ggCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACaaa                                                               <  1:4068169/140‑1 (MQ=255)

                                                                             gCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAAc                                                              >  2:2334537/1‑140 (MQ=255)

                                                                             gCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAAc                                                              >  2:5341397/1‑140 (MQ=255)

                                                                                 aaaCGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCAc                                                          <  2:3954920/140‑1 (MQ=255)

                                                                                  aaCGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACg                                                         <  2:1756486/140‑1 (MQ=255)

                                                                                  aaCGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACg                                                         <  2:5045739/140‑1 (MQ=255)

                                                                                   aCGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGa                                                        <  1:3945100/140‑1 (MQ=255)

                                                                                       cTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGTCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCGTATCCGGCCTACAAACACACGAAGAt                                                    >  1:1677643/1‑140 (MQ=255)

                                                                                       cTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGAt                                                    >  1:2887948/1‑140 (MQ=255)

                                                                                         tATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTGGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTc                                                  >  2:4703177/1‑140 (MQ=255)

                                                                                           tCCGACTACAAACGAATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGAGTAGCGCATCAGGCATTGAGCACCTAATGCCGAATGCGTCGTGAACGCCTTATACGGCCTACAAACGAACGAAGATTCaa                                                <  1:1153453/140‑1 (MQ=37)

                                                                                               ccTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATg                                            <  2:1713968/140‑1 (MQ=255)

                                                                                               ccTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATg                                            <  1:1924632/140‑1 (MQ=255)

                                                                                               ccTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATg                                            <  2:1942018/140‑1 (MQ=255)

                                                                                               ccTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATg                                            >  1:1650441/1‑140 (MQ=255)

                                                                                               ccTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATg                                            >  1:3310032/1‑140 (MQ=255)

                                                                                                     aaCGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCaa                                      <  1:1252352/140‑1 (MQ=255)

                                                                                                         cATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGa                                  <  2:1898830/140‑1 (MQ=255)

                                                                                                         cATGAAGATTCAACAGGTTGAAATAGATTTGGTAGGCCTGAGAAGCGTAGCGCATCAGGCATGGAGCACCAAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGa                                  <  2:3182035/140‑1 (MQ=37)

                                                                                                          aTGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGAt                                 >  1:781977/1‑140 (MQ=255)

                                                                                                          aTGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGAt                                 >  1:91464/1‑140 (MQ=255)

                                                                                                          aTGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGAt                                 >  2:4538457/1‑140 (MQ=255)

                                                                                                              aGATTCAACATGTTGCAATAGATTTTGTCGGCCTGATCAGCGTCGCGCATCAGGCATTGAGCACCTGATGCCGGATGAGTCGAGAACGCCTTATCCGGCCTACAAAAGCACGAAGATTCAACATGTTGCACTAGATTTTg                             <  1:648010/140‑1 (MQ=37)

                                                                                                              aGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGGCTTATCCGGCCTACAAACGCCCGAAGACTCAACATGTTGCAATAGATTTTg                             <  1:3186404/140‑1 (MQ=255)

                                                                                                              aGATTCAACATGTTGCAATAGAATTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTg                             <  2:4205847/140‑1 (MQ=255)

                                                                                                                aTTCAACATGTTGCAATAGATTTTGTAGGCGTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTa                           <  1:271703/140‑1 (MQ=255)

                                                                                                                aTTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTa                           <  2:4765463/140‑1 (MQ=255)

                                                                                                                 ttCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAg                          <  2:3792599/140‑1 (MQ=255)

                                                                                                                  tCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGa                                                                                                             <  1:1715882/56‑1 (MQ=255)

                                                                                                                       aTGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCtga                    <  2:1207943/140‑1 (MQ=255)

                                                                                                                        tGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCtgat                   <  1:208567/140‑1 (MQ=255)

                                                                                                                        tGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCtgat                   <  1:3082083/140‑1 (MQ=255)

                                                                                                                        tGTTGCAATAGATTTGTTAGGCGTGATAAGCGTCGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATGTTGTAGGCCtgat                   <  2:2715980/140‑1 (MQ=37)

                                                                                                                         gTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCtgatg                  >  2:1830461/1‑140 (MQ=255)

                                                                                                                           tGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCGACATGTTGCAATAGATTTTGTAGGCCTGATGAg                >  2:2942191/1‑140 (MQ=255)

                                                                                                                           tGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAg                >  1:1032735/1‑140 (MQ=255)

                                                                                                                            gCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGc               >  1:2220787/1‑140 (MQ=255)

                                                                                                                                   aTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCGCCTAATGCCGCATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCCACATGTTGCAATAGATTTTGTAGGCCTGAGGAGCGTAgcgc        >  1:57358/1‑140 (MQ=255)

                                                                                                                                   aTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAgcgc        >  1:4210916/1‑140 (MQ=255)

                                                                                                                                    ttttGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCa       >  2:5064081/1‑140 (MQ=255)

                                                                                                                                     ttttTAGGCCTGATAAGCGGAGCGCATCATGCATTCTGCAGCTAGTGCCGGATGCGTCGTGCACGCCTTATCCTGCCTCGAAACGCCCGAAGACTCAGCATCTTGCAATAGATTTTGTAGGCCTGATGACCTTTGCGCAt      >  2:1462483/1‑140 (MQ=19)

                                                                                                                                     tttGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCAt      >  1:3358048/1‑140 (MQ=255)

                                                                                                                                     tttGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCAAGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAACGCaa      >  2:4036154/1‑139 (MQ=255)

                                                                                                                                       tGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCa    >  1:4998945/1‑140 (MQ=255)

                                                                                                                                       tGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCa    >  1:850970/1‑140 (MQ=255)

                                                                                                                                         tAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAgg  <  1:3764983/140‑1 (MQ=255)

CGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGG  >  NZ_CP025268/3152835‑3153111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.