BRESEQ :: Evidence

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP025268	3424454–3424919	3425235–3424923	5–782	120 [117]	[112] 121	[rrf]–[CXP41_RS17880]	[rrf],[CXP41_RS17880]

Only 100 of 121 total aligned reads displayed.

CTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTT  >  NZ_CP025268/3425198‑3425375

ctctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCt                                         <  2:2815530/140‑1 (MQ=11)

 tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                        <  1:265059/140‑1 (MQ=31)

 tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                        <  2:2881473/140‑1 (MQ=31)

 tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACCGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                        <  2:4737601/140‑1 (MQ=14)

  ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                       >  1:4947458/1‑140 (MQ=32)

  ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                       >  1:1544006/1‑140 (MQ=32)

  ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                       >  1:3713651/1‑140 (MQ=32)

  ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                       >  1:820627/1‑140 (MQ=32)

  ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                       >  1:2048343/1‑140 (MQ=32)

  ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                       >  1:4054609/1‑140 (MQ=32)

     tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑Gcc                                   >  1:2842567/1‑140 (MQ=32)

     tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑Gcc                                   >  2:1249962/1‑140 (MQ=32)

     tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑Gcc                                   >  2:4385719/1‑140 (MQ=33)

     tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑Gcc                                   >  1:5202337/1‑140 (MQ=33)

     tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑Gcc                                   >  1:5202325/1‑140 (MQ=33)

      aggaggAGACCGCCCCAGTCACACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  1:2665766/140‑1 (MQ=18)

      aggaggAGACCGCCCCAGTCAACCTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  1:686253/140‑1 (MQ=17)

      aggaggAGACCGCCCCAGTCAAACTACCCACCCGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  2:2780738/140‑1 (MQ=18)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGTTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  2:341736/140‑1 (MQ=17)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  1:381155/140‑1 (MQ=33)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  1:4628695/140‑1 (MQ=33)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  1:4628794/140‑1 (MQ=33)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  2:1550334/140‑1 (MQ=33)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  2:1561173/140‑1 (MQ=33)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  1:5002084/140‑1 (MQ=33)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  1:1164991/140‑1 (MQ=33)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  2:602196/140‑1 (MQ=33)

      aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACGTCTAA‑GCCt                                  <  2:4996632/140‑1 (MQ=18)

      aggaggAGACCGCACCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  2:4591340/140‑1 (MQ=18)

      aggagcAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  1:5236315/140‑1 (MQ=18)

        gaggagACCGCCCCAGTCAAACTACCCACCAGACAATGTCCGCAA‑CCCGGACTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCATACTGGCGGCCACACTTCTAA‑GCCTcc                                >  2:1451703/1‑140 (MQ=255)

         aggagCCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTccc                               <  1:909424/140‑1 (MQ=18)

         aggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAC‑GCCTccc                               <  2:3358191/140‑1 (MQ=17)

         aggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTccc                               <  1:1424821/140‑1 (MQ=33)

         aggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTccc                               <  1:4913912/140‑1 (MQ=33)

         aggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTccc                               <  1:3189321/140‑1 (MQ=32)

           gcgaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTTCTCATGTCTAG‑GCCTccccc                             <  2:4606818/138‑3 (MQ=11)

           gagaCCGCCCCAGTCAAACTACCCCCCCGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:1959589/140‑1 (MQ=18)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCa                              >  2:1349081/1‑140 (MQ=17)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCTTCCCAc                             <  2:4740432/140‑1 (MQ=17)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  >  1:2592062/1‑135 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt                                  <  2:2592062/135‑1 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:1268150/140‑1 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             >  1:5306857/1‑140 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             >  2:1156856/1‑140 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  2:3143716/140‑1 (MQ=32)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             >  2:2727141/1‑140 (MQ=32)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             >  2:2727077/1‑140 (MQ=32)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:4827085/140‑1 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:4446390/140‑1 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             >  1:4335492/1‑140 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:1351029/140‑1 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:1959666/140‑1 (MQ=32)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:3131035/140‑1 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:1363336/140‑1 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:1658313/140‑1 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             <  1:2481363/140‑1 (MQ=33)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGGGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc                             >  2:1641856/1‑140 (MQ=17)

           gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCAGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGGATTTCAAGGTCGGCTCCCTGCAGACTGGCGTCCGCACTTCTAA‑GCCTCCAAc                             >  2:953160/1‑140 (MQ=11)

             gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGCTTACGGGTCAACGTTAGAACATCAAACATCAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTCCTAA‑GCCTCCCACCt                           >  2:4777177/1‑140 (MQ=12)

             gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAGACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTGCACACTTCTAT‑GCCTCCCACCt                           >  2:2179076/1‑140 (MQ=12)

             gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCt                           >  1:2463049/1‑140 (MQ=33)

             gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCt                           >  2:4381508/1‑140 (MQ=32)

             gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGACGTCCACACTTCTAA‑GCCTCCCACCt                           >  2:3784111/1‑140 (MQ=18)

             gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATGTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCt                           >  1:1957060/1‑140 (MQ=18)

              aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTa                          <  1:2885862/140‑1 (MQ=33)

              aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTa                          <  1:5159358/140‑1 (MQ=33)

              aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTa                          <  1:3713722/140‑1 (MQ=33)

                  ccccAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCt                      >  2:4105936/1‑140 (MQ=33)

                  ccccAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCt                      >  2:574005/1‑140 (MQ=33)

                   cccAGTCAAACTCCCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTa                     <  1:1700360/140‑1 (MQ=17)

                   cccAGTCAAACTACCCACCAGACACTGTCCGCCA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCCAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTa                     <  2:4691446/140‑1 (MQ=17)

                   cccAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTa                     <  2:1576860/140‑1 (MQ=32)

                   cccAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTa                     <  2:4222278/140‑1 (MQ=33)

                   cccAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGCTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTa                     <  1:2179076/140‑1 (MQ=18)

                   cacactCAAACTACCCACCAGACACTCTACGCAA‑ACCGGATTACGGGTCAACGTTAGAACATCAAACCTTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTa                     <  1:3024384/135‑1 (MQ=11)

                     cAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCTCACTTCTCA‑GCCTCCCACCTATCCTaca                   <  2:3094972/140‑1 (MQ=17)

                     cAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTaca                   <  1:2166603/140‑1 (MQ=32)

                       gTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACAATAAAGGGTGGTATTTCAAGGTCGGCTCCCTGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTAcaca                 >  2:3854262/1‑140 (MQ=17)

                        tCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACAt                <  1:4997245/140‑1 (MQ=33)

                        tCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACAt                >  1:4216765/1‑140 (MQ=33)

                         cAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATc               <  1:1918761/140‑1 (MQ=33)

                          aaaCTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCa              <  2:777309/140‑1 (MQ=33)

                          aaaCTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCa              <  1:1707488/140‑1 (MQ=33)

                            aCTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAg            >  2:130492/1‑140 (MQ=33)

                               aCCCACCAGACACTGGCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACGACTAA‑GCCTCCCCCCTATCCTACACATCAAGGCt         <  2:3065151/140‑1 (MQ=255)

                                cccACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTc        <  1:3897709/140‑1 (MQ=32)

                                cccACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTc        <  1:2182204/140‑1 (MQ=33)

                                 ccaccaGCGACCGTCCGCGT‑CCCAGATTAACGGGCAAAGTTAGAACATCAAACACTCCACGGTGGTGCTTCACGGTCGGCTCCACGCACACTGGCGTCGTCA‑TGATAACGCCTCCCCCCTGACCTACACATCAAGGCTCa       <  2:3776994/140‑1 (MQ=0)

                                 ccaccaGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCCCCTATCCTACACATCAAGGCTCa       <  2:1303915/140‑1 (MQ=17)

                                 ccaccaGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCa       <  1:3131038/140‑1 (MQ=33)

                                 ccaccaGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCa       >  2:291006/1‑140 (MQ=33)

                                 ccaccaGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCa       >  2:3517791/1‑140 (MQ=32)

                                  caccaGACACTGTCCGCAA‑CCCGGATTCCGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCaa      >  1:2626275/1‑140 (MQ=18)

                                  caccaGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCaa      >  1:3675118/1‑140 (MQ=33)

                                      aGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGtt  <  1:339593/140‑1 (MQ=33)

                                      aGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGtt  <  1:1507393/140‑1 (MQ=33)

                                      aGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGtt  <  2:4046363/140‑1 (MQ=33)

                                      aGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGtt  <  1:4070839/140‑1 (MQ=33)

                                      aGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACGTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGtt  <  2:3081442/140‑1 (MQ=17)

CTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAA‑CCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTT  >  NZ_CP025268/3425198‑3425375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`