BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	581,201	T→C	pseudogene (667/667 nt)	CXP41_RS03085 ←	class I SAM‑dependent methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	581,201	0	T	C	100.0%	1324.3 / NA	387	pseudogene (667/667 nt)	CXP41_RS03085	class I SAM‑dependent methyltransferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (183/204); total (183/204)

Only 100 of 387 total aligned reads displayed.

CGGGTGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTT‑GATGTTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCTTTCTGATTG  >  NZ_CP025268/581073‑581336

   gtgtTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTg                                                                                                                            <  1:3706531/140‑1 (MQ=255)

        gCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCg                                                                                                                       <  1:5012321/140‑1 (MQ=255)

           gAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGaa                                                                                                                    <  2:262041/140‑1 (MQ=255)

           gAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGaa                                                                                                                    <  1:4607240/140‑1 (MQ=255)

           gAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGaa                                                                                                                    <  2:498862/140‑1 (MQ=255)

           gAACCGTGTTGAGACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGaa                                                                                                                    <  1:1172749/140‑1 (MQ=255)

             aCCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGaaaa                                                                                                                  <  1:4395166/140‑1 (MQ=255)

             aCCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGaaaa                                                                                                                  <  1:3680676/140‑1 (MQ=255)

                gtgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACAt                                                                                                               <  1:4750829/140‑1 (MQ=255)

                gtgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACAt                                                                                                               <  2:1720563/140‑1 (MQ=255)

                gtgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACAt                                                                                                               <  1:74980/140‑1 (MQ=255)

                gtgtTGATACATCAACTGCACCTGACATTGAGTCGCCTACGAACCCTGCCAGGGAGTAATCATTGGGATTATGACGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGACGCGGAAAACAt                                                                                                               <  2:2944531/140‑1 (MQ=255)

                gtgtTCATCCATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAATATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACAt                                                                                                               <  2:4891434/140‑1 (MQ=255)

                 tgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGATGCGGAAAACAtt                                                                                                              >  2:3761902/1‑140 (MQ=255)

                 tgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACAtt                                                                                                              >  1:3354568/1‑140 (MQ=255)

                 tgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACAtt                                                                                                              >  2:1120624/1‑140 (MQ=255)

                 tgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACAtt                                                                                                              >  1:2679182/1‑140 (MQ=255)

                      aTACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATtactac                                                                                                         >  1:1980795/1‑140 (MQ=255)

                      aTACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATtactac                                                                                                         <  1:3981365/140‑1 (MQ=255)

                       tACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                        <  1:2278364/140‑1 (MQ=255)

                       tACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                        <  2:634730/140‑1 (MQ=255)

                       tACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                        <  2:3394246/140‑1 (MQ=255)

                       tACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                        <  2:1402074/140‑1 (MQ=255)

                       tACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGCGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                        <  1:4459732/140‑1 (MQ=255)

                       gaCATCAACTTCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATGGGGATTAGGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                        <  1:1784564/139‑1 (MQ=255)

                       gaCATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                        <  2:2614390/139‑1 (MQ=255)

                           tCAACTGCTCCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTAGTATTCTGCCGCAGCACGCCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGCCGCGGAAAACATTACTACAGTat                                                                                                    >  2:3194467/1‑139 (MQ=255)

                           tCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTAc                                                                                                    >  1:533913/1‑140 (MQ=255)

                           tCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTAc                                                                                                    >  1:4958515/1‑140 (MQ=255)

                           tCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTAc                                                                                                    >  1:161048/1‑140 (MQ=255)

                           tCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTAc                                                                                                    >  1:2190564/1‑140 (MQ=255)

                                  cACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGAGGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAAc                                                                                             >  1:4090480/1‑140 (MQ=255)

                                    ccTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCt                                                                                           >  1:1042398/1‑140 (MQ=255)

                                    ccTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCt                                                                                           >  2:2023050/1‑140 (MQ=255)

                                       gATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTgg                                                                                        >  1:107481/1‑140 (MQ=255)

                                            tGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTa                                                                                   >  1:1661697/1‑140 (MQ=255)

                                             gAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTaa                                                                                  <  1:1885603/140‑1 (MQ=255)

                                              aGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTCAc                                                                                 >  2:3640438/1‑140 (MQ=255)

                                              aGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAAc                                                                                 >  1:5098939/1‑140 (MQ=255)

                                              aGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAAc                                                                                 >  1:613349/1‑140 (MQ=255)

                                              aGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAAc                                                                                 >  2:3251019/1‑140 (MQ=255)

                                               gTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGaaaa                                                                                                                  <  1:2222348/106‑1 (MQ=255)

                                               gTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGaaaa                                                                                                                  >  2:2222334/1‑106 (MQ=255)

                                               gTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACa                                                                                >  2:683935/1‑140 (MQ=255)

                                               gTGGCCTACGAACCCCTTCAGGGAGTAATCAGTGGGATTATGCCGCAGCACGACTTAAGCGAGAACATGCTGC‑GGTTGGATGCGATTTTTTTCCTGAAGCGGAAAACATCACTACAGTACCTTGAACATTGGTTTTAACa                                                                                >  2:918454/1‑140 (MQ=255)

                                                tGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACAt                                                                               <  2:2679182/140‑1 (MQ=255)

                                                  gCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATtc                                                                             >  1:271291/1‑140 (MQ=255)

                                                   ccTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGCTGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATtct                                                                            >  1:1223714/1‑140 (MQ=255)

                                                   ccTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATtct                                                                            >  1:2490028/1‑140 (MQ=255)

                                                   ccTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAACCGGAAAACATTACTACAGTACCTTGAACCTTCGTTTTAACATtct                                                                            >  2:4622958/1‑140 (MQ=255)

                                                      aCGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGa                                                                         >  1:1553581/1‑140 (MQ=255)

                                                       cGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGaa                                                                        <  1:541421/140‑1 (MQ=255)

                                                        gAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGaaa                                                                       <  1:4199825/140‑1 (MQ=255)

                                                          aCCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATg                                                                     <  1:4537481/140‑1 (MQ=255)

                                                            ccTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGct                                                                   <  1:4918340/140‑1 (MQ=255)

                                                            ccTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGct                                                                   <  1:1491644/140‑1 (MQ=255)

                                                             cggTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCGGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTGGAACCTTGGTTTTAGCATTCTCGAAATGctc                                                                  >  1:2972896/3‑140 (MQ=255)

                                                              tGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                 <  2:3020223/140‑1 (MQ=255)

                                                              tGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                 <  2:4538006/140‑1 (MQ=255)

                                                              tGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                 <  2:4047961/140‑1 (MQ=255)

                                                              tGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                 <  1:945075/140‑1 (MQ=255)

                                                               gTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGaa                                                                                                                    <  1:3221801/88‑1 (MQ=255)

                                                               gTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTg                                                                >  1:2351899/1‑140 (MQ=255)

                                                                tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTga                                                               <  2:742478/140‑1 (MQ=255)

                                                                tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTga                                                               <  1:3084670/140‑1 (MQ=255)

                                                                tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTga                                                               <  2:2302510/140‑1 (MQ=255)

                                                                tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTga                                                               <  1:114659/140‑1 (MQ=255)

                                                                tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTga                                                               <  2:4111316/140‑1 (MQ=255)

                                                                tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTga                                                               <  2:3102798/140‑1 (MQ=255)

                                                                tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTCAACATTCTCGAAATGCTCTga                                                               <  1:4675218/140‑1 (MQ=255)

                                                                tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTGTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTga                                                               <  2:4763953/140‑1 (MQ=255)

                                                                tCAGGGAGTAATCATTACGCTTATGCCGCCGCACGTCTTACGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGCAAACATTACCACAGTACCTTGAACCTTGGTTATAACATCCTCGAAATGCCCTga                                                               <  2:4689448/140‑1 (MQ=255)

                                                                      aGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGGTG‑GATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGtat                                                         >  2:2143424/1‑140 (MQ=255)

                                                                      aGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGtat                                                         >  2:5219317/1‑140 (MQ=255)

                                                                          aTCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATAtgt                                                     >  2:4023984/1‑140 (MQ=255)

                                                                          aTCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATAtgt                                                     >  1:4831708/1‑140 (MQ=255)

                                                                             aTTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGtt                                                  <  2:2405641/140‑1 (MQ=255)

                                                                                gggATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAg                                               >  1:1200616/1‑140 (MQ=255)

                                                                                gggATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAg                                               >  2:1747892/1‑140 (MQ=255)

                                                                                 ggATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGct                                                                   <  1:3506101/119‑1 (MQ=255)

                                                                                 ggATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGct                                                                   >  2:3506332/1‑119 (MQ=255)

                                                                                  gATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGct                                                                   >  2:322635/1‑118 (MQ=255)

                                                                                     tATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCcttc                                          >  1:5282518/1‑140 (MQ=255)

                                                                                     tATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCcttc                                          >  2:2528925/1‑140 (MQ=255)

                                                                                       tGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCcttctt                                        >  2:4389195/1‑140 (MQ=255)

                                                                                       tGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCcttctt                                        >  1:3154727/1‑140 (MQ=255)

                                                                                        gCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCttcttc                                       <  1:2819066/140‑1 (MQ=255)

                                                                                            cagcaCGTCTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGaa                                   >  1:5204797/1‑140 (MQ=255)

                                                                                                    cTTAAGCAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTtgt                           >  1:2922302/1‑140 (MQ=255)

                                                                                                          cAAGAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTACCATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGa                     <  2:1970310/140‑1 (MQ=255)

                                                                                                             gAACATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTtg                            >  2:5355622/1‑130 (MQ=255)

                                                                                                              aaCATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGtt                                                  <  2:1313289/107‑1 (MQ=255)

                                                                                                              aaCATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGtt                                                  >  1:1313289/1‑107 (MQ=255)

                                                                                                              aaCATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAg                 >  2:2859564/1‑140 (MQ=255)

                                                                                                              aaCATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAg                 >  2:18901/1‑140 (MQ=255)

                                                                                                              aaCATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAg                 >  2:1612609/1‑140 (MQ=255)

                                                                                                              aaCATGCTGC‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAg                 >  2:3143078/1‑140 (MQ=255)

                                                                                                                  tgctgc‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTaa                                                                                  <  2:1163534/71‑1 (MQ=255)

                                                                                                                      gc‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCttt         <  1:2624139/140‑1 (MQ=255)

                                                                                                                      gc‑GGTTGGATGCTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCttt         <  2:8283/140‑1 (MQ=255)

CGGGTGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGC‑GGTT‑GATGTTATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCTTTCTGATTG  >  NZ_CP025268/581073‑581336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`