BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	674,619	T→C	pseudogene (977/977 nt)	ybeQ ←	SEL1‑like repeat protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	674,619	0	T	C	99.7%	1229.5 / NA	366	pseudogene (977/977 nt)	ybeQ	SEL1‑like repeat protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (168/197); total (169/197)
Fisher's exact test for biased strand distribution p-value = 4.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 366 total aligned reads displayed.

CGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTT‑CC‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGG  >  NZ_CP025268/674482‑674753

cGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa                                                                                                                                        >  2:2790273/1‑140 (MQ=255)

cGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa                                                                                                                                        >  2:1398736/1‑140 (MQ=255)

cGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa                                                                                                                                        >  1:3737808/1‑140 (MQ=255)

 ggAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTAc                                                                                                                                       >  1:4403472/1‑140 (MQ=255)

    aGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGt                                                                                                                                    <  2:1030869/140‑1 (MQ=255)

        cTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAAt                                                                                                                                >  1:2026527/1‑140 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtc                                                                                                                        >  2:2198048/1‑140 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtc                                                                                                                        >  1:4675797/1‑140 (MQ=255)

                     cGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACg                                                                                                                   <  1:109777/140‑1 (MQ=255)

                           gtgGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑c                                                                                                            >  2:3976587/1‑140 (MQ=255)

                            tgGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑cc                                                                                                           <  2:4985193/140‑1 (MQ=255)

                                 aTGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑cctgact                                                                                                      <  2:4674306/140‑6 (MQ=255)

                                  tGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTg                                                                                                     >  1:4918862/1‑140 (MQ=255)

                                  tGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTg                                                                                                     >  2:4522033/1‑140 (MQ=255)

                                    aCCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTgactgac                                                                                                   <  2:5348540/140‑1 (MQ=255)

                                    aCCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATGTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAATCTCACGAATTT‑CCTgactgac                                                                                                   <  1:3984987/140‑1 (MQ=255)

                                         ttCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACAtctc                                                                                              >  1:574706/1‑140 (MQ=255)

                                         ttCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACAtctc                                                                                              >  1:356374/1‑140 (MQ=255)

                                            cAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTgg                                                                                           <  1:3822398/140‑1 (MQ=255)

                                              gagaCGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGtt                                                                                         >  1:1603233/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGGATTT‑CCTGACTGACATCTCTGTTGCCGGa                                                                                    >  1:3242832/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCgta                                                                                    >  1:4316668/1‑138 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCg                                                                                      <  1:2726524/138‑1 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:29708/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGa                                                                                    >  2:2007313/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:3642834/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:703927/1‑140 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAGTTCTCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  1:4787826/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  2:658193/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  1:2152105/140‑1 (MQ=255)

                                                                gTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTa                                                                       <  1:2479337/140‑1 (MQ=255)

                                                                 tAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTAc                                                                      >  1:1178636/1‑140 (MQ=255)

                                                                 tAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTAc                                                                      >  1:5215947/1‑140 (MQ=255)

                                                                 tAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTAc                                                                      >  2:3493907/1‑140 (MQ=255)

                                                                 tAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTAc                                                                      >  1:4109669/1‑140 (MQ=255)

                                                                   aTAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGTCCCTAGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGAAAGCTCTGGTTCCGGATGACTGAACTGTACGa                                                                    >  2:4688322/1‑140 (MQ=255)

                                                                   aTAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGa                                                                    <  2:3869499/140‑1 (MQ=255)

                                                                   aTAGTCTGATTTCGCACAGACATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCCC‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGa                                                                    <  2:1585810/140‑1 (MQ=255)

                                                                       tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACa                                                                <  2:4310535/140‑1 (MQ=255)

                                                                           aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTc                                                            >  1:1627631/1‑140 (MQ=255)

                                                                           aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTc                                                            >  2:1847520/1‑140 (MQ=255)

                                                                           aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTc                                                            >  2:4552008/1‑140 (MQ=255)

                                                                                 cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                      <  1:1720689/140‑1 (MQ=255)

                                                                                 cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                      >  2:1163463/1‑140 (MQ=255)

                                                                                        aTAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCgg                                               <  2:1745022/140‑1 (MQ=255)

                                                                                          aaaGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGgag                                             <  2:3621827/140‑1 (MQ=255)

                                                                                          aaaGAGAATATGGGCCCAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGgag                                             <  1:4357325/140‑1 (MQ=255)

                                                                                              agaATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCg                                         >  1:1112418/1‑140 (MQ=255)

                                                                                              agaATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCg                                         >  2:921301/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  1:1373333/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  1:945483/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  2:3427626/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  2:4226802/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  1:4996422/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  1:4716721/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  2:2726/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  2:5231616/1‑140 (MQ=255)

                                                                                                 atatGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                      <  1:2097184/140‑1 (MQ=255)

                                                                                                    tGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGt                                   <  2:810402/140‑1 (MQ=255)

                                                                                                    tGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGt                                   <  2:2538387/140‑1 (MQ=255)

                                                                                                      ggCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTct                                 <  2:3753160/140‑1 (MQ=255)

                                                                                                       gCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTctt                                >  1:3848494/1‑140 (MQ=255)

                                                                                                        ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                               <  2:356374/140‑1 (MQ=255)

                                                                                                        ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                               <  2:2111527/140‑1 (MQ=255)

                                                                                                        ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                               <  1:2537827/140‑1 (MQ=255)

                                                                                                          gAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcct                             >  2:684223/1‑140 (MQ=255)

                                                                                                           aaTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                            >  1:1842890/1‑140 (MQ=255)

                                                                                                            aTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttccttc                           >  1:5127650/1‑140 (MQ=255)

                                                                                                            aTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttccttc                           >  2:383464/1‑140 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                     <  2:1052063/140‑1 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                     <  1:804893/140‑1 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                     <  1:4221031/140‑1 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                     <  1:4552008/140‑1 (MQ=255)

                                                                                                                   tCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAg                    <  2:1334354/140‑1 (MQ=255)

                                                                                                                     cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGCCTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTg                  >  2:5168864/1‑140 (MQ=255)

                                                                                                                     cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGCGCCTGTCGGAGATCGACAGGGCTTCCTTCTCCGTAGTg                  >  2:168450/1‑140 (MQ=255)

                                                                                                                     cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCGGTAGTg                  <  1:3334205/140‑1 (MQ=255)

                                                                                                                     cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                     <  1:3130245/137‑1 (MQ=255)

                                                                                                                     cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTg                  <  2:1290721/140‑1 (MQ=255)

                                                                                                                      ccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGa                 >  1:2366123/1‑140 (MQ=255)

                                                                                                                       cGGCCCTTGTTTTTATCTCTACAGTACATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGAt                <  2:2971331/140‑1 (MQ=255)

                                                                                                                       cGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGAt                <  2:4472406/140‑1 (MQ=255)

                                                                                                                          cccTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACa             <  1:2567321/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgt       <  2:1131365/140‑2 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  1:182554/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  1:300748/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  1:5159833/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  1:1033781/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  1:291012/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  2:3026279/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  1:226909/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACACTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  2:2357349/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  >  2:4613798/1‑140 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  2:1980248/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  >  2:2061818/1‑140 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  2:5127650/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  1:2798462/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  2:3140856/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  2:86375/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  2:3356121/140‑1 (MQ=255)

CGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTT‑CC‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGG  >  NZ_CP025268/674482‑674753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`