| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,013,596 | T→C | pseudogene (539/542 nt) *370* (TAA→TAG) |
zapC → ycbX ← |
cell division protein ZapC 6‑N‑hydroxylaminopurine resistance protein YcbX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,013,596 | 0 | T | C | 99.6% | 795.9 / NA | 241 | pseudogene (539/542 nt) *370* (TAA→TAG) | zapC ycbX | cell division protein ZapC 6‑N‑hydroxylaminopurine resistance protein YcbX |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (148/92); minor base G (0/1); total (148/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 241 total aligned reads displayed.
CCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TT‑GGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCCG > NZ_CP025268/1013461‑1013732 | ccGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCCG‑TTGGGCGACGCCATTAAAATCATGAACCACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTaa < 2:3949550/140‑1 (MQ=255)ccGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTaa < 1:2760277/140‑1 (MQ=255) aCTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAAcgcg < 2:2142551/140‑1 (MQ=255) tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc < 1:3607168/140‑1 (MQ=255) tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc < 1:2722426/140‑1 (MQ=255) tGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCaa > 1:1421053/1‑140 (MQ=255) gctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTaa > 1:3535813/1‑140 (MQ=255) ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAg > 1:4577828/1‑140 (MQ=255) ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAg > 1:2431137/1‑140 (MQ=255) ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAg > 2:3506085/1‑140 (MQ=255) ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAg > 1:1739005/1‑140 (MQ=255) ggCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTCATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg > 1:3390727/1‑140 (MQ=255) ggCACAAACCTGCGTTGTTATTGCGGATCCCGCGATGAAGATG‑GGCGACGCCATTAACATCATGAACGACAGGCTCAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg < 2:27890/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAAGCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa > 2:4716639/1‑140 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGcc > 2:2431874/1‑139 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa < 1:1184012/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa < 1:665008/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa > 1:3844677/1‑140 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCGGAAACCGCAGGTTAATGGTGACAGCTTCAGGCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa > 1:3025402/1‑140 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGGCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTGAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa > 1:11263/1‑140 (MQ=255) caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt < 2:1830068/140‑1 (MQ=255) caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt < 1:3166741/140‑1 (MQ=255) caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt < 1:4002826/140‑1 (MQ=255) caACCCGGCGGTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTGAAATCATGAACGACAGGGTGAAACCGCAGGTTAATGTTGACAGCTTCAGCGTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt > 2:1384338/1‑140 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt > 1:1029022/1‑140 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt > 1:5086633/1‑140 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt < 1:1023749/140‑1 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt < 2:4117525/140‑1 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt > 1:3466935/1‑140 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt < 1:2460227/140‑1 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCCCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt < 1:585535/140‑1 (MQ=255) cccTGCGTTGTTATTGCGGGGCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt > 2:3711241/1‑140 (MQ=255) cTGCGTTGTTATTGCGTGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTAGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAAAGTAAGTGCAGGCTTCg > 2:1765015/1‑140 (MQ=255) tGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCgg < 2:1565049/140‑1 (MQ=255) tGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCgg < 2:2883866/140‑1 (MQ=255) gCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGt > 1:4996978/1‑140 (MQ=255) ggttgttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 2:852006/139‑1 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 2:2572523/140‑1 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa > 2:951951/1‑140 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 1:2837923/140‑1 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGAAG‑TTGGGCGACGCCATTAAAATCATGAACGACTGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 2:4832128/140‑1 (MQ=255) gttgttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTac < 2:3200701/140‑1 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAACTCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGTCTCGAACTGGCAGTCTAACGCGCCAGCTTAAGTGCAGTCTTCGGTAcacac > 1:4873314/1‑139 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:4194674/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 2:2100027/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 2:534863/1‑140 (MQ=255) tgaTTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAATTGCAGTCTTCGGGACACAg > 1:1485958/3‑140 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 1:1890904/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 1:1721323/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 2:1652337/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 1:3938065/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGGTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 2:4765606/140‑1 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc > 1:3137842/1‑108 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa < 2:4936935/140‑1 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa < 1:804631/140‑1 (MQ=255) ggTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa < 2:1072/140‑1 (MQ=255) ggTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa > 1:4584231/1‑140 (MQ=255) ggTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa > 2:1136587/1‑140 (MQ=255) tCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCaaa > 1:2669671/1‑140 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa < 2:878455/140‑1 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa < 1:3621917/140‑1 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa > 1:3322464/1‑140 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa < 2:3490767/140‑1 (MQ=255) ttgggCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatc > 1:4340240/4‑140 (MQ=255) ttgggCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatc > 2:2265103/4‑140 (MQ=255) ggCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCatcatc < 1:3506085/140‑1 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 2:3616218/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 1:106450/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 2:656920/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTACCATCATCGc > 2:3025039/1‑140 (MQ=255) cGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCa > 1:1281638/1‑140 (MQ=255) cGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCa > 2:4035513/1‑140 (MQ=255) ccATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCGACTTAAGTGCAGTCTTCGGTACACAGCTGCAGCAAAGAATGGTGCCATCATCGCCCAtt > 1:2517648/1‑140 (MQ=255) taTTAAATTCATGGACGACAGGCTGAAGCCGCAGGTTAATGTTGACAGCTTCAGCTTCGAACAGAGAGTGTAACGCGCCAACTTAAGTGCAGTCTTCAGTACACAGCTACAGCAAAGAATGGTGCCATTATCGCCCATTg < 2:858662/139‑1 (MQ=255) tAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTg < 2:1365882/140‑1 (MQ=255) aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTTAGCCTCGAACAGGCAGTCTAACGCGCCAACCAAACTTCAGTCTTCGGTACACAGCTACAGCAAAGACTAGTGCCTTCCTCTCCTATTGCTGAtttttt > 2:1988414/1‑140 (MQ=255) aaCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAg < 2:5060327/140‑1 (MQ=255) cAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggcg > 1:466440/1‑140 (MQ=255) cAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggcg > 1:1838610/1‑140 (MQ=255) ggCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTg > 2:2682312/1‑140 (MQ=255) gCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGa > 1:2059240/1‑140 (MQ=255) aaCCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCg < 1:5217387/140‑1 (MQ=255) cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTc > 1:3110405/1‑140 (MQ=255) aGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCt < 2:3649763/140‑1 (MQ=255) aGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCt < 1:77361/140‑1 (MQ=255) aGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCt > 2:4533600/1‑140 (MQ=255) gTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGCGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTaa < 1:3193835/140‑1 (MQ=255) aaTGTTGACATCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAg < 2:3983210/140‑1 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAATTAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTGCGCCTTCTAAAAGCTTAaca > 2:2796189/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:1295629/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:929078/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGACGTGACGTCGCCTTCTAAAAGCTGAaca > 2:5316236/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACCTAAGTGCAGGCTTCGGTACACAGCCACAGCAAAGAATGGTCCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAacc > 2:3349901/1‑139 (MQ=255) ttCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCa < 1:1597143/140‑1 (MQ=255) cAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAAc > 1:3679934/1‑140 (MQ=255) gCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACtt < 2:1739005/140‑1 (MQ=255) gAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCcaca > 2:563025/1‑140 (MQ=255) aaCAGGCAGTCTAACGCGCCAACTTACTTGCAGACTTCGGTACACAGCTATAGCAAAGCATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGACAACATCTACaa > 2:1862019/1‑140 (MQ=255) aaCAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACaa > 2:3795790/1‑140 (MQ=255) gCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGcc > 2:1424560/1‑140 (MQ=255) | CCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TT‑GGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCCG > NZ_CP025268/1013461‑1013732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |