Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 2,026,925 A→G *90* (TAA→TAG fliQ → flagellar biosynthesis protein FliQ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252682,026,9250AG99.6% 936.2 / NA 281*90* (TAA→TAGfliQflagellar biosynthesis protein FliQ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (132/148);  minor base T (1/0);  total (133/148)
Fisher's exact test for biased strand distribution p-value = 4.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 281 total aligned reads displayed.

ACGAAATGACGCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAACCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAA  >  NZ_CP025268/2026789‑2027061
                                                                                                                                        |                                                                                                                                        
  gAAATGACGCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTa                                                                                                                                     <  1:3121162/140‑1 (MQ=255)
      tGACGCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTTCCGTGTATCATCGGGTAGCCGTACTAt                                                                                                                                 >  2:329408/1‑140 (MQ=255)
      tGACGCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTAt                                                                                                                                 >  1:2862581/1‑140 (MQ=255)
      tGACGCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTAt                                                                                                                                 >  2:747606/1‑140 (MQ=255)
          gCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTg                                                                                                                             >  1:353362/1‑140 (MQ=255)
          gCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTg                                                                                                                             <  1:3008809/140‑1 (MQ=255)
          gCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTg                                                                                                                             <  2:1059836/140‑1 (MQ=255)
          gCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGAGGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTg                                                                                                                             <  2:4723763/140‑1 (MQ=255)
          ccTGTCGTTGATTCCGAAAATCATCGCCGTATTTAGCGCCATTATTATTGCCGGACCGTGGATTCTCAATCTGTTGCAGGATTATGTCCGCACCTTGTTCGCTAACTTGCCGTATATCATCGGGTAGCCGTACTATGTTg                                                                                                                             <  2:2284332/139‑1 (MQ=255)
              tCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAgg                                                                                                                         >  1:3781640/1‑140 (MQ=255)
               cGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGt                                                                                                                        <  1:4379107/140‑1 (MQ=255)
               cGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGt                                                                                                                        <  1:662876/140‑1 (MQ=255)
                   tATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACa                                                                                                                    >  1:955511/1‑140 (MQ=255)
                   tATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACa                                                                                                                    >  1:4143380/1‑140 (MQ=255)
                     ttCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAg                                                                                                                  <  2:353362/140‑1 (MQ=255)
                     ttCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAg                                                                                                                  <  1:1525371/140‑1 (MQ=255)
                     ttCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAg                                                                                                                  <  1:3187003/140‑1 (MQ=255)
                        cGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAg                                                                                                                  <  1:3401170/137‑1 (MQ=255)
                        cGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGa                                                                                                               >  1:4669092/1‑140 (MQ=255)
                        cGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGa                                                                                                               >  1:3670832/1‑140 (MQ=255)
                          aaaaTCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAAc                                                                                                             <  2:2477066/140‑1 (MQ=255)
                          aaaaTCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAAc                                                                                                             <  2:41190/140‑1 (MQ=255)
                          aaaaTCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAAc                                                                                                             <  2:4360951/140‑1 (MQ=255)
                          aaaaTCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAAc                                                                                                             <  2:1735893/140‑1 (MQ=255)
                          aaaaTCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAAc                                                                                                             <  2:2473488/140‑1 (MQ=255)
                          aaaaTCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAAc                                                                                                             <  1:4679781/140‑1 (MQ=255)
                          aaaaTCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAAc                                                                                                             <  2:2791459/140‑1 (MQ=255)
                             atcatcGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAAt                                                                                                          >  2:560414/1‑140 (MQ=255)
                               catcGCCGTATTTATCGCCATTATTCTTGCCGGACCGTGGATGCTCACTCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATgg                                                                                                        <  2:3786332/140‑1 (MQ=255)
                                atcGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCAGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGc                                                                                                       >  1:4781620/1‑140 (MQ=255)
                                    ccGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATc                                                                                                   <  2:119440/140‑1 (MQ=255)
                                    acatttttATAGCAATTATCATGGCCGCACAGTGGACGCCCACGCTGTTGCTGGATTACGTCCGAACCTTGTTCACTAGACTGCCGTATATCATCGTGTAGCCGTACTCTGTTGCAGGTGACCAGCGAACAATGGCTATc                                                                                                   <  2:2631113/135‑1 (MQ=255)
                                         tttATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTACCCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGt                                                                                              <  2:641368/140‑1 (MQ=255)
                                         tttATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGt                                                                                              <  1:1619587/140‑1 (MQ=255)
                                         tttATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGt                                                                                              <  1:1211203/140‑1 (MQ=255)
                                         tttATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGt                                                                                              <  1:2613867/140‑1 (MQ=255)
                                            aTCGCCTTTATTATTGCCGAACCGTGTATTCTCAATCTGTTACTGCTTTACGGCCGCGCCTTGTTCACTAACCTGCCGGATATCATCGGGTAGTCGTACTATGTTGCGTCTGACAAGCGAACAATGGCTGTCCTGGTTat                                                                                           <  2:1255625/140‑2 (MQ=255)
                                            aTCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTaa                                                                                           <  1:2518478/140‑1 (MQ=255)
                                              cGCCATTATTATTGCCTGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTCGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAAc                                                                                         <  1:4266893/140‑1 (MQ=255)
                                                ccATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCCCCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAACCCt                                                                                       <  1:1797791/140‑1 (MQ=255)
                                                 cATTCTTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTg                                                                                      >  2:4943021/1‑140 (MQ=255)
                                                      ttattGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACtt                                                                                 <  1:1113645/140‑1 (MQ=255)
                                                        attGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCt                                                                               <  1:2147253/140‑1 (MQ=255)
                                                           gCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGc                                                                            >  2:2177733/1‑140 (MQ=255)
                                                           gCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGc                                                                            >  1:709583/1‑140 (MQ=255)
                                                              ggACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGt                                                                         >  2:438627/1‑140 (MQ=255)
                                                               gACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGtt                                                                        <  1:4963150/140‑1 (MQ=255)
                                                                         gCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTg                                                              <  1:1966812/140‑1 (MQ=255)
                                                                          cTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAAc                                                                                                             <  1:391672/92‑1 (MQ=255)
                                                                          cTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAAc                                                                                                             >  2:391672/1‑92 (MQ=255)
                                                                          cTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGc                                                             <  1:4997829/140‑1 (MQ=255)
                                                                               tccgctGCTGGATTTCCTCCGAACCTTATTAACTTCCATGCCGTACATCACCGGGTAGACGTACTCTGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTCACCCTGTACTTCTGGCCTTTCGTGCGCGTGCTGgcg                                                        <  2:4462590/135‑1 (MQ=255)
                                                                               tCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGgcg                                                        <  1:885539/140‑1 (MQ=255)
                                                                               tCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGgcg                                                        <  1:1692500/140‑1 (MQ=255)
                                                                               tCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGgcg                                                        >  1:1336829/1‑140 (MQ=255)
                                                                               tCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGgcg                                                        >  1:2367397/1‑140 (MQ=255)
                                                                               tCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGgcg                                                        <  1:430847/140‑1 (MQ=255)
                                                                                 tGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCt                                                      <  2:1859946/140‑1 (MQ=255)
                                                                                   ttGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGATGGCGCTgg                                                    >  2:5204109/1‑139 (MQ=255)
                                                                                     gCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCCGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGAtc                                                  >  1:4840196/1‑140 (MQ=255)
                                                                                     gCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGAtc                                                  >  2:3371104/1‑140 (MQ=255)
                                                                                     gCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGGGCTGGCGCTGAtc                                                  <  2:3471616/140‑1 (MQ=255)
                                                                                          aTTACGTCCGCACCTTGTTTACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACGAGCGAACACTGGCGATCCTGGTTAAACCTGTACTTCTGGCAGTTACTGCGCGTGCTGGCGCTGATCTCCAc                                             <  2:876162/140‑1 (MQ=255)
                                                                                          aTTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCAc                                             <  1:4518095/140‑1 (MQ=255)
                                                                                             aCGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACcgc                                          >  2:3421413/1‑140 (MQ=255)
                                                                                              cGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACcgcg                                         >  1:2487715/1‑140 (MQ=255)
                                                                                                tCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGcc                                       >  2:322971/1‑140 (MQ=255)
                                                                                                    cACCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCGGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGAtt                                   >  1:1186383/1‑140 (MQ=255)
                                                                                                     aCCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTc                                  <  1:3612484/140‑1 (MQ=255)
                                                                                                     aCCTTGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTc                                  <  1:5265913/140‑1 (MQ=255)
                                                                                                         tGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAg                              >  1:2035080/1‑140 (MQ=255)
                                                                                                         tGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAg                              >  2:5331379/1‑140 (MQ=255)
                                                                                                         tGTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAg                              >  2:4653357/1‑140 (MQ=255)
                                                                                                          gTTCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGc                             <  1:2786156/140‑1 (MQ=255)
                                                                                                           ttCACTAACCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCg                            >  1:580392/1‑140 (MQ=255)
                                                                                                                tAACCTGCCGTATATGATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCTAACAATGGCTATCCTGGTTAAACCAGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGc                       >  1:2279304/1‑140 (MQ=255)
                                                                                                                 caccgggcGTTTATCATCGGGTAGCCGTACTATATTGCAGGTGGCAAGCGAACAATGGCTATACTGGTTAAACCTCTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCGCCAACGCGCCGATTCTGAGCGAACGCa                      <  2:4765148/133‑1 (MQ=255)
                                                                                                                 aaCCTGCGGTATATCATCGGGCAGCCGTACTATGTTGCAGGTGACAACCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGCCGTTTATCTCCACCGCGCCGTTTCTGAGCGAACGCa                      >  2:2944967/1‑140 (MQ=255)
                                                                                                                 aaCCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACgaa                      <  2:4840196/140‑3 (MQ=255)
                                                                                                                 aaCCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCa                      <  2:3208288/140‑1 (MQ=255)
                                                                                                                 aaCCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCa                      <  2:3755898/140‑1 (MQ=255)
                                                                                                                 aaCCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCa                      <  2:2554011/140‑1 (MQ=255)
                                                                                                                 aaCCTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCa                      >  1:4023023/1‑140 (MQ=255)
                                                                                                                   ccTGCCGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGc                    >  2:1464285/1‑140 (MQ=255)
                                                                                                                     tGCCGTCTATCATCGGGTCGCCGACCTATGTTGCAGGTCACAAGCGAACAATGGCTATCCTGCTTCAACCTGTACCTCTGGCCGTTCCTGCGCCTGCTCCCGCTGCCCTCCCCCGCGCCGACTCCCAGCGCCCGCAGCgc                  >  2:2876607/1‑139 (MQ=255)
                                                                                                                       ccGTATAGCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTAc                >  2:3611744/1‑140 (MQ=255)
                                                                                                                        cGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTAcc               >  2:1285099/1‑140 (MQ=255)
                                                                                                                        cGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTAcc               >  1:1652865/1‑140 (MQ=255)
                                                                                                                        cGTATATCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCCGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTAcc               >  2:2732810/1‑140 (MQ=255)
                                                                                                                           atatCATCGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGaa            <  1:3415304/140‑1 (MQ=255)
                                                                                                                                atcGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACggg       <  1:61065/140‑1 (MQ=255)
                                                                                                                                atcGGGTAGACGTACTATGTTGCACGTGAAAAGCGAACAATGGCTATCCTGGTCAAACCTATACTTCTCGCCGTTACCGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACggg       <  2:1555213/140‑1 (MQ=255)
                                                                                                                                 tcGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGt      >  1:4526876/1‑140 (MQ=255)
                                                                                                                                 tcGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGt      >  2:4492018/1‑140 (MQ=255)
                                                                                                                                 tcGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGt      >  1:5127263/1‑140 (MQ=255)
                                                                                                                                 tcGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGt      >  2:5033994/1‑140 (MQ=255)
                                                                                                                                 tcGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGt      >  1:1741752/1‑140 (MQ=255)
                                                                                                                                 tcGGGTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGAGt      >  1:4583783/1‑140 (MQ=255)
                                                                                                                                    ggTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTaaa   >  1:3335503/1‑140 (MQ=255)
                                                                                                                                    ggTAGCCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTaaa   >  2:3637123/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                        
ACGAAATGACGCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAACCGTACTATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAA  >  NZ_CP025268/2026789‑2027061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: