| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,884,842 | T→C | D269G (GAT→GGT) | dnaA ← | chromosomal replication initiator protein DnaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,884,842 | 0 | T | C | 99.4% | 1069.2 / NA | 325 | D269G (GAT→GGT) | dnaA | chromosomal replication initiator protein DnaA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (116/207); minor base G (1/1); total (117/208) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 328 total aligned reads displayed.
TGTCGTTTTCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGATCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGAACGGTAGTAGCG > NZ_CP025268/3884705‑3884978 | gTCGTTTTCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCg < 2:4971207/140‑1 (MQ=255) tCGTTTTCGTGGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGATGCGGGAGTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAACGACCCgg > 2:3405775/1‑139 (MQ=255) tCGTTTTCGTCGGCCTTTTTCATCAGGATCGCCACCCGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGa < 1:1544852/140‑1 (MQ=255) cGTTTTCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAg < 1:3259755/140‑1 (MQ=255) cGTTTTCGGCGGCCTTTTACCTCAGGGTCGCTACACGGGTTTCCAGCGCTGGCTGTGCGGTCGCCACAGTCAGTCCCCAACCTACCCGTGATTTCCATCGAGACTCACCGACGTTGATCTCTTTTGTATAGCGTCCCGAg < 2:2705919/140‑1 (MQ=255) gTTTTCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAgg < 1:1087938/140‑1 (MQ=255) gTTTTCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAgg < 2:2654783/140‑1 (MQ=255) gTTTTCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAgg < 2:3626624/140‑1 (MQ=255) tttCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTg < 1:4082773/140‑1 (MQ=255) ttCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTga < 2:2625241/140‑1 (MQ=255) ttCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGACACAGTCAGTCCCCAACCCAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTga < 2:4034076/140‑1 (MQ=255) cgtcgGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTgaga < 2:1669528/140‑1 (MQ=255) cgtcgGCCTGTTTCATCAGGATCTCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTGTCGGATAGCGACCCGAGGTgaga < 2:2789545/140‑1 (MQ=255) gtcgGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGaa > 2:3881368/1‑140 (MQ=255) tcgGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCACCAGTCAGTCTCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATGGGGACCCGAGCTGAGaac > 2:4481186/1‑139 (MQ=255) gcttttttCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCAAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGAt < 1:4794455/137‑1 (MQ=255) gCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGAt < 1:1646048/140‑1 (MQ=255) gCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGAt < 2:4352511/140‑1 (MQ=255) gCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGAt < 1:2105490/140‑1 (MQ=255) gCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGAt < 2:5233702/140‑1 (MQ=255) gCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTGCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCGTTCGGATAGCGACCCGAGGTGAGAATGAt < 2:5080526/140‑1 (MQ=255) gCCTTTTTCATCAGGAGCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGAt < 1:135259/140‑1 (MQ=255) ccTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATc < 1:534213/140‑1 (MQ=255) ccTTTTGCATCAGGCTCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATc < 2:796780/140‑1 (MQ=255) catcaGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGAt < 1:578833/140‑1 (MQ=255) catcaGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGAt < 2:4319912/140‑1 (MQ=255) catcaGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGAt < 2:2302335/140‑1 (MQ=255) catcaGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGAt < 1:4574002/140‑1 (MQ=255) ggATCGCCGCACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGGAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAACGACCCGAGGTGAGAATGATCTGTTGATTACCt > 2:3205870/1‑140 (MQ=255) ggATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCt < 1:979710/140‑1 (MQ=255) ggATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCt < 2:3849962/140‑1 (MQ=255) ccACACGGGTTTCCAGCTCTGTCGGTTGGATCGCCACAGTCAGTCCCCAACCGATGCGGGATTTCAAACGATCCTCAGCGCCGTTGATCTCTTTCGGAGAGCGACCCGAGGTGAGAATGATCTGCTGATTAGCTTCcatt > 2:4186305/1‑138 (MQ=255) ccACACGGGTTTCCAGCTCTGGCGGTTCGAGCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCcagc < 1:242843/140‑1 (MQ=255) cacaCGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCcagca < 1:2285646/140‑1 (MQ=255) gggTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGGTGAGTACCTTCCAGCAGGGCg > 2:2163915/1‑140 (MQ=255) tttCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAACCGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTg < 2:1422950/140‑1 (MQ=255) tttCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGCTAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTg < 2:2430419/140‑1 (MQ=255) tttCCAGATCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGAGCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTg < 2:347294/140‑1 (MQ=255) tCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGCATGATCTGTTGATTACCTTCCAGCAGGGCGTTGaa > 2:1979261/1‑140 (MQ=255) ctctGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGgtgt > 1:655998/1‑140 (MQ=255) ggCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGaa > 1:4847263/1‑140 (MQ=255) ttCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAAct < 2:3246210/140‑1 (MQ=255) ttCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAAct < 1:143062/140‑1 (MQ=255) aTCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTc > 2:1293796/1‑140 (MQ=255) acaGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCTGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTgaga < 1:3648162/140‑1 (MQ=255) tcagtcCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGt > 1:3720784/1‑140 (MQ=255) gtcCCAGACCGAAGCGGGATTTCAAACGACCCTCAACCCCGCTGATCTCTCTCGGATAACTACCCGAGGTGAGAATGATCTGCTGATTACCTTCCAGCACGGCGTTGAATGTGTGAAAAAACTCTTCCTGAGATCGTTCt > 2:1124788/1‑140 (MQ=255) ccccAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCttt > 1:903181/1‑140 (MQ=255) ccccAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCttt > 1:5298420/1‑140 (MQ=255) ccccAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCttt > 1:3622333/1‑140 (MQ=255) cAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGGGTGGAAAAACTCTTCCTGAGATCGTTCTttatt > 1:2779501/1‑140 (MQ=255) aaCCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTttatta > 2:1599805/1‑140 (MQ=255) aCCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTg > 2:4024500/1‑100 (MQ=255) aCCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTg < 1:4024500/100‑1 (MQ=255) aCCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAg > 2:117779/1‑140 (MQ=255) aaGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGGTAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCaaa > 1:4196947/1‑140 (MQ=255) aaGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCaaa < 1:1459105/140‑1 (MQ=255) aaGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCaaa > 1:367088/1‑140 (MQ=255) aaGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCaaa > 2:520374/1‑140 (MQ=255) aaGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCaaa < 2:2028740/140‑1 (MQ=255) aaGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCGTTATTAGCaaa > 1:2891338/1‑140 (MQ=255) gCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCTAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCaaaaa > 1:4435559/1‑140 (MQ=255) cGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCaaaaaa < 1:2996187/140‑1 (MQ=255) tttCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGaa > 1:2340607/1‑140 (MQ=255) cAAACGATCCTCCACGCCGTTGATCTCTTTCGGATAGCGACCAGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAatat < 1:2163915/140‑1 (MQ=255) cAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAatat < 1:520967/140‑1 (MQ=255) cAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAatat < 1:3131311/140‑1 (MQ=255) aaCGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAAGTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATAtcg < 1:3755416/140‑1 (MQ=255) aaCGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATAtcg < 1:4981242/140‑1 (MQ=255) aaCGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATAtcg < 1:3488933/140‑1 (MQ=255) gATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATAtcgtcg < 1:1134505/140‑1 (MQ=255) gATCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGGGAGAATGATCTGTTGAGTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATAtcgtcg > 2:5259738/1‑140 (MQ=255) tCCTCAACGCCGTTGATCTCTTTCTGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGAt < 2:3693994/140‑1 (MQ=255) tCCTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGAt < 1:2631462/140‑1 (MQ=255) ccTCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATc < 1:1289987/140‑1 (MQ=255) tCAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATcag < 1:3881368/140‑1 (MQ=255) cAACGCCGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATcagc < 1:1575613/140‑1 (MQ=255) gCCGTTGATCTCGTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTg < 2:3772500/140‑1 (MQ=255) cGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATcagc < 2:839843/134‑1 (MQ=255) cGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCa > 1:2023767/1‑140 (MQ=255) cGTTGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCa > 2:1380803/1‑140 (MQ=255) ttGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAGGGTGTGGAAAAACTCTTCCTGAGCTCGTTCTTTATTAGCAAAAAACTGAATATAGTCGATCAGCAGTGCATc > 2:1270266/1‑140 (MQ=255) ttGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATc > 2:2544467/1‑140 (MQ=255) tGATCTCTTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCt > 1:3970924/1‑140 (MQ=255) ctctTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACgg < 1:3239979/140‑1 (MQ=255) ctctTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACgg < 2:3946381/140‑1 (MQ=255) ctctTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACgg < 1:774600/140‑1 (MQ=255) ctctTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACgg < 1:103526/140‑1 (MQ=255) ctctTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACgg < 1:83094/140‑1 (MQ=255) ctctTCCTGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGACATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACgg < 2:546801/140‑1 (MQ=255) ctTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGaa < 1:1913203/140‑1 (MQ=255) ctTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGaa < 1:4319731/140‑1 (MQ=255) ctTTCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGaa < 1:1241951/140‑1 (MQ=255) tCGGATAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGAACgg > 2:175604/1‑140 (MQ=255) aTAGCGAGCCGGGGTGAGAATGATCTGTTGAGTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATGTCGTCGATCAGCAGTGCATCTACGGAACGgtagt < 2:595990/140‑1 (MQ=255) aTAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGAACGgtagt < 2:4819623/140‑1 (MQ=255) aTAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGAACGgtagt < 2:2894266/140‑1 (MQ=255) aTAGCGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGAACGgtagt < 1:4474106/140‑1 (MQ=255) cGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGAACGGTAGTAGCg > 2:4587945/1‑140 (MQ=255) cGACCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGAAAGGtagtaggt > 2:3031127/1‑138 (MQ=255) | TGTCGTTTTCGTCGGCCTTTTTCATCAGGATCGCCACACGGGTTTCCAGCTCTGGCGGTTCGATCGCCACAGTCAGTCCCCAACCGAAGCGGGATTTCAAACGATCCTCAACGCCGTTGATCTCTTTCGGATAGCGATCCGAGGTGAGAATGATCTGTTGATTACCTTCCAGCAGGGCGTTGAAGGTGTGGAAAAACTCTTCCTGAGATCGTTCTTTATTAGCAAAAAACTGAATATCGTCGATCAGCAGTGCATCTACGGAACGGTAGTAGCG > NZ_CP025268/3884705‑3884978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |