BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,922,869	T→C	80 (TAA→TAG)	atpE ←	F0F1 ATP synthase subunit C

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,922,869	0	T	C	100.0%	1506.1 / NA	442	80 (TAA→TAG)	atpE	F0F1 ATP synthase subunit C
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (222/220); total (222/220)

Only 100 of 442 total aligned reads displayed.

ACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGG  >  NZ_CP025268/3922734‑3923004

aCGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTAcg                                                                                                                                     <  2:2826991/140‑1 (MQ=255)

  gTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTAcgcg                                                                                                                                   <  1:1414134/140‑1 (MQ=255)

      ttCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAg                                                                                                                               >  1:4712617/1‑140 (MQ=255)

      ttCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAg                                                                                                                               >  1:3413948/1‑140 (MQ=255)

      ttCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAg                                                                                                                               >  1:890629/1‑140 (MQ=255)

      ttCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAg                                                                                                                               >  1:2004576/1‑140 (MQ=255)

      ttCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAg                                                                                                                               >  2:2104598/1‑140 (MQ=255)

        cATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGGTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCg                                                                                                                             >  1:5278362/1‑140 (MQ=255)

        cATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCg                                                                                                                             >  1:4665674/1‑140 (MQ=255)

        cATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCg                                                                                                                             >  1:5106940/1‑140 (MQ=255)

        cATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCg                                                                                                                             >  2:3882490/1‑140 (MQ=255)

         aTGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGa                                                                                                                            <  2:1970651/140‑1 (MQ=255)

          tGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGaa                                                                                                                           >  1:4314289/1‑140 (MQ=255)

          tGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGaa                                                                                                                           >  1:5155720/1‑140 (MQ=255)

          tGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGaa                                                                                                                           >  1:5340342/1‑140 (MQ=255)

          tGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGaa                                                                                                                           >  1:2331846/1‑140 (MQ=255)

           gCAGAACAGAACGAACAGGACAAACGCGATAGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAAc                                                                                                                          >  2:2191747/1‑140 (MQ=255)

               aacagaacGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCa                                                                                                                      >  1:378991/1‑140 (MQ=255)

               aacagaacGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGAGTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTCCGCGACAGCGAACATCa                                                                                                                      >  2:3510762/1‑140 (MQ=255)

                   gaacgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGAGTCACAGCACAATGCCTCTAGTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTa                                                                                                                  <  2:3182326/140‑1 (MQ=255)

                    aacgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAc                                                                                                                 >  2:2395051/1‑140 (MQ=255)

                    aacgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAc                                                                                                                 >  1:4366989/1‑140 (MQ=255)

                    aacgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAc                                                                                                                 >  1:4102990/1‑140 (MQ=255)

                    aacgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAc                                                                                                                 >  2:4684108/1‑140 (MQ=255)

                    aacgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAc                                                                                                                 >  2:3962579/1‑140 (MQ=255)

                    aacgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAc                                                                                                                 <  1:4891588/140‑1 (MQ=255)

                    aacgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGACTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAc                                                                                                                 <  2:4280036/140‑1 (MQ=255)

                    aacgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGGTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAc                                                                                                                 >  1:446214/1‑140 (MQ=255)

                         acAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTTcagacc                                                                                                            >  2:4457043/1‑140 (MQ=255)

                         acAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAcagacc                                                                                                            >  1:495393/1‑140 (MQ=255)

                         acAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAcagacc                                                                                                            <  1:3636196/140‑1 (MQ=255)

                         acAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAcagacc                                                                                                            >  1:5038101/1‑140 (MQ=255)

                         acAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAcagacc                                                                                                            <  1:1473635/140‑1 (MQ=255)

                         acAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAcagacc                                                                                                            <  2:3614774/140‑1 (MQ=255)

                         acAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAcagacc                                                                                                            <  1:804409/140‑1 (MQ=255)

                         acAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGGAcagacc                                                                                                            >  2:2763732/1‑140 (MQ=255)

                         acAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTAAGCGACAGCGGACATAACGTAcagacc                                                                                                            >  1:4254590/1‑140 (MQ=255)

                              aCAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTAcagacccagac                                                                                                       <  1:1115929/140‑1 (MQ=255)

                                      gATGGCCTGGCCGAGTATGGTTGCGTTATGATTCACAGCACAATGTCCCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGGCACGCTTTCTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCg                                                                                               <  2:1144955/140‑1 (MQ=255)

                                       aTGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGa                                                                                              >  2:5085246/1‑140 (MQ=255)

                                       aTGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGa                                                                                              >  1:2358655/1‑140 (MQ=255)

                                       aTGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGa                                                                                              >  1:2768408/1‑140 (MQ=255)

                                          gcctggccTACAATTGTTCCGTTAAGCTTCACAGCACGATGCCTCTATTTAGTTAGCGTTCTGCTCTTGCTCTTTAAGTAAAAGCAACGCTTACGACGCGACAGCGAACATCACGTACAGCCCCAGACCTACAGCGatca                                                                                           <  2:5210609/140‑1 (MQ=255)

                                                ccGAGGATTGTTGCGTTAAGATTCACAGCACTATGCCTGTATTTAGTTAACCTTGTGATAGTGCTCGTTAATTAAAAGCACCGGTTACTACGCGACAGCGAACATCACGTACAGACCCCGAACTACAGCGATCACCGGGa                                                                                     <  2:480723/140‑1 (MQ=255)

                                                ccGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGa                                                                                     <  2:967341/140‑1 (MQ=255)

                                                ccGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGa                                                                                     <  2:3139098/140‑1 (MQ=255)

                                                ccGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGa                                                                                     <  1:1169838/140‑1 (MQ=255)

                                                    ggATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGc                                                                                 >  1:2098398/1‑140 (MQ=255)

                                                     gATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCa                                                                                <  1:175870/140‑1 (MQ=255)

                                                     gATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCa                                                                                <  2:3096806/140‑1 (MQ=255)

                                                     gATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCa                                                                                <  2:1282967/140‑1 (MQ=255)

                                                     gATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCa                                                                                >  1:3949115/1‑140 (MQ=255)

                                                         gttgCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATcca                                                                            >  2:1438147/1‑140 (MQ=255)

                                                          ttgCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATccac                                                                           <  1:995654/140‑1 (MQ=255)

                                                          ttgCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATccac                                                                           <  1:3134145/140‑1 (MQ=255)

                                                                  aGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCa                                                                   <  1:1364050/140‑1 (MQ=255)

                                                                   gATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCAt                                                                  <  1:1010884/140‑1 (MQ=255)

                                                                    aTTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATa                                                                 >  1:1267217/1‑140 (MQ=255)

                                                                     ttCACAGCCCAATGCCTCTATTTAGTTCACGTTATGATATTGCTCTTTCAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATaa                                                                <  1:3047765/140‑1 (MQ=255)

                                                                     ttCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGAGAACATCACTTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATaa                                                                <  2:1807883/140‑1 (MQ=255)

                                                                       cacaGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACg                                                              <  1:1675720/140‑1 (MQ=255)

                                                                          aGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATa                                                           >  2:3745477/1‑140 (MQ=255)

                                                                          aGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATa                                                           <  1:2885908/140‑1 (MQ=255)

                                                                            cacaATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAAc                                                                                                                          <  2:824597/75‑1 (MQ=255)

                                                                            cacaATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATaaa                                                         <  2:1338076/140‑1 (MQ=255)

                                                                            cacaATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATaaa                                                         >  1:1304419/1‑140 (MQ=255)

                                                                              caATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGa                                                       >  2:4112242/1‑140 (MQ=255)

                                                                              caATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGa                                                       <  1:3171126/140‑1 (MQ=255)

                                                                               aaTGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGGCCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGaa                                                      <  2:693219/140‑1 (MQ=255)

                                                                               aaTGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGaa                                                      >  2:1514606/1‑140 (MQ=255)

                                                                                 tGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACt                                                    >  1:3343867/1‑140 (MQ=255)

                                                                                     tctATTTGGTTAACGTTATGATATTGCTCTTTAAATAAAAGGATCGCTTACTACGCGACAGCGAACATAAAGTACAGACCCAGACCTGCAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGt                                                <  2:4508559/140‑1 (MQ=255)

                                                                                      ctATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTa                                                                                                                  >  1:3231027/1‑73 (MQ=255)

                                                                                      ctATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTa                                               >  1:2166711/1‑140 (MQ=255)

                                                                                      ctATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTa                                               >  1:1882844/1‑140 (MQ=255)

                                                                                        aTTTCGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACg                                             <  2:3067424/140‑1 (MQ=255)

                                                                                          ttAGGTAACTTTCTGATATTGCGCTTAAAATAAAAGCAACGCGTACTACGCGACAGCGAACATCACGTACAAACCCAGACTTACAGCGATCATCGGGATAGCATCCACCAGACCCATTACGATTAAGAACTGAGTTCgca                                           <  2:2647601/140‑1 (MQ=255)

                                                                                           tAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcag                                          >  1:4406130/1‑140 (MQ=255)

                                                                                             gTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca                                        >  1:2463830/1‑140 (MQ=255)

                                                                                             gTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca                                        <  2:567519/140‑1 (MQ=255)

                                                                                             gTTAACGTTCTGAGATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca                                        <  2:915258/140‑1 (MQ=255)

                                                                                              ttAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGcagcag                                       >  2:2430711/1‑140 (MQ=255)

                                                                                               tAACGTTCTGATATTGCCCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCaga                                      <  2:47557/140‑1 (MQ=255)

                                                                                                  cGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTCCAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACTATAAAGAACTGAGTACGCAGCAGAGGa                                   <  1:3513103/140‑1 (MQ=255)

                                                                                                   gTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGaa                                  >  1:459031/1‑140 (MQ=255)

                                                                                                      cTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatca                               >  2:2036769/1‑140 (MQ=255)

                                                                                                        gATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCAGCGGGATAGCATCCACCAGACCCATAACGATAAAGATCAGAGTACGCAGCAGAGGAatcaga                             >  2:4228348/1‑140 (MQ=255)

                                                                                                              gCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGt                       >  1:2242783/1‑140 (MQ=255)

                                                                                                              gCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGt                       >  2:5043732/1‑140 (MQ=255)

                                                                                                               ctctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGtt                      >  2:3786689/1‑140 (MQ=255)

                                                                                                               ctctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGtt                      >  2:1559065/1‑140 (MQ=255)

                                                                                                               ctctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGtt                      >  1:4797614/1‑140 (MQ=255)

                                                                                                                 ctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatcagat                            <  1:610723/132‑1 (MQ=255)

                                                                                                                          aaaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcg           <  1:3831717/140‑1 (MQ=255)

                                                                                                                          aaaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcg           <  1:2658995/140‑1 (MQ=255)

                                                                                                                          aaaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcg           <  1:4165547/140‑1 (MQ=255)

                                                                                                                           aaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcgc          <  2:5156375/140‑1 (MQ=255)

                                                                                                                           aaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcgc          >  1:2626615/1‑140 (MQ=255)

                                                                                                                            aGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCACTGCGcc         >  2:3268427/1‑140 (MQ=255)

                                                                                                                            aGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAAAACTGAGTACGCAGCATAGGAATCAGAGCAGGTTGACGCGCTGCGcc         >  1:3021409/1‑140 (MQ=255)

ACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGG  >  NZ_CP025268/3922734‑3923004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`