BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	4,020,682	A→G	476 (TAA→TAG)	rmuC →	DNA recombination protein RmuC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	4,020,682	0	A	G	100.0%	895.1 / NA	266	476 (TAA→TAG)	rmuC	DNA recombination protein RmuC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (130/136); total (130/136)

Only 100 of 266 total aligned reads displayed.

TAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAACCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTT  >  NZ_CP025268/4020547‑4020815

 aaaCGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCAt                                                                                                                                  <  2:3093668/140‑1 (MQ=255)

  aaCGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCAtt                                                                                                                                 <  1:4819344/140‑1 (MQ=255)

  aaCGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCAtt                                                                                                                                 <  1:304174/140‑1 (MQ=255)

   aCGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTg                                                                                                                                >  1:257512/1‑140 (MQ=255)

     gcgGGATTAATCCGGATGTGGCAGGACAGGCGGGGAGCCAGGATGAAGAGTATCGACATCGGTGGGTGCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCGGTCGCGCTAGCCCATTggg                                                                                                                              <  2:2728189/140‑1 (MQ=255)

     gcgAGCTTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTggg                                                                                                                              <  2:4707209/140‑1 (MQ=255)

     gcgAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGCCTTCGGTCGGTTCCGGAGCAGCCCAATGATGAACCTTATCAACGCGATGATGACTATAATCAGCAGTCGCGCTAGCCCATTggg                                                                                                                              <  2:4878229/140‑1 (MQ=255)

     gcgAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCATCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTggg                                                                                                                              <  2:2830939/140‑1 (MQ=255)

     gcgAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTggg                                                                                                                              <  2:3862940/140‑1 (MQ=255)

     gcgAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTggg                                                                                                                              <  2:5322255/140‑1 (MQ=255)

      cgAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGa                                                                                                                             <  2:354804/140‑1 (MQ=255)

      cgAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGa                                                                                                                             <  1:1443400/140‑1 (MQ=255)

       gagaTTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGag                                                                                                                            <  1:5183978/140‑1 (MQ=255)

       gagaTTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGag                                                                                                                            <  1:3328365/140‑1 (MQ=255)

               tCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAg                                                                                                                    <  1:3261438/140‑1 (MQ=255)

                 cGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGcc                                                                                                                  <  2:2151790/140‑1 (MQ=255)

                    aTTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTCGTTAAGCCggg                                                                                                               >  1:2840963/1‑140 (MQ=255)

                     tttGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGt                                                                                                              <  2:3325365/140‑1 (MQ=255)

                       tGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAg                                                                                                            <  2:3599366/140‑1 (MQ=255)

                       tGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAg                                                                                                            <  1:1163668/140‑1 (MQ=255)

                         gCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGaa                                                                                                          >  1:1475800/1‑140 (MQ=255)

                             agcAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGATTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCt                                                                                                      <  2:2747700/138‑1 (MQ=255)

                             aaCAGGCGGTGAGCCCGGATGAAGAGTATCGACTTCGGCCGGTTCCCGAGCAGCCGAATGATGAAGCTTACCAACGCGACGATGAATATAATCAGCAGCCGCGCCAGCCCATTGGGCGTACTTAAGCCGGGTAGAAATCt                                                                                                      >  2:3054295/1‑140 (MQ=255)

                             aaCAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCt                                                                                                      >  1:782777/1‑140 (MQ=255)

                                 ggCGGGGAGCCAGGATGAAGAGTATCGACGTCGGTCGGTTCCGGAGCAGACGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAAGCTAggg                                                                                                  <  2:674262/140‑1 (MQ=255)

                                  gCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGc                                                                                                 >  1:3582748/1‑140 (MQ=255)

                                     gTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATc                                                                                              <  1:3997063/140‑1 (MQ=255)

                                       gAGCCAGTATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGa                                                                                            <  2:60908/140‑1 (MQ=255)

                                        aGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGACGAATGAAGAAGATTATCAACGCGATGATGAATATAATCAGCAGTCGCGCAAGCCCATCGGGAGTAGTTAAGCCGGGTAGAAATAGAGCGCATCGAc                                                                                           >  2:1910324/1‑140 (MQ=255)

                                         gCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACg                                                                                          <  2:1840132/140‑1 (MQ=255)

                                           cAGGATGAAGGGTATCGACTTCAGTCGGTTCCGTACAAGCCGAATGATAGAGCTAAACAACGCGATGATGAAAATAATCAGCAGTCGCGCAAGCCCATTGGAAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCCACGcc                                                                                        <  2:4162042/140‑1 (MQ=255)

                                           cAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGcc                                                                                        <  1:276104/140‑1 (MQ=255)

                                           cAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGcc                                                                                        <  1:1817575/140‑1 (MQ=255)

                                             ggATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCa                                                                                      <  2:1094256/140‑1 (MQ=255)

                                             ggATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCa                                                                                      <  1:1014658/140‑1 (MQ=255)

                                              gATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCaa                                                                                     <  1:1162244/140‑1 (MQ=255)

                                              gATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCaa                                                                                     <  1:1190262/140‑1 (MQ=255)

                                                    gagTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGtt                                                                               >  2:4778952/1‑140 (MQ=255)

                                                     agTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGACGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTa                                                                              >  1:2336975/1‑140 (MQ=255)

                                                       tATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTaca                                                                            >  2:2283802/1‑140 (MQ=255)

                                                        aTCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGTTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTacac                                                                           >  1:4606527/1‑140 (MQ=255)

                                                        aTCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTacac                                                                           >  2:5071469/1‑140 (MQ=255)

                                                            aCTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCt                                                                       >  2:2768067/1‑140 (MQ=255)

                                                            aCTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCt                                                                       >  2:2652348/1‑140 (MQ=255)

                                                            aCTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGAAGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCt                                                                       >  1:3192516/1‑140 (MQ=255)

                                                               tcggtcggTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGa                                                                    >  1:5164116/1‑140 (MQ=255)

                                                                            gAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTtgat                                                       <  2:3994071/140‑1 (MQ=255)

                                                                               ccgcCGAATGCTGAAGCTTATCCACGCGATGATGAATCTAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTACGCCGGGTAGACATCTAGGGCATCGACGCCCAATCTGTTCCTATTCTGGAACCCTTTTTTGATGAg                                                    <  2:3830652/138‑1 (MQ=255)

                                                                               cagcCGAATGATGCAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAg                                                    <  2:4125583/140‑1 (MQ=255)

                                                                               cagcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAg                                                    <  1:953946/140‑1 (MQ=255)

                                                                               cagcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAg                                                    <  1:124347/140‑1 (MQ=255)

                                                                               cagcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAg                                                    <  2:73697/140‑1 (MQ=255)

                                                                                agcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGc                                                   <  1:3384426/140‑1 (MQ=255)

                                                                                agcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGc                                                   <  1:5225486/140‑1 (MQ=255)

                                                                                 gcagAATGATAAAGCTTATCAACGCGATTATGAATATAATCAGCAGTCGCGCTAGCCCCTTGGGAGTAGTTAAGACGGGTAGAAATCTAGGGCATCGACGCACAGTCTGTTACACTTCTGGAACCATTTTTTGATGAGCa                                                  >  2:319121/4‑140 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCa                                                  >  1:2580768/1‑140 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCa                                                  >  1:1594645/1‑140 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCa                                                  <  1:1702787/140‑1 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCa                                                  >  1:1526322/1‑140 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCa                                                  >  1:1757289/1‑140 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCa                                                  <  2:4992778/140‑1 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCa                                                  <  1:4474242/140‑1 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCa                                                  >  2:4394157/1‑140 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATGTTTTGATGAGCa                                                  >  1:3755796/1‑140 (MQ=255)

                                                                                 gcCGAATGATGAAGCTTATCAACGCGAGGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAAGCTAGGGCATCGACGCCCGATCTGTTACACTTCTGGAACAATTTTTTGATGAGCa                                                  >  2:3933585/1‑140 (MQ=255)

                                                                                 gcCGAAGGGTGACGCTTATCAACGCGCTGGTGCATATACTCTGCAGTCGCGCTAGCCCCTTGGGAGTAGTTAAGCCGGGTAGCACTCTAGGGCATAGACGCCCAATCTGTTACACTTTTGGAACAGTTTTTTGATGAgaa                                                  >  2:3231896/1‑138 (MQ=255)

                                                                                       tgatgaAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCAtt                                            >  1:1941540/1‑140 (MQ=255)

                                                                                        gatgaAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTg                                           <  2:4585837/140‑1 (MQ=255)

                                                                                         atgaAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCGAGTGGGAGTAGTTATGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTga                                          <  2:1362636/140‑1 (MQ=255)

                                                                                           gaAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTgaga                                        <  1:4128087/140‑1 (MQ=255)

                                                                                                  aTCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGa                                 <  2:4312593/140‑1 (MQ=255)

                                                                                                  aTCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGACATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGa                                 <  1:4230676/140‑1 (MQ=255)

                                                                                                   tCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGAt                                >  2:4408151/1‑140 (MQ=255)

                                                                                                   tCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGAt                                >  2:932867/1‑140 (MQ=255)

                                                                                                   tCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGAt                                <  1:2552249/140‑1 (MQ=255)

                                                                                                   tCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGAt                                >  1:581136/1‑140 (MQ=255)

                                                                                                   tCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGAt                                <  2:2243412/140‑1 (MQ=255)

                                                                                                   tCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGAt                                >  2:1753998/1‑140 (MQ=255)

                                                                                                   tCAACGCGATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATGTTTTGATGAGCAGGCATTGAGATGGTGGAt                                <  2:4381200/140‑1 (MQ=255)

                                                                                                       cgcgATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGGGTAGTTAAGCCGGGTAGAAATGTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGt                            >  2:3796403/1‑140 (MQ=255)

                                                                                                       cgcgATGATGAATATAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGt                            >  1:733385/1‑140 (MQ=255)

                                                                                                        gcgATGATGAATATAATCAGCGGTCGCGCTAGCCCATTTGGAGTAGTGAAGTCGGGTAGAAATCTAGTGCATCGACGCCCAATCTGTTTCACTTCTTGAACAATTGTTTTATGAGCAGGCATTGAAATGGTGGATATGTc                           >  2:1503982/1‑140 (MQ=255)

                                                                                                                  atatAATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAacg                 >  2:259787/1‑140 (MQ=255)

                                                                                                                   tataATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAacga                >  1:2476023/1‑140 (MQ=255)

                                                                                                                    ataATCAGCAGTCGCGATAGCCCATGGGGAGTAGTTAAGCCGGGGAGAAAGGTAGTGCATCGTCGCCCAATCTGTTAAACTTCTGGAACAATTTTTTGATGAGCAGGCATTGTGATGGTGGATAAGTCACAAGAAaagac               >  2:841597/1‑140 (MQ=255)

                                                                                                                     taATCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAacgacg              <  1:212587/140‑1 (MQ=255)

                                                                                                                      aaTCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAGTCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCGTTGAGATGGTGGATAAGTCACAAGAAACGACGc             >  2:4245591/1‑140 (MQ=255)

                                                                                                                       aTCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCa            <  1:3771242/140‑1 (MQ=255)

                                                                                                                        tCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCAc           >  2:1308989/1‑140 (MQ=255)

                                                                                                                        tCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCAc           >  1:5003478/1‑140 (MQ=255)

                                                                                                                        tCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCAc           >  2:523837/1‑140 (MQ=255)

                                                                                                                        tCAGCAGTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCAc           >  1:2714914/1‑140 (MQ=255)

                                                                                                                        tCAGCAGTCGCGCTAGCCCAGTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGACATTGAGATGGTGGATAAGTCACAAGAAACGACGCAc           >  2:1479864/1‑140 (MQ=255)

                                                                                                                         cagcagTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCCACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACt          <  1:3809711/140‑1 (MQ=255)

                                                                                                                           gcagTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACttt        >  1:2048248/1‑140 (MQ=255)

                                                                                                                           gcagTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACttt        <  1:448218/140‑1 (MQ=255)

                                                                                                                           gcagTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACttt        >  1:943526/1‑140 (MQ=255)

                                                                                                                           gcagTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCAGTGAGATGGTGGATAAGTCACAAGAAACGACGCACttt        >  2:2309695/1‑140 (MQ=255)

                                                                                                                              gTCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGt     >  2:2908187/1‑140 (MQ=255)

                                                                                                                               tCGCGCTAGCCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGtt    >  1:4850810/1‑140 (MQ=255)

TAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAACCCATTGGGAGTAGTTAAGCCGGGTAGAAATCTAGGGCATCGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTT  >  NZ_CP025268/4020547‑4020815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`