| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 4,492,056 | T→C | *333* (TAA→TAG) | idnR ← | DNA‑binding transcriptional regulator IdnR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,492,056 | 0 | T | C | 99.7% | 1019.8 / NA | 307 | *333* (TAA→TAG) | idnR | DNA‑binding transcriptional regulator IdnR |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (181/124); minor base A (1/0); total (182/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 307 total aligned reads displayed.
CAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCG > NZ_CP025268/4491936‑4492191 | cagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCgt > 1:5168151‑M2/118‑140 (MQ=255) taaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGtt > 1:1110178‑M2/115‑140 (MQ=255) taaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGtt > 2:1692818‑M2/115‑140 (MQ=255) taaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGtt > 1:5013624‑M2/115‑140 (MQ=255) aaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGc < 1:3304106‑M2/28‑1 (MQ=255) aaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGcc < 2:1053617‑M2/29‑1 (MQ=255) gttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGAt < 1:2613877‑M2/34‑1 (MQ=255) ttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATa < 1:2213062‑M2/35‑1 (MQ=255) tctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggctaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa > 2:1719756‑M2/105‑140 (MQ=255) tctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa > 1:603164‑M2/105‑140 (MQ=255) tctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa > 1:4919886‑M2/105‑140 (MQ=255) tctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa > 1:4475343‑M2/105‑140 (MQ=255) tctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa < 1:4072841‑M2/36‑1 (MQ=255) tctgtgtccggcgtgcgggaaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa < 1:3089487‑M2/36‑1 (MQ=255) ggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAc < 1:2819711‑M2/45‑1 (MQ=255) ggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAc > 1:5343455‑M2/96‑140 (MQ=255) cgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTTATAccc < 2:5332150‑M2/47‑1 (MQ=255) cgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAccc > 2:3553354‑M2/94‑140 (MQ=255) gcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAg > 2:674320‑M2/91‑140 (MQ=255) gcgcgcaattaacaggtgttcactcatgatatatccaccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAATAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAg < 2:4407472‑M2/50‑1 (MQ=255) gggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGt > 2:4455121‑M2/89‑140 (MQ=255) gggcaaagaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGt < 2:3189471‑M2/52‑1 (MQ=255) caattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa < 2:1349725‑M2/55‑1 (MQ=255) caattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa < 1:4030301‑M2/55‑1 (MQ=255) caattaacaggggttcactcatgagatagcctccagttccctgcctggagtataggcaacgtccggcaaagaggatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa < 2:2313125‑M2/55‑1 (MQ=255) caattaacaggggttcactaattagatatcctccagtttcccgccttgagtatagtcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATACCGTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa < 2:2035297‑M2/55‑1 (MQ=255) aattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAAc < 2:4105165‑M2/56‑1 (MQ=255) ttaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAg < 2:1851997‑M2/58‑1 (MQ=255) ttaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAg < 1:3581671‑M2/58‑1 (MQ=255) ttAACAGGGGTTCCCTCATGAGAGATCCTCCAGTTTCCTGCCTGGAGTATTGGCCACGTCCGGCAAAGGGAATACGGGTAAAGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAGATCTGATAACCGAGGTCAACAg < 2:1204520/140‑1 (MQ=255) caggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGtgtt < 2:2886752‑M2/62‑1 (MQ=255) aggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGtgttg > 1:2048646‑M2/78‑140 (MQ=255) ggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGtgttgt > 2:1535087‑M2/77‑140 (MQ=255) ttcactcatgagatatcctccagtttccttcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAAACTAAAGCGTGGTGCCGTGATAAATATGATACCCGAGGTCAACAgtgttttggat > 2:3303659‑M2/73‑138 (MQ=255) ttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt > 1:2478263‑M2/73‑140 (MQ=255) ttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt > 2:560558‑M2/73‑140 (MQ=255) ttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt > 1:2360667‑M2/73‑140 (MQ=255) ttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt > 1:1943470‑M2/73‑140 (MQ=255) ttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt > 2:422562‑M2/73‑140 (MQ=255) ttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGGCAACAGTgttgtggtt > 1:295062‑M2/73‑140 (MQ=255) cactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggttgt > 1:462807‑M2/71‑140 (MQ=255) atgagatctcctccagtttcctgcctggagtataggcaacgtcctgcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTTCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCg < 2:2372183‑M2/75‑1 (MQ=255) atgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCg > 1:1178014‑M2/66‑140 (MQ=255) gagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGtt > 2:5232773‑M2/64‑140 (MQ=255) atatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAtt > 2:3403881‑M2/61‑140 (MQ=255) tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt > 1:2124435‑M2/58‑140 (MQ=255) tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt > 2:2243829‑M2/58‑140 (MQ=255) tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt > 1:4725389‑M2/58‑140 (MQ=255) tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt > 1:2728228‑M2/58‑140 (MQ=255) tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGGTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt > 1:4415326‑M2/58‑140 (MQ=255) ctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTaa > 2:2597022‑M2/56‑140 (MQ=255) ctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTaa > 1:2883564‑M2/56‑140 (MQ=255) ccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAAtt > 2:159349‑M2/54‑140 (MQ=255) gtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTg > 1:3479856‑M2/51‑140 (MQ=255) gtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTg < 2:5067918‑M2/90‑1 (MQ=255) tcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTc > 1:3554193‑M2/48‑140 (MQ=255) tcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTc > 1:1260820‑M2/48‑140 (MQ=255) tgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAg < 2:2509073‑M2/58‑1 (MQ=255) tgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGc > 1:4298329‑M2/45‑140 (MQ=255) taggcaaagtccggcaaagagaatacgtggaatGAAGAGAAAATAACCGAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGCTCGTTATTTTTAATTTTGCTCAGCAACATTTGggc > 2:4748294‑M2/34‑140 (MQ=255) aggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcg > 2:3460575‑M2/33‑140 (MQ=255) aggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcg < 2:4651051‑M2/108‑1 (MQ=255) ggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcgg < 1:959328‑M2/109‑1 (MQ=255) gcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcggc > 2:4352600‑M2/31‑140 (MQ=255) aacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCa > 1:1803398‑M2/29‑140 (MQ=255) acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCACCAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTTCACAGCAACATTTGGGCGGCCAt > 1:829345‑M2/28‑140 (MQ=255) acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt > 1:106086‑M2/28‑140 (MQ=255) acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt > 1:1371928‑M2/28‑140 (MQ=255) acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt > 1:2660557‑M2/28‑140 (MQ=255) acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt > 1:3743251‑M2/28‑140 (MQ=255) acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGAGTGTGGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGATCAGCAACATTTGGGCGGCCAt > 2:2953140‑M2/28‑140 (MQ=255) cgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGCTCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATc > 2:4564898‑M2/27‑140 (MQ=255) gtgcggcaaatcgaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGGCGTGACAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCCATATTTGGGCGGCCATcc > 2:3811794‑M2/26‑140 (MQ=255) gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTGAACAGTGTTTTGGTTGTGATCGTTATTTTTAATTTTTCGCAGCAACATTTGGGCGGCCATcc > 2:496320‑M2/26‑140 (MQ=255) gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATcc > 2:827607‑M2/26‑140 (MQ=255) gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATcc > 2:270459‑M2/26‑140 (MQ=255) gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATcc > 1:2073978‑M2/26‑140 (MQ=255) gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGGCAACAGGGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATcc > 2:2111440‑M2/26‑140 (MQ=255) ggcaaagagaataggtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGGGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAcc < 2:2291989‑M2/119‑1 (MQ=255) ggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAcc < 2:2434796‑M2/119‑1 (MQ=255) ggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAcc < 2:1183907‑M2/119‑1 (MQ=255) caaagagaatacgtgtaatGAAGAGAAAATAACCGAAAGCGTGTTGCCGTGATAAATCTGTGACCCGAGGTCAACAGGGTTGTGGGTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCaa < 2:4053828‑M2/121‑1 (MQ=255) aagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAata < 1:3250107‑M2/123‑1 (MQ=255) atgcgtgtaatTAAGATAAAATACCCTAAAGCGTGGTGCCGGGATCATTCTGATACCCGAGTTCACCAGTGTTTTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCaaaa < 2:2184536‑M2/129‑1 (MQ=255) atacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCaaaa < 2:1506170‑M2/129‑1 (MQ=255) atacgtgtaatGAAGAGAAAATAACCGAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCaaaa < 1:101509‑M2/129‑1 (MQ=255) gtaatGAAGAGAAAATAACCTAAAGCGTGTTGCAGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGa > 2:4299551‑M2/6‑140 (MQ=255) taatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGGGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTTGGCGGCCATCGGACCAATATCAAAACGGGGAg > 2:1969590‑M2/5‑140 (MQ=255) atGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTa > 2:4002646‑M2/3‑140 (MQ=255) atGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTa > 1:4692786‑M2/3‑140 (MQ=255) aagaagagcaAATAACCAAAAGCGTGTTGCCGTGATAAATCAGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTCGGCGGCCATCCGACCAATATCAAAACAGGGAGTa > 2:5128925/2‑140 (MQ=255) agagaaAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTa > 2:1144662/1‑140 (MQ=255) agagaaAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACAAATATCAAAACGGGGAGTAATTa > 2:2623661/1‑140 (MQ=255) gagaaAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGGGGCCATCCGACCAATATCAAAACGGGGAGTAATTAc > 1:5278841/1‑140 (MQ=255) gagaaAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACggg < 1:3668451/130‑1 (MQ=255) gagaaAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACggg > 2:3668451/1‑130 (MQ=255) aaaaTAACCTAAAGCGTGTTGCCGTGATAAATCTGATATCTGAGGTCAACAGTTTTGTGGTTTGTAGCGTTATTTTTAATTGTGCTCAGCAACATTTGGGCGGCCTTCGGACCATTATCAAGTCGGGGAGTAATTGCGCt > 2:486307/1‑140 (MQ=255) aaaaTAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCt > 1:5117918/1‑140 (MQ=255) aTAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGGGGTGTGGTTGTGATCGTTATGTTGAATTTGGCTCAGCAACATTTGGGCGGACATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGc < 1:2290426/140‑1 (MQ=255) tAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCg < 2:1104629/140‑1 (MQ=255) | CAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAG‑‑‑‑‑‑‑‑‑‑‑AGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCG > NZ_CP025268/4491936‑4492191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |