Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,995,413 IS5 (–) +4 bp intergenic (‑54/‑239) uvrY ← / → yecU DNA‑binding transcriptional activator UvrY/protein YecU

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1427599 =NA (NA)513 (1.250) 163/188 0.0 100% noncoding (1196/1196 nt) IS5 repeat region
?NC_000913 = 1995416 0 (0.000)intergenic (‑57/‑239) uvrY/yecU DNA‑binding transcriptional activator UvrY/protein YecU
* ? NC_000913 = 1428794NA (NA)518 (1.230) 169/192 0.0 100% noncoding (1/1196 nt) IS5 repeat region
?NC_000913 1995413 = 0 (0.000)intergenic (‑54/‑242) uvrY/yecU DNA‑binding transcriptional activator UvrY/protein YecU

Only 100 of 518 total aligned reads displayed.

TATCGGCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1428699‑1428794
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCAC  >  NC_000913/1995413‑1995508
                                                                                                                                                                                                
TATCGGCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCT                                                                                                 >  1:19053025/1‑97
  TCGGCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTA                                                                                               <  1:12176961/97‑1
  TCGGCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTA                                                                                               <  1:12288422/97‑1
   CGGCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAG                                                                                              >  1:19467837/1‑97
    GGCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGC                                                                                             >  1:17598159/1‑97
     GCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCG                                                                                            <  1:20412579/97‑1
     GCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCG                                                                                            <  1:12421270/97‑1
       GAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGT                                                                                          <  1:15715723/97‑1
       GAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGT                                                                                          >  1:16624234/1‑97
         AGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTT                                                                                        <  1:8044033/97‑1
         AGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTT                                                                                        >  1:2806150/1‑97
          GGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTT                                                                                       <  1:15491694/97‑1
              AGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATT                                                                                   <  1:19762654/97‑1
              AGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATT                                                                                   <  1:1817453/97‑1
              AGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATT                                                                                   >  1:16538221/1‑97
               GTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTG                                                                                  <  1:9045490/97‑1
                TTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGC                                                                                 <  1:10694033/97‑1
                TTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGC                                                                                 <  1:1411024/97‑1
                 TGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCCCCTTCCTTAGCGGTTTTTATTGCA                                                                                >  1:9837148/1‑97
                 TGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCA                                                                                <  1:4663058/97‑1
                  GATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAn                                                                               <  1:18454479/97‑2
                  GATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAA                                                                               >  1:493480/1‑97
                   ATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCCAC                                                                              >  1:17424943/1‑97
                      GCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTT                                                                           <  1:16785506/97‑1
                       CTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTG                                                                          <  1:18327589/97‑1
                       CTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTG                                                                          >  1:1271175/1‑97
                        TCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGA                                                                         >  1:13010551/1‑97
                        TCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGA                                                                         <  1:12001196/97‑1
                        TCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGA                                                                         >  1:15951042/1‑97
                           TGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAAC                                                                      >  1:10084299/1‑97
                             ATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGT                                                                    >  1:19357312/1‑97
                             ATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGT                                                                    <  1:6598861/97‑1
                              TGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTT                                                                   <  1:3635055/97‑1
                                 CCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAA                                                                <  1:4110575/97‑1
                                 CCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAA                                                                <  1:13560969/97‑1
                                 CCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAA                                                                >  1:11836414/1‑97
                                   CTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAA                                                              >  1:17240112/1‑97
                                   CTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAA                                                              <  1:10000492/97‑1
                                    TCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAAT                                                             <  1:1477989/97‑1
                                     CTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATG                                                            >  1:11607248/1‑97
                                       GGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGT                                                          <  1:17049333/97‑1
                                         GATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGG                                                        >  1:594134/1‑97
                                          ATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGG                                                       <  1:5111903/97‑1
                                              GCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATT                                                   >  1:6264979/1‑97
                                               CTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTC                                                  <  1:3774689/97‑1
                                                TCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCG                                                 <  1:2389508/97‑1
                                                 CCGGATGAATATGATGATCTCATATCAGGAACTTGTACGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGA                                                >  1:19866366/1‑97
                                                  CGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGGATTCGAT                                               >  1:11536305/1‑97
                                                    GATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGTAGGGGATTCGATTT                                             >  1:20067820/1‑97
                                                    GATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTT                                             >  1:7223567/1‑97
                                                     ATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTT                                            <  1:12905871/97‑1
                                                       GAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTC                                          >  1:8805422/1‑97
                                                       GAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTC                                          >  1:824373/1‑97
                                                        AATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCT                                         >  1:11127475/1‑97
                                                        AATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCT                                         >  1:13093881/1‑97
                                                         ATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTC                                        >  1:2220522/1‑97
                                                           ATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTC                                      >  1:14418814/1‑97
                                                           ATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTC                                      >  1:7420169/1‑97
                                                             GATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGT                                    >  1:4745619/1‑97
                                                              ATGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTT                                   <  1:15344378/97‑1
                                                               TGATCTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTT                                  <  1:1077374/97‑1
                                                                   CTCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGT                              <  1:16114820/97‑1
                                                                    TCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTC                             >  1:9182144/1‑97
                                                                    TCATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTC                             <  1:8345173/97‑1
                                                                     CATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCA                            >  1:3972687/1‑97
                                                                     CATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCA                            <  1:9641776/97‑1
                                                                      ATATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAA                           >  1:15134706/1‑97
                                                                       TATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAAT                          >  1:13330477/1‑97
                                                                       TATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAAT                          <  1:3416981/97‑1
                                                                        ATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATT                         <  1:3239921/97‑1
                                                                        ATCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATT                         >  1:20724354/1‑97
                                                                         TCAGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTC                        <  1:10579726/97‑1
                                                                           AGGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGA                      >  1:15633835/1‑97
                                                                            GGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGAT                     >  1:859489/1‑97
                                                                            GGAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGAT                     <  1:9362346/97‑1
                                                                             GAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATT                    >  1:5247187/1‑97
                                                                             GAACTTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATT                    <  1:6086889/97‑1
                                                                                 TTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCC                >  1:10476637/1‑97
                                                                                 TTGTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCC                >  1:3052354/1‑97
                                                                                   GTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCAC              <  1:13947916/97‑1
                                                                                   GTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCAC              >  1:5676894/1‑97
                                                                                   GTTCGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCAC              <  1:11331043/97‑1
                                                                                      CGCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGT           >  1:7822534/1‑97
                                                                                       GCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTT          >  1:14644415/1‑97
                                                                                       GCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTT          >  1:1871153/1‑97
                                                                                       GCACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTT          <  1:7632883/97‑1
                                                                                        CACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTA         >  1:17822825/1‑97
                                                                                         ACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTAT        <  1:4315835/97‑1
                                                                                         ACCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTAT        >  1:19245957/1‑97
                                                                                          CCTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATG       >  1:20952909/1‑97
                                                                                           CTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGG      >  1:14945960/1‑97
                                                                                           CTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGG      >  1:7039409/1‑97
                                                                                           CTTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGG      <  1:17294703/97‑1
                                                                                            TTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGT     <  1:1253756/97‑1
                                                                                            TTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGT     <  1:20257017/97‑1
                                                                                            TTCCTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGT     >  1:3877925/1‑97
                                                                                               CTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCAC  >  1:16370372/1‑97
                                                                                               CTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCAC  <  1:8722569/97‑1
                                                                                               CTTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCAC  >  1:20545077/1‑97
                                                                                               CTTAGCGGCTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGGATTCGCTTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCAC  >  1:13809348/1‑97
                                                                                                                                                                                                
TATCGGCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGGGATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1428699‑1428794
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCAC  >  NC_000913/1995413‑1995508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.