Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,739,5640TG38.6% 551.8 / 68.5 254T79P (ACC→CCC) punRDNA‑binding transcriptional activator PunR
Reads supporting (aligned to +/- strand):  ref base T (37/119);  new base G (98/0);  total (135/119)
Fisher's exact test for biased strand distribution p-value = 1.35e-39
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 301 total aligned reads displayed.

TCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGG  >  NC_000913/1739471‑1739660
                                                                                             |                                                                                                
tcTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTggt                                                                                               >  1:20821536/1‑95 (MQ=255)
  tGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCt                                                                                             >  1:15534590/1‑97 (MQ=255)
     cGTGTACGTTGTGCCCTAAAAATATTATCCCCTGCGATAGCTAACTGCCCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCa                                                                                          <  1:17647245/97‑1 (MQ=255)
     cGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTggg                                                                                          >  1:11592393/1‑95 (MQ=255)
       tgtCCGTTCGGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCAtt                                                                                        <  1:20548796/97‑1 (MQ=255)
       tgtACTTTCGGCCCTGAAAATATTATCCACTGCGATAGCTAACTGCCCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCAtt                                                                                        <  1:17171693/97‑1 (MQ=255)
       tgtACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCCGCAtt                                                                                        >  1:13315343/1‑97 (MQ=255)
        ttACTTTCTGCCTTGAAAATATTACCCACTGCGATAGCTACCTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCAttt                                                                                       <  1:136277/96‑1 (MQ=255)
         tccGTTCTGCCTTGACAATTTTATCCACTGCGATAGCTAACTGCCCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCAtttt                                                                                      <  1:14889771/95‑1 (MQ=255)
          actttCGGGCCTGACAATTTTACCCCCTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCAttttt                                                                                     <  1:14664937/94‑1 (MQ=255)
            gTTCTGGCCTGACAATATTATCCACGGCGATAGCTAACTGCCCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCAttttttt                                                                                   <  1:17216198/97‑1 (MQ=255)
             ttCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGGTCTGCCtttttttt                                                                                  >  1:13383188/1‑96 (MQ=255)
               cTGCCCTGCAAATTTTACCCACTGCGATAGCTACCGGCCCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGac                                                                                <  1:4332084/97‑1 (MQ=255)
                tGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCAtttttttttca                                                                               >  1:1745433/1‑93 (MQ=255)
                tGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTTaca                                                                               >  1:3794304/1‑97 (MQ=255)
                   ccTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGGATTTTTTTGacaaca                                                                            >  1:21052007/1‑97 (MQ=255)
                   ccTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGacaaca                                                                            >  1:5165257/1‑97 (MQ=255)
                   ccTAACATTTTTATCCCCGGCAATAGCTACCTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGacaaca                                                                            <  1:5641498/97‑1 (MQ=255)
                    cTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTTacaacac                                                                           >  1:8389014/1‑96 (MQ=255)
                         aaTATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGGGCGGCAGTTTTTTTACAACAGAgagc                                                                      >  1:14461291/1‑97 (MQ=255)
                         aaTATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAgcgc                                                                      >  1:7824246/1‑97 (MQ=255)
                         aaTATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGAAAACAAAgcgc                                                                      >  1:9067241/1‑97 (MQ=255)
                          atatTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTTCCTTTTTTTTGCAACAAAGCGcc                                                                     >  1:1851324/1‑97 (MQ=255)
                             ttatCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGcccct                                                                  >  1:8124685/1‑95 (MQ=255)
                             ttatCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTTTGCATTTTTTTTACAACAAAGAGCCctt                                                                  >  1:6249202/1‑97 (MQ=255)
                             ttatCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATTTGCATTTTTTTTACAACAGAGCGcccct                                                                  >  1:7610288/1‑95 (MQ=255)
                              tatCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTGACAAAAGAGCGCCcttc                                                                 >  1:3216355/1‑97 (MQ=255)
                                tCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTTACAACAAAGCGCCcttctt                                                               >  1:11884377/1‑97 (MQ=255)
                                cccccTGCAATAGCTACCTGCCCGCCCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCcttctt                                                               <  1:275266/93‑1 (MQ=255)
                                 ccccTGCGATAGCTACCTGCCCGCCCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCttt                                                              <  1:20508050/94‑1 (MQ=255)
                                 ccACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCttt                                                              >  1:10054550/1‑97 (MQ=255)
                                  cccTGCGATACCAACCTGCCCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTg                                                             <  1:10744014/95‑1 (MQ=255)
                                  cACTGCGATGCCTACCGGCCCGCCCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTg                                                             <  1:11672445/97‑1 (MQ=255)
                                  cACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGTTCTGCATTTTTTTGATACAAGAGGGGCCTTCTTTg                                                             >  1:15603951/1‑97 (MQ=255)
                                  cACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTg                                                             >  1:20226007/1‑97 (MQ=255)
                                   aCTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTTACAACAGCGCGCCCTTCtttta                                                            >  1:4228167/1‑95 (MQ=255)
                                       cGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGaaa                                                        >  1:17340305/1‑97 (MQ=255)
                                        ggtAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGTTCTGCATTTTTTTGACAACCAAGCGCCCTTCTTTTAGaaaa                                                       >  1:2218131/3‑96 (MQ=255)
                                        gATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTTCATTTTTTTGACCACAAAATGCCCTTTTTTGTGGAAc                                                       >  1:6822995/1‑97 (MQ=255)
                                        gATACCTACCTGCCCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAAc                                                       <  1:383923/97‑1 (MQ=255)
                                         aTAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGaaaac                                                      >  1:1531051/1‑95 (MQ=255)
                                           aGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCCTTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCAc                                                    >  1:14000193/1‑97 (MQ=255)
                                           aGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCCTTTTTTTGACAACACAGCGCCCTTCTTTGAGAAAacac                                                    >  1:6290611/1‑97 (MQ=255)
                                           aGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAAcccc                                                    >  1:5397497/1‑95 (MQ=255)
                                            gCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCCTTTTTTTTACAACAGAGCGCCCTTCTTTGAGAAACCAcc                                                   >  1:12010090/1‑96 (MQ=255)
                                            gCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAAACACg                                                   >  1:16110101/1‑97 (MQ=255)
                                             cTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGc                                                  >  1:6531619/1‑97 (MQ=255)
                                              tAACTGCCCGCCCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCt                                                 <  1:11430730/97‑1 (MQ=255)
                                              tAACTGCCCCCCCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCt                                                 <  1:11196192/97‑1 (MQ=255)
                                              tAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTTACAACAGAGCGCCCTTCTTTTAGCAAACACGCt                                                 >  1:16887934/1‑97 (MQ=255)
                                               aaCTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTTACAACAGAGCGCCCTTCTTTGAGAAACCACGCTc                                                >  1:17906403/1‑97 (MQ=255)
                                                ccggACCGCCCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTcc                                               <  1:4066345/94‑1 (MQ=255)
                                                aCTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTcc                                               >  1:8850891/1‑97 (MQ=255)
                                                 tggcccGCCCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCca                                              <  1:4852288/93‑1 (MQ=255)
                                                 cTGGCCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCca                                              <  1:1979301/97‑1 (MQ=255)
                                                 cTGCCCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCca                                              <  1:6980788/97‑1 (MQ=255)
                                                  tgcccGCCCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCcag                                             <  1:19027013/94‑1 (MQ=255)
                                                   gcccGCCCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCcagc                                            <  1:5834848/95‑1 (MQ=255)
                                                   gACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTTAGAAAACACGCTCcagc                                            >  1:12975762/1‑97 (MQ=255)
                                                     ccccgcCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCcagcag                                          <  1:3936871/94‑1 (MQ=255)
                                                       gctccAGCCGTTCCCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCg                                        <  1:20078080/94‑1 (MQ=255)
                                                       gcgcCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCg                                        <  1:5972539/97‑1 (MQ=255)
                                                       cccccAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCg                                        <  1:18320418/94‑1 (MQ=255)
                                                         gcCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAAACACGCTCCAGCCGCggg                                      >  1:17227204/1‑96 (MQ=255)
                                                          ccAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTc                                     <  1:19957456/97‑1 (MQ=255)
                                                          ccAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTc                                     >  1:3331883/1‑97 (MQ=255)
                                                          ccAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTc                                     <  1:19240458/97‑1 (MQ=255)
                                                           cggCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCCGCGGTCa                                    >  1:8191685/3‑97 (MQ=255)
                                                             gCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGc                                  <  1:8667109/97‑1 (MQ=255)
                                                                gTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTcc                               <  1:111474/97‑1 (MQ=255)
                                                                gTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTcc                               <  1:19614368/97‑1 (MQ=255)
                                                                 ttCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCca                              <  1:1530257/97‑1 (MQ=255)
                                                                    gCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACAt                           >  1:9348636/1‑97 (MQ=255)
                                                                     cTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCCCATc                          >  1:10906313/1‑97 (MQ=255)
                                                                      tATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCa                         <  1:2598763/97‑1 (MQ=255)
                                                                      tATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGGCAGCTCCccacca                         >  1:8024346/1‑97 (MQ=255)
                                                                      tATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCa                         >  1:18274731/1‑97 (MQ=255)
                                                                       aTCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCAc                        >  1:15430184/1‑97 (MQ=255)
                                                                        tCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACg                       <  1:6575037/97‑1 (MQ=255)
                                                                        tCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACCTCACg                       >  1:12773845/1‑97 (MQ=255)
                                                                            ctgACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGc                   <  1:4687516/97‑1 (MQ=255)
                                                                             tgACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGcc                  <  1:19487172/97‑1 (MQ=255)
                                                                              gACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCcg                 >  1:10215528/1‑97 (MQ=255)
                                                                              gACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTggcc                 >  1:125014/1‑94 (MQ=255)
                                                                                cATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCcgtc               <  1:10518851/97‑1 (MQ=255)
                                                                                cATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCcgtc               <  1:7231246/97‑1 (MQ=255)
                                                                                cATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCcgtc               >  1:7479226/1‑97 (MQ=255)
                                                                                   tGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCcgtcgtn            <  1:16485348/97‑2 (MQ=255)
                                                                                   tGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGtt            >  1:9766971/1‑97 (MQ=255)
                                                                                    gCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTc           <  1:1593195/97‑1 (MQ=255)
                                                                                      tGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCaa         >  1:287398/1‑97 (MQ=255)
                                                                                      tGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCaa         >  1:5304894/1‑97 (MQ=255)
                                                                                         cGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAaga      <  1:3564397/97‑1 (MQ=255)
                                                                                         cGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAaga      <  1:13137074/97‑1 (MQ=255)
                                                                                         cGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAaga      >  1:4520152/1‑97 (MQ=255)
                                                                                         cGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAaga      <  1:12191658/97‑1 (MQ=255)
                                                                                          gggTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAagag     >  1:20910224/1‑97 (MQ=255)
                                                                                          gggTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAagag     >  1:6740412/1‑97 (MQ=255)
                                                                                             tGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCgg  >  1:14829910/1‑97 (MQ=255)
                                                                                             tGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCgg  >  1:12445883/1‑97 (MQ=255)
                                                                                             |                                                                                                
TCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTTGAGAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGG  >  NC_000913/1739471‑1739660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑